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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3132890 |
| Transcript ID | Lj3g3v3132890.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: receptor-like protein kinase HERK 1-like [Glycine max] gi|356542591|ref|XP_003539750.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 6 | 6 | – | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| SignalP | 1 | 24 | 24 | – | – | |
| Phobius | 1 | 23 | 23 | – | – | |
| SignalP | 1 | 23 | 23 | – | – | |
| PANTHER | 7 | 615 | 609 | 0 | – | |
| Phobius | 7 | 18 | 12 | – | – | |
| PANTHER | 7 | 615 | 609 | 0 | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| Phobius | 19 | 23 | 5 | – | – | |
| Phobius | 24 | 413 | 390 | – | – | |
| Pfam | 35 | 386 | 352 | 6.50E-42 | ||
| Gene3D | 396 | 505 | 110 | 7.50E-11 | ||
| Phobius | 414 | 437 | 24 | – | – | |
| TMHMM | 414 | 436 | 23 | – | – | |
| Phobius | 438 | 615 | 178 | – | – | |
| SUPERFAMILY | 482 | 611 | 130 | 3.60E-34 | ||
| SMART | 498 | 614 | 117 | 0.0064 | ||
| ProSiteProfiles | 498 | 615 | 118 | 16.358 | ||
| Pfam | 503 | 612 | 110 | 8.10E-20 | ||
| ProSitePatterns | 504 | 526 | 23 | – | ||
| Gene3D | 506 | 559 | 54 | 1.20E-27 | – | |
| Gene3D | 560 | 611 | 52 | 3.60E-10 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein tyrosine kinase activity | Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj3g3v3132890.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3132890.1, powered by CORGI.
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