Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR024954
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 11 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.544s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0116189.1
n.a. PREDICTED: FACT complex subunit SSRP1-like [Glycine max] gi|356496334|ref|XP_003517023.1| chr0 51088942 51090930 +
2 domain predictions
 –
Lj0g3v0332269.2
n.a. PREDICTED: FACT complex subunit SSRP1-like [Glycine max] gi|356496334|ref|XP_003517023.1| chr0 173831127 173836206 -
2 domain predictions
 –
Lj1g3v3556890.1
n.a. PREDICTED: FACT complex subunit SSRP1-like [Glycine max] gi|356496334|ref|XP_003517023.1| chr1 40816588 40820377 +
2 domain predictions
 –
Lj2g3v1034620.1
n.a. PREDICTED: FACT complex subunit SSRP1-like [Glycine max] gi|356496334|ref|XP_003517023.1| chr2 16549598 16554927 -
2 domain predictions
 –
LotjaGi2g1v0081600.1
n.a. FACT complex subunit SSRP1; TAIR: AT3G28730.1 high mobility group; Swiss-Prot: sp|O04235|SSRP1_VICFA FACT complex subunit SSRP1; TrEMBL-Plants: tr|I1J7R6|I1J7R6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0081600 LjG1.1_chr2 22249439 22255186 +
2 domain predictions
 –
LotjaGi2g1v0081600.2
n.a. FACT complex subunit SSRP1; TAIR: AT3G28730.1 high mobility group; Swiss-Prot: sp|O04235|SSRP1_VICFA FACT complex subunit SSRP1; TrEMBL-Plants: tr|A0A0L9VP68|A0A0L9VP68_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0081600 LjG1.1_chr2 22249879 22253455 +
2 domain predictions
 –
LotjaGi2g1v0081600.3
n.a. FACT complex subunit SSRP1; TAIR: AT3G28730.1 high mobility group; Swiss-Prot: sp|O04235|SSRP1_VICFA FACT complex subunit SSRP1; TrEMBL-Plants: tr|I1J7R6|I1J7R6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0081600 LjG1.1_chr2 22249879 22254544 +
2 domain predictions
 –
LotjaGi2g1v0256800.1
n.a. FACT complex subunit SSRP1; TAIR: AT3G28730.1 high mobility group; Swiss-Prot: sp|O04235|SSRP1_VICFA FACT complex subunit SSRP1; TrEMBL-Plants: tr|I1J7R6|I1J7R6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0256800 LjG1.1_chr2 72298284 72304237 -
2 domain predictions
 –
LotjaGi2g1v0256800.2
n.a. FACT complex subunit SSRP1; TAIR: AT3G28730.1 high mobility group; Swiss-Prot: sp|O04235|SSRP1_VICFA FACT complex subunit SSRP1; TrEMBL-Plants: tr|A0A151S4Y7|A0A151S4Y7_CAJCA FACT complex subunit SSRP1; Found in the gene: LotjaGi2g1v0256800 LjG1.1_chr2 72298562 72304104 -
2 domain predictions
 –
LotjaGi2g1v0256800.3
n.a. FACT complex subunit SSRP1; TAIR: AT3G28730.1 high mobility group; Swiss-Prot: sp|O04235|SSRP1_VICFA FACT complex subunit SSRP1; TrEMBL-Plants: tr|A0A0R0KM01|A0A0R0KM01_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0256800 LjG1.1_chr2 72298894 72303480 -
2 domain predictions
 –
LotjaGi2g1v0256800.4
n.a. FACT complex subunit SSRP1; TAIR: AT3G28730.1 high mobility group; Swiss-Prot: sp|O04235|SSRP1_VICFA FACT complex subunit SSRP1; TrEMBL-Plants: tr|I1J7R6|I1J7R6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0256800 LjG1.1_chr2 72298894 72303480 -
2 domain predictions
 –