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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR043504
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 15 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.343s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0359700_LC.1
n.a. Protease Do-like protein; TAIR: AT4G18370.1 DEGP protease 5; Swiss-Prot: sp|Q9SEL7|DEGP5_ARATH Protease Do-like 5, chloroplastic; TrEMBL-Plants: tr|I3SH86|I3SH86_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0359700_LC LjG1.1_chr1 83434778 83437331 +
2 domain predictions
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LotjaGi2g1v0236200.1
n.a. Serine protease; TAIR: AT5G36950.1 DegP protease 10; Swiss-Prot: sp|Q9FIV6|DGP10_ARATH Protease Do-like 10, mitochondrial; TrEMBL-Plants: tr|I1KZS0|I1KZS0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0236200 LjG1.1_chr2 69683282 69688655 +
2 domain predictions
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LotjaGi2g1v0246100.1
n.a. Serine protease; TAIR: AT3G27925.1 DegP protease 1; Swiss-Prot: sp|O22609|DEGP1_ARATH Protease Do-like 1, chloroplastic; TrEMBL-Plants: tr|I3S8D7|I3S8D7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0246100 LjG1.1_chr2 71150421 71157784 -
2 domain predictions
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LotjaGi2g1v0246100.2
n.a. Serine protease; TAIR: AT3G27925.1 DegP protease 1; Swiss-Prot: sp|O22609|DEGP1_ARATH Protease Do-like 1, chloroplastic; TrEMBL-Plants: tr|I3S8D7|I3S8D7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0246100 LjG1.1_chr2 71150764 71155263 -
2 domain predictions
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LotjaGi2g1v0259100.1
n.a. Serine protease; TAIR: AT5G39830.1 Trypsin family protein with PDZ domain-containing protein; Swiss-Prot: sp|Q9LU10|DEGP8_ARATH Protease Do-like 8, chloroplastic; TrEMBL-Plants: tr|I3S3D5|I3S3D5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0259100 LjG1.1_chr2 72661064 72665809 +
2 domain predictions
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LotjaGi2g1v0259100.2
n.a. Serine protease; TAIR: AT5G39830.1 Trypsin family protein with PDZ domain-containing protein; Swiss-Prot: sp|Q9LU10|DEGP8_ARATH Protease Do-like 8, chloroplastic; TrEMBL-Plants: tr|I3S3D5|I3S3D5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0259100 LjG1.1_chr2 72661424 72665629 +
2 domain predictions
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LotjaGi6g1v0060100.1
n.a. DegP protease-like protein; TAIR: AT3G03380.1 DegP protease 7; Swiss-Prot: sp|Q8RY22|DEGP7_ARATH Protease Do-like 7; TrEMBL-Plants: tr|I1LME4|I1LME4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0060100 LjG1.1_chr6 10953369 10980005 +
2 domain predictions
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LotjaGi6g1v0060100.2
n.a. DegP protease-like protein; TAIR: AT3G03380.1 DegP protease 7; Swiss-Prot: sp|Q8RY22|DEGP7_ARATH Protease Do-like 7; TrEMBL-Plants: tr|I1LME4|I1LME4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0060100 LjG1.1_chr6 10953662 10974112 +
2 domain predictions
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LotjaGi6g1v0272800_LC.1
n.a. Protease Do-like protein; TAIR: AT4G18370.1 DEGP protease 5; Swiss-Prot: sp|Q9SEL7|DEGP5_ARATH Protease Do-like 5, chloroplastic; TrEMBL-Plants: tr|I3SH86|I3SH86_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0272800_LC LjG1.1_chr6 58868806 58871496 +
2 domain predictions
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LotjaGi6g1v0272800_LC.2
n.a. Protease Do-like protein; TAIR: AT4G18370.1 DEGP protease 5; Swiss-Prot: sp|Q9SEL7|DEGP5_ARATH Protease Do-like 5, chloroplastic; TrEMBL-Plants: tr|I3SH86|I3SH86_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0272800_LC LjG1.1_chr6 58868847 58871495 +
2 domain predictions
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LotjaGi6g1v0272800_LC.3
n.a. Protease Do-like protein; TAIR: AT4G18370.1 DEGP protease 5; Swiss-Prot: sp|Q9SEL7|DEGP5_ARATH Protease Do-like 5, chloroplastic; TrEMBL-Plants: tr|I3SH86|I3SH86_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0272800_LC LjG1.1_chr6 58868865 58871480 +
2 domain predictions
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LotjaGi6g1v0272800_LC.4
n.a. Protease do-like chloroplastic-like; TAIR: AT4G18370.1 DEGP protease 5; Swiss-Prot: sp|Q9SEL7|DEGP5_ARATH Protease Do-like 5, chloroplastic; TrEMBL-Plants: tr|I3SH86|I3SH86_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0272800_LC LjG1.1_chr6 58868865 58871480 +
2 domain predictions
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LotjaGi6g1v0311000.1
n.a. Serine protease; TAIR: AT4G18370.1 DEGP protease 5; Swiss-Prot: sp|Q9SEL7|DEGP5_ARATH Protease Do-like 5, chloroplastic; TrEMBL-Plants: tr|I3SH86|I3SH86_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0311000 LjG1.1_chr6 62958675 62962683 +
2 domain predictions
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LotjaGi6g1v0329800.2
n.a. Glyoxysomal processing protease, glyoxysomal-like protein; TAIR: AT1G28320.1 protease-like protein; Swiss-Prot: sp|Q8VZD4|DEG15_ARATH Glyoxysomal processing protease, glyoxysomal; TrEMBL-Plants: tr|G7ISD6|G7ISD6_MEDTR Glyoxysomal processing protease, glyoxysomal-like protein; Found in the gene: LotjaGi6g1v0329800 LjG1.1_chr6 64498022 64503873 +
2 domain predictions
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LotjaGi6g1v0340800_LC.1
n.a. Protease Do-like protein; TAIR: AT4G18370.1 DEGP protease 5; Swiss-Prot: sp|Q9SEL7|DEGP5_ARATH Protease Do-like 5, chloroplastic; TrEMBL-Plants: tr|I3SH86|I3SH86_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0340800_LC LjG1.1_chr6 65472341 65474871 -
2 domain predictions
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