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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR039421
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We have found 82 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 5.649s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0103400.1
n.a. ABC transporter B family-like protein; TAIR: AT5G58270.1 ABC transporter of the mitochondrion 3; Swiss-Prot: sp|Q9LVM1|AB25B_ARATH ABC transporter B family member 25, mitochondrial; TrEMBL-Plants: tr|K7M8A3|K7M8A3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0103400 LjG1.1_chr1 15888368 15911573 +
2 domain predictions
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LotjaGi1g1v0103400.2
n.a. ATP-binding cassette transporter; TAIR: AT5G58270.1 ABC transporter of the mitochondrion 3; Swiss-Prot: sp|Q9LVM1|AB25B_ARATH ABC transporter B family member 25, mitochondrial; TrEMBL-Plants: tr|A0A151RLN7|A0A151RLN7_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0103400 LjG1.1_chr1 15889675 15910480 +
2 domain predictions
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LotjaGi1g1v0103400.3
n.a. ATP-binding cassette transporter; TAIR: AT5G58270.1 ABC transporter of the mitochondrion 3; Swiss-Prot: sp|Q9LVM1|AB25B_ARATH ABC transporter B family member 25, mitochondrial; TrEMBL-Plants: tr|A0A151RLN7|A0A151RLN7_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0103400 LjG1.1_chr1 15890486 15910485 +
2 domain predictions
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LotjaGi1g1v0303000.1
n.a. ABC transporter ATP-binding protein; TAIR: AT3G28860.1 ATP binding cassette subfamily B19; Swiss-Prot: sp|Q9LJX0|AB19B_ARATH ABC transporter B family member 19; TrEMBL-Plants: tr|G7J9Q4|G7J9Q4_MEDTR ABC transporter B family protein; Found in the gene: LotjaGi1g1v0303000 LjG1.1_chr1 73857564 73874393 -
2 domain predictions
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LotjaGi1g1v0303000.2
n.a. ABC transporter ATP-binding protein; TAIR: AT4G25960.1 P-glycoprotein 2; Swiss-Prot: sp|Q8LPK2|AB2B_ARATH ABC transporter B family member 2; TrEMBL-Plants: tr|A0A151SGF6|A0A151SGF6_CAJCA ABC transporter B family member 19; Found in the gene: LotjaGi1g1v0303000 LjG1.1_chr1 73860016 73863079 -
2 domain predictions
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LotjaGi1g1v0303000.3
n.a. ABC transporter ATP-binding protein; TAIR: AT3G28860.1 ATP binding cassette subfamily B19; Swiss-Prot: sp|Q9LJX0|AB19B_ARATH ABC transporter B family member 19; TrEMBL-Plants: tr|G7J9Q4|G7J9Q4_MEDTR ABC transporter B family protein; Found in the gene: LotjaGi1g1v0303000 LjG1.1_chr1 73860016 73874384 -
2 domain predictions
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LotjaGi1g1v0534000.1
n.a. ABC transporter ATP-binding protein; TAIR: AT3G55320.1 P-glycoprotein 20; Swiss-Prot: sp|Q9M3B9|AB20B_ARATH ABC transporter B family member 20; TrEMBL-Plants: tr|I1N529|I1N529_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0534000 LjG1.1_chr1 106226376 106243222 +
2 domain predictions
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LotjaGi1g1v0534000.2
n.a. ABC transporter ATP-binding protein; TAIR: AT3G55320.1 P-glycoprotein 20; Swiss-Prot: sp|Q9M3B9|AB20B_ARATH ABC transporter B family member 20; TrEMBL-Plants: tr|I1N529|I1N529_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0534000 LjG1.1_chr1 106226778 106242254 +
2 domain predictions
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LotjaGi1g1v0534000.3
n.a. ABC transporter ATP-binding protein; TAIR: AT3G55320.1 P-glycoprotein 20; Swiss-Prot: sp|Q9M3B9|AB20B_ARATH ABC transporter B family member 20; TrEMBL-Plants: tr|I1N529|I1N529_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0534000 LjG1.1_chr1 106226778 106242254 +
2 domain predictions
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LotjaGi1g1v0534000.5
n.a. ABC transporter ATP-binding protein; TAIR: AT3G55320.1 P-glycoprotein 20; Swiss-Prot: sp|Q9M3B9|AB20B_ARATH ABC transporter B family member 20; TrEMBL-Plants: tr|I1JDS0|I1JDS0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0534000 LjG1.1_chr1 106229123 106242254 +
2 domain predictions
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LotjaGi1g1v0688600.1
n.a. ABC transporter ATP-binding protein; TAIR: AT2G36910.1 ATP binding cassette subfamily B1; Swiss-Prot: sp|Q9ZR72|AB1B_ARATH ABC transporter B family member 1; TrEMBL-Plants: tr|A0A0L9TFA1|A0A0L9TFA1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0688600 LjG1.1_chr1 125595430 125604022 +
2 domain predictions
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LotjaGi1g1v0688600.2
n.a. ABC transporter ATP-binding protein; TAIR: AT2G36910.1 ATP binding cassette subfamily B1; Swiss-Prot: sp|Q9ZR72|AB1B_ARATH ABC transporter B family member 1; TrEMBL-Plants: tr|A0A0L9TFA1|A0A0L9TFA1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0688600 LjG1.1_chr1 125595971 125603537 +
2 domain predictions
 –
LotjaGi1g1v0688600.3
n.a. ABC transporter ATP-binding protein; TAIR: AT2G36910.1 ATP binding cassette subfamily B1; Swiss-Prot: sp|Q9ZR72|AB1B_ARATH ABC transporter B family member 1; TrEMBL-Plants: tr|A0A0L9TFA1|A0A0L9TFA1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0688600 LjG1.1_chr1 125595980 125603537 +
2 domain predictions
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LotjaGi1g1v0688600.4
n.a. ABC transporter ATP-binding protein; TAIR: AT2G36910.1 ATP binding cassette subfamily B1; Swiss-Prot: sp|Q9ZR72|AB1B_ARATH ABC transporter B family member 1; TrEMBL-Plants: tr|A0A0L9TFA1|A0A0L9TFA1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0688600 LjG1.1_chr1 125595980 125603537 +
2 domain predictions
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LotjaGi1g1v0688600.5
n.a. ABC transporter ATP-binding protein; TAIR: AT2G36910.1 ATP binding cassette subfamily B1; Swiss-Prot: sp|Q9ZR72|AB1B_ARATH ABC transporter B family member 1; TrEMBL-Plants: tr|A0A0L9TFA1|A0A0L9TFA1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0688600 LjG1.1_chr1 125595980 125603537 +
2 domain predictions
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LotjaGi1g1v0688600.6
n.a. ABC transporter ATP-binding protein; TAIR: AT2G36910.1 ATP binding cassette subfamily B1; Swiss-Prot: sp|Q9ZR72|AB1B_ARATH ABC transporter B family member 1; TrEMBL-Plants: tr|A0A0L9TFA1|A0A0L9TFA1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0688600 LjG1.1_chr1 125595995 125603537 +
2 domain predictions
 –
LotjaGi1g1v0688600.7
n.a. ABC transporter ATP-binding protein; TAIR: AT2G36910.1 ATP binding cassette subfamily B1; Swiss-Prot: sp|Q9ZR72|AB1B_ARATH ABC transporter B family member 1; TrEMBL-Plants: tr|A0A0L9TFA1|A0A0L9TFA1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0688600 LjG1.1_chr1 125601149 125603537 +
2 domain predictions
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LotjaGi1g1v0754800.1
n.a. ABC transporter B family protein; TAIR: AT1G02520.1 P-glycoprotein 11; Swiss-Prot: sp|Q9FWX7|AB11B_ARATH ABC transporter B family member 11; TrEMBL-Plants: tr|I7GUC2|I7GUC2_LOTJA ATP-binding cassette protein; Found in the gene: LotjaGi1g1v0754800 LjG1.1_chr1 132774713 132783949 -
2 domain predictions
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LotjaGi1g1v0754800.2
n.a. ABC transporter B family protein; TAIR: AT2G47000.1 ATP binding cassette subfamily B4; Swiss-Prot: sp|O80725|AB4B_ARATH ABC transporter B family member 4; TrEMBL-Plants: tr|I7GUC2|I7GUC2_LOTJA ATP-binding cassette protein; Found in the gene: LotjaGi1g1v0754800 LjG1.1_chr1 132774713 132794740 -
2 domain predictions
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LotjaGi1g1v0754800.3
n.a. ABC transporter B family protein; TAIR: AT2G47000.1 ATP binding cassette subfamily B4; Swiss-Prot: sp|O80725|AB4B_ARATH ABC transporter B family member 4; TrEMBL-Plants: tr|I7GUC2|I7GUC2_LOTJA ATP-binding cassette protein; Found in the gene: LotjaGi1g1v0754800 LjG1.1_chr1 132784886 132790488 -
2 domain predictions
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LotjaGi2g1v0150400.1
n.a. ABC transporter B family protein; TAIR: AT4G25450.3 non-intrinsic ABC protein 8; Swiss-Prot: sp|Q8LPQ6|AB28B_ARATH ABC transporter B family member 28; TrEMBL-Plants: tr|A0A0B2S4S1|A0A0B2S4S1_GLYSO ABC transporter B family member 28; Found in the gene: LotjaGi2g1v0150400 LjG1.1_chr2 54137142 54148680 +
2 domain predictions
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LotjaGi2g1v0150400.2
n.a. ABC transporter B family protein; TAIR: AT4G25450.1 non-intrinsic ABC protein 8; Swiss-Prot: sp|Q8LPQ6|AB28B_ARATH ABC transporter B family member 28; TrEMBL-Plants: tr|A0A0S3TB22|A0A0S3TB22_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0150400 LjG1.1_chr2 54137149 54148195 +
2 domain predictions
 –
LotjaGi2g1v0150400.3
n.a. ABC transporter B family protein; TAIR: AT4G25450.1 non-intrinsic ABC protein 8; Swiss-Prot: sp|Q8LPQ6|AB28B_ARATH ABC transporter B family member 28; TrEMBL-Plants: tr|K7LE00|K7LE00_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0150400 LjG1.1_chr2 54138585 54147756 +
2 domain predictions
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LotjaGi2g1v0150400.4
n.a. ABC transporter B family protein; TAIR: AT4G25450.3 non-intrinsic ABC protein 8; Swiss-Prot: sp|Q8LPQ6|AB28B_ARATH ABC transporter B family member 28; TrEMBL-Plants: tr|A0A0R0IFW8|A0A0R0IFW8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0150400 LjG1.1_chr2 54138950 54147756 +
2 domain predictions
 –
LotjaGi2g1v0224400.1
n.a. ABC transporter B family protein; TAIR: AT3G28345.1 ABC transporter family protein; Swiss-Prot: sp|Q9LHK4|AB8B_ARATH Putative ABC transporter B family member 8; TrEMBL-Plants: tr|A0A0B2QAY3|A0A0B2QAY3_GLYSO Putative ABC transporter B family member 8; Found in the gene: LotjaGi2g1v0224400 LjG1.1_chr2 68053597 68060335 -
2 domain predictions
 –
LotjaGi2g1v0253000.1
n.a. ABC transporter B family protein; TAIR: AT3G28345.1 ABC transporter family protein; Swiss-Prot: sp|Q9LHD1|AB15B_ARATH ABC transporter B family member 15; TrEMBL-Plants: tr|A0A0B2RQU4|A0A0B2RQU4_GLYSO ABC transporter B family member 15; Found in the gene: LotjaGi2g1v0253000 LjG1.1_chr2 71856256 71865197 -
2 domain predictions
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LotjaGi2g1v0253000.2
n.a. ABC transporter B family protein; TAIR: AT3G28345.1 ABC transporter family protein; Swiss-Prot: sp|Q9LHD1|AB15B_ARATH ABC transporter B family member 15; TrEMBL-Plants: tr|A0A0B2RQU4|A0A0B2RQU4_GLYSO ABC transporter B family member 15; Found in the gene: LotjaGi2g1v0253000 LjG1.1_chr2 71856737 71864315 -
2 domain predictions
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LotjaGi2g1v0253000.3
n.a. ABC transporter B family protein; TAIR: AT3G28345.1 ABC transporter family protein; Swiss-Prot: sp|Q9LHD1|AB15B_ARATH ABC transporter B family member 15; TrEMBL-Plants: tr|W9QZX2|W9QZX2_9ROSA ABC transporter B family member 15; Found in the gene: LotjaGi2g1v0253000 LjG1.1_chr2 71862281 71864153 -
2 domain predictions
 –
LotjaGi2g1v0253200.1
n.a. ABC transporter B family protein; TAIR: AT3G28345.1 ABC transporter family protein; Swiss-Prot: sp|Q9LHD1|AB15B_ARATH ABC transporter B family member 15; TrEMBL-Plants: tr|A0A0B2RQU4|A0A0B2RQU4_GLYSO ABC transporter B family member 15; Found in the gene: LotjaGi2g1v0253200 LjG1.1_chr2 71900751 71910585 -
2 domain predictions
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LotjaGi2g1v0253200.2
n.a. ABC transporter B family protein; TAIR: AT3G28345.1 ABC transporter family protein; Swiss-Prot: sp|Q9LHD1|AB15B_ARATH ABC transporter B family member 15; TrEMBL-Plants: tr|A0A0B2RQU4|A0A0B2RQU4_GLYSO ABC transporter B family member 15; Found in the gene: LotjaGi2g1v0253200 LjG1.1_chr2 71901390 71910253 -
2 domain predictions
 –
LotjaGi2g1v0253200.3
n.a. ABC transporter B family protein; TAIR: AT3G28380.1 P-glycoprotein 17; Swiss-Prot: sp|Q9LSJ6|AB17B_ARATH ABC transporter B family member 17; TrEMBL-Plants: tr|W9QZX2|W9QZX2_9ROSA ABC transporter B family member 15; Found in the gene: LotjaGi2g1v0253200 LjG1.1_chr2 71907056 71909539 -
2 domain predictions
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LotjaGi2g1v0258200.1
n.a. ABC transporter ATP-binding protein; TAIR: AT3G28860.1 ATP binding cassette subfamily B19; Swiss-Prot: sp|Q9LJX0|AB19B_ARATH ABC transporter B family member 19; TrEMBL-Plants: tr|A0A072U6J8|A0A072U6J8_MEDTR ABC transporter B family protein; Found in the gene: LotjaGi2g1v0258200 LjG1.1_chr2 72478020 72486822 -
2 domain predictions
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LotjaGi2g1v0258200.2
n.a. ABC transporter ATP-binding protein; TAIR: AT3G28860.1 ATP binding cassette subfamily B19; Swiss-Prot: sp|Q9LJX0|AB19B_ARATH ABC transporter B family member 19; TrEMBL-Plants: tr|I1LWJ6|I1LWJ6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0258200 LjG1.1_chr2 72478408 72484774 -
2 domain predictions
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LotjaGi2g1v0258200.3
n.a. ABC transporter ATP-binding protein; TAIR: AT3G28860.1 ATP binding cassette subfamily B19; Swiss-Prot: sp|Q9LJX0|AB19B_ARATH ABC transporter B family member 19; TrEMBL-Plants: tr|I1LWJ6|I1LWJ6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0258200 LjG1.1_chr2 72478408 72486458 -
2 domain predictions
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LotjaGi2g1v0258200.4
n.a. ABC transporter ATP-binding protein; TAIR: AT3G28860.1 ATP binding cassette subfamily B19; Swiss-Prot: sp|Q9LJX0|AB19B_ARATH ABC transporter B family member 19; TrEMBL-Plants: tr|I1LWJ6|I1LWJ6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0258200 LjG1.1_chr2 72478408 72486473 -
2 domain predictions
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LotjaGi2g1v0334800.1
n.a. ABC transporter ATP-binding protein; TAIR: AT4G25960.1 P-glycoprotein 2; Swiss-Prot: sp|Q8LPK2|AB2B_ARATH ABC transporter B family member 2; TrEMBL-Plants: tr|A0A0S3T431|A0A0S3T431_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0334800 LjG1.1_chr2 81078654 81089396 -
2 domain predictions
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LotjaGi2g1v0334800.2
n.a. ABC transporter ATP-binding protein; TAIR: AT4G25960.1 P-glycoprotein 2; Swiss-Prot: sp|Q8LPK2|AB2B_ARATH ABC transporter B family member 2; TrEMBL-Plants: tr|A0A0B2P6C0|A0A0B2P6C0_GLYSO ABC transporter B family member 2; Found in the gene: LotjaGi2g1v0334800 LjG1.1_chr2 81078852 81087600 -
2 domain predictions
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LotjaGi2g1v0334800.3
n.a. ABC transporter ATP-binding protein; TAIR: AT4G25960.1 P-glycoprotein 2; Swiss-Prot: sp|Q8LPK2|AB2B_ARATH ABC transporter B family member 2; TrEMBL-Plants: tr|A0A0S3T431|A0A0S3T431_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0334800 LjG1.1_chr2 81078852 81089678 -
2 domain predictions
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LotjaGi2g1v0334800.4
n.a. ABC transporter ATP-binding protein; TAIR: AT4G25960.1 P-glycoprotein 2; Swiss-Prot: sp|Q8LPK2|AB2B_ARATH ABC transporter B family member 2; TrEMBL-Plants: tr|A0A1J7FYB6|A0A1J7FYB6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0334800 LjG1.1_chr2 81079479 81082452 -
2 domain predictions
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LotjaGi2g1v0334800.5
n.a. ABC transporter ATP-binding protein; TAIR: AT4G25960.1 P-glycoprotein 2; Swiss-Prot: sp|Q8LPK2|AB2B_ARATH ABC transporter B family member 2; TrEMBL-Plants: tr|A0A0S3T431|A0A0S3T431_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0334800 LjG1.1_chr2 81079479 81089144 -
2 domain predictions
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LotjaGi3g1v0150300.1
n.a. ABC transporter ATP-binding protein; TAIR: AT3G28345.1 ABC transporter family protein; Swiss-Prot: sp|Q6YUU5|MDR_ORYSJ Putative multidrug resistance protein; TrEMBL-Plants: tr|K7LUK7|K7LUK7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0150300 LjG1.1_chr3 20205779 20219792 +
2 domain predictions
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LotjaGi3g1v0150300.2
n.a. ATP-binding cassette transporter; TAIR: AT3G28415.1 ABC transporter family protein; Swiss-Prot: sp|Q9LSJ2|AB22B_ARATH ABC transporter B family member 22; TrEMBL-Plants: tr|G7JF16|G7JF16_MEDTR ABC transporter B family protein; Found in the gene: LotjaGi3g1v0150300 LjG1.1_chr3 20209631 20210687 +
2 domain predictions
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LotjaGi3g1v0150300.3
n.a. ATP-binding cassette transporter; TAIR: AT3G28345.1 ABC transporter family protein; Swiss-Prot: sp|Q9LHD1|AB15B_ARATH ABC transporter B family member 15; TrEMBL-Plants: tr|G7JF16|G7JF16_MEDTR ABC transporter B family protein; Found in the gene: LotjaGi3g1v0150300 LjG1.1_chr3 20210127 20210687 +
2 domain predictions
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LotjaGi3g1v0398300.1
n.a. ABC transporter B family protein; TAIR: AT1G02520.1 P-glycoprotein 11; Swiss-Prot: sp|Q9FWX7|AB11B_ARATH ABC transporter B family member 11; TrEMBL-Plants: tr|I7GUC2|I7GUC2_LOTJA ATP-binding cassette protein; Found in the gene: LotjaGi3g1v0398300 LjG1.1_chr3 80011067 80018397 +
2 domain predictions
 –
LotjaGi3g1v0411100.1
n.a. ABC transporter ATP-binding protein; TAIR: AT3G28860.1 ATP binding cassette subfamily B19; Swiss-Prot: sp|Q9LJX0|AB19B_ARATH ABC transporter B family member 19; TrEMBL-Plants: tr|G7L8C5|G7L8C5_MEDTR ABC transporter B family-like protein; Found in the gene: LotjaGi3g1v0411100 LjG1.1_chr3 81479079 81487409 +
2 domain predictions
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LotjaGi3g1v0411100.2
n.a. ABC transporter ATP-binding protein; TAIR: AT3G28860.1 ATP binding cassette subfamily B19; Swiss-Prot: sp|Q9LJX0|AB19B_ARATH ABC transporter B family member 19; TrEMBL-Plants: tr|G7L8C5|G7L8C5_MEDTR ABC transporter B family-like protein; Found in the gene: LotjaGi3g1v0411100 LjG1.1_chr3 81482046 81487409 +
2 domain predictions
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LotjaGi4g1v0256000.1
n.a. ABC transporter B family protein; TAIR: AT5G39040.1 transporter associated with antigen processing protein 2; Swiss-Prot: sp|Q9FNU2|AB25B_ORYSJ ABC transporter B family member 25; TrEMBL-Plants: tr|I3SLG6|I3SLG6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0256000 LjG1.1_chr4 60993561 60999760 -
2 domain predictions
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LotjaGi4g1v0256000.2
n.a. ABC transporter B family protein; TAIR: AT5G39040.1 transporter associated with antigen processing protein 2; Swiss-Prot: sp|Q9FNU2|AB25B_ORYSJ ABC transporter B family member 25; TrEMBL-Plants: tr|I3SLG6|I3SLG6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0256000 LjG1.1_chr4 60993625 60999713 -
2 domain predictions
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LotjaGi4g1v0256000.3
n.a. ABC transporter B family protein; TAIR: AT5G39040.1 transporter associated with antigen processing protein 2; Swiss-Prot: sp|Q9FNU2|AB25B_ORYSJ ABC transporter B family member 25; TrEMBL-Plants: tr|I3SLG6|I3SLG6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0256000 LjG1.1_chr4 60994163 60998963 -
2 domain predictions
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LotjaGi4g1v0314400.1
n.a. ABC transporter B family protein; TAIR: AT1G02520.1 P-glycoprotein 11; Swiss-Prot: sp|Q9FWX7|AB11B_ARATH ABC transporter B family member 11; TrEMBL-Plants: tr|I1LYF5|I1LYF5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0314400 LjG1.1_chr4 69105517 69112013 +
2 domain predictions
 –