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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0236200 |
| Transcript ID | LotjaGi2g1v0236200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine protease; TAIR: AT5G36950.1 DegP protease 10; Swiss-Prot: sp|Q9FIV6|DGP10_ARATH Protease Do-like 10, mitochondrial; TrEMBL-Plants: tr|I1KZS0|I1KZS0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0236200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:69683282..69688655) extracted from Lotus japonicus Gifu genome v1.2.
CTAACCCATAAAAATTTGTTTAATCACGTGAAAAACAATATTATATGGCTTAGTTGTGAAGAAAATGTTTAACCTAAGTA TCAACAAAAATAGTCCATGCCGCCTCACTAGCTTGAACTTCAATAGCTAAACCCCCTGAACTGCACCATTGAGGTTTAGG GGTTTACAAATGGCTTCAATTCTTCGTGCAGTTCGTAACCTCTCCCGTTTCACTTCATCAACCACCAGAACCACACAGAA GAACACTCATTCACACTCTCTATCCAGTTCCAAGAACTGCAATCTCATCAAAAAAACTGACAACCAAATCCGACGGTTGC CTCTGCCGGCATTGACGTCTTACAAGTTCCGGCACGGCGGTGGAAGAACGCCGCCGGTAAGGAAGGCTCACTCTCCTATC CGTTATCGCGGCGCGGGCTCGGACGTGTCGCATAACACGGCGGTGGAGCTTGCATTGAATTCAGTAGTCAAGGTTTTCAC TGTTTCGTGTAGTCCTAACTACTTGCTTCCTTGGCAGAACAAGGCACAGAGAGAAACAATGGGTTCTGGTTAGTTCAATT TATTATTTTACTTACAATTTTTCAGTATTTAGCTAGCTTATTATGGTGCTCCTTTGTAAGTTTTAGAGTGTAAATCAGAA TCAAAATAGATATGACAGGCATTTCAGATTTTATCTATCAAACATTAACACCTTTGAGGGTTGAGGCTTATGTTTTAATG GAAGAGATTGGAAGGAAGTGAGGGGAAACTAGAGGAGCTATAGAATGTTTATCTTAATGAATGTAGGGTGGTTAAGCGCT TTGAAACAACCTAATAGCTGCTTATTCTACTCCGAGGTGGATGATTTCAGTGGATGCAATCTGAAGCTTTAATCAAGATG GTCTGGTAGTTATATCTGCAGTGTTGTTAATTGTGGATGGTGAAATCCCACCATACACGACAAGTAGTGTTGGAATTGGC GGCCATATGGTAGGATATTTGCCATGGAGGAAAGCCAAAAAACTGACATGGCGGATATTTGATAACACTGTAATACTGTA TATCTGAAGCATATATGTTTGAGATATCGCATGTTACTAACTTTGGATGCTTGCATTTTCTCCTGGGAAGTGGAAACAGA TTACTTGGAGTTTGACTCATTCTTAGTGATTGTAAGCAACTTAGTTCCAAACTTCCAATTTGAAACAAGCTGAAAATAAG TTATAGGTAAGCATACACACTTATTCATAAGCTAATCTGAAAAGCTTATGAAAATAAATTCAAAACAACTTATAGGTAGG TCATAAGCTATTTAAATATGCTCTCCTGAACACTTGCGTAAGCGCTTATGCTATAAGATAAACTCAAACTGCTACGTCTA TGTGAATATGAAATTGCATAATTTATTTGCAGGTCTGCAAATAAATTAGCACCTTCATTTGAAAGGAAGGACCTCTCTTT GTCTGTTGATTGAAATTAAGCCTTGCTGCTTTACATGTTTCCAAGATGTAATTCATATATTATTATTCCCTGATGTTTAT TTTTAACAGTTGTGTGCTTTCATGTTTTTTATTATTTCAGTTTTGTTCTATGCAGCTTTTTTTTTGTGTATGGCTGGACT ACACTCAGATGAATTAAAAATTTAAGAAATCTATTTATAAAATTAGACCAAATGGCTCAATTGAAAAAATGCATATATGT TGAGGGTGGAAATAGTAATTTTCTGTAAATTTATTGAAGCATTTTTGCTCTTGGCCCTGTTGTCCATTCATGACTGTTTA CTCTGATACTTTTTACTTTCTCTAAAAAGCTTTTACGATGGTGATGCAGGGTTTGTAATTCTAGGCAGAAAGATTCTCAC GAATGCTCACGTGGTAGCTGATCATTCATTTGTACTTGTAAGGAAACATGGTTCTCCAACCAAGTATAAAGCAGAAGTTA AAGCTGTTGGTCATGAATGTGACTTAGCTATATTGGTTGTTGAGAATGATGAATTTTGGGATGGTATGAATCCCTTGGAG TTTGGAGACATTCCGTTTCTACAAGAAGCTGTTGCTGTTGTGGGATATCCTCAAGGTGGTGACACCATTTCTGTTACTAA AGGGGTCGTTTCCAGGGTTGAACCTACACAATATGTACATGGTGCAGCCCAGCTGATGGCAATACAAATAGATGCAGCCA TAAATCCAGGGAATAGTGGTGGCCCAGCAATTATGGGCAAGAAGGTTGCTGGAGTAGCATTCCAAAATCTTTCAGGTGCT GAGAATATAGGGTAAGTCTTTTGATTTTCTTTGCCTTTATAATTCTTGAGTTTAAACTTAAGGTTTATGAATTCTCAATC ATGCCAGTAATTTTCATATATTTTAGTTCACAGTTAGGTTACACAGAGAACAAATTTTGCATACTAGATTACTTCCTTTC ATATTGGATATTGCAGTTACCTTATACCTGTACCTGTAATAAAGCATTTTATATCTGGTGTAGAAGAAAAAGGGAAGTAT ATTGGATTTTGCTCTCTGGGTTTGTCATGCCAGACTACTGAAAATGTACACCTCAGAAACCATTTTGGCATGCAACCTAA CATGACTGGGGTGCTTGTAAGCAAAATAAATCCACTTTCAGATGCATACAAAGTTTTGAGGAAAGATGATATTATACTTT CATTTGATGGTGTGCCTATAGCGAATGATGGTACAGGTGTGTTCTTTCTTTACTTTTTCCTGGATTTTCTTATTTACTCT ATATATAATTAACCTTTGAGAAACAGAGAATTGATAACATTTGATATGATGATTGCATTGCAGTTTCTTTCCGAAACAGA GAACGGATAACATTTGATCACTTGGTGTCTATGAAAAAGCCTAATGAAAATGCAATTGTTAGAGTTCTGCGGGATGGCCT AGAGCATGAACTTAGTATCACTCTCCAACCTGTAAGTTATATATGTTTTATGTGTAATAAGTTAATGATTATCCATACTT GATTTAAATATAGTTCGGGAAAGTTAGATACGTTTAGTACCATTGTGGAAAGGGCAGCAACCATCAGAATGATATTGGGT TGATAATTCAGTGGTTTGGAAGATTCGATCAGTTGTGAAATGATTCGTTAAAGACTTTCTTTCAATTTACATCAAGTTGG TTACTAATGGGGTGAGTTTCTGTTTGGATCTTACACGTGAATGGAGCTGTAGATAGTTTATACTGTAGTTATCAATCTTG GATAGTGGCGCAAAGCGACCAACCCCAGAAAAGGTTAGCATAACAGCAAATACTGGAATGACCAATATACCAAATATTAT AGATACAAGATAAAAAATATACACATCTAAATGCTAAAAAAATTAACAATTACCCAAAATTGAAGACATTCATGTTCTCA AGTTATAGTGTAATCACACATTCACCATCAATTTAAGTCATGTTAAAAAAATGAGAATATAGAAATGGAACCAACAAAAA AAAAGATTATGGAAAAACCAATGTATTAGATCAAAATTTGAGGAATGTGAACTGTGAAGCATGAAGGAAGAGCAAAATAC AAAAGAAAAAAGTAACTGTACCCTGCAAGCTGTGATGTGTGAACAGACAGATCTTGATGTCTGAGAGCAGTGGCTCTGTG GGAAAATCCTGGGATTGGCCAGTAATCACTAATGACACACCAATGAGCATTGGGACTGTGGCCAGAAACTAAAGGGATTT CAACCCTTGATTTTGTTTTAATATTTGATAATTTTAATGTATGGAGGAGAAAATAGATTTGTTTGAATGGTGACATCACT AACTGTACACCCTGCAGTTTTTCCATTTCCTACTTGTTACAAATTGGTTTTGGGCAACAGTTTTTTTTTTTTTTAATATT GCTTTCAATATTTCAGATCCAGCCCTTAGTTCCAGTTCATCAGTTTGATAGACTTCCAAGTTATTACATTTTTGCTGGTT TGGTATTTGCTCCTCTCACCCAGCCATACCTTCATGAGTACGGGGAAGACTGGTATAATACATCACCTCGTCGTTTGTGT GAACGGGCATTGAGAGAATTACCCAAGAAAGCAAATCAGCAACTTGTTATCTTGTCTCAGGTTAGCATCATTTTAACTTA AGTGCAGTTACTGCCGAGGCCTTTTTTGTTTCTTGATTCCTTTGAAGAGGATTATCATATCCTGTGCCTCACTCCTTTGC TTTTTCAATAACATCTCTTTTAAGATTAAACATATGGTCCACCATTGTAAAACTCATTGCCATGATAATCCCACATTAGT TTGTGACATTGTGAATGATATATATGTTAGACAAAGGAGTGAAGACAAAAGTGCACACAATAATTTCCCTACGTTTTGGG GAGAACCTAAATTGAACTTTTTCATATAAGAGAAATGATAAGTAGAGTATATTTATGAGTTGATTTCAGCAAATGAATGC ATGTATTTGGTTCAGGTATTGCTTCTATTAATAATATCTTATTTGTTTTAGGTCCTGATGGATGATATCAATGCTGGATA TGAGCGTCTTGCAGAGTTACAGGTGCCAACTTGTATATGCTTTAGCTATTTATTCAATGAGTAAATCTGGTAATGATGAA TATCTTAGATTTCATTCATTAGTATAGATGCAAATTCAATGGGCCAATGACCAAGATTGCTTTAGAAATAATATTATCAA TTTTTTACTCTATGCACATTTAGATCTGTTGTTAATATTGTTCACTTAAAAGGGGTGTTCTTTTAGTGCTTATTTGATGT GTTGATTCTGATACCCAGGTTTTGAAGGTTAATGGAACAGAACTAGACAATCTAGAACATTTACGCCAACTTGTTGAAAA CTGTAGCACAGACTGCTTGCGGTTCGATTTGGAAGATGATAGGGTCATTGTCTTGAACTATGAAACGGCAAAAATTGCCA CTTCTAGAATTTTGAAGCGTCACAGAATACCTTCATCAATGTCTGTTGATCTTATTGATGCACAGAATAATTTACAAACT GGGCCGACTTTTTCACATTGAGATTGCAGTTACTCATTCGTCAATAAGAGAGCATATTGGTATGTTAGTTTTGAACAATC ATTCTGATTTTCTCTTAAATTTATGTAAACTTTGACAATGGATTTTCCATATGATTATTGTTATTGATTTTTTACCTTAT TACTGGACTAACCATGTAACAACTCTTGAAACTATAATAGGCCTCACAATGTAACTTGAAAAATAGATAGTATATTGTGT ATGTGTGCAGGCTACAGTTGTTTTATTATTGTTGTTTTAGTCATAGCAAATTGCTTGGATCGTTTAATACAACATTTCAT ACAACCAACTAATTTTATTAACTTTTGATTTATTGTCTTTTAATCCTCCCTCCTAACTCTTTGCTTCTTTCGTTTTAATT TTATTGCTTAAAAG
CDS sequence (LotjaGi2g1v0236200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCAATTCTTCGTGCAGTTCGTAACCTCTCCCGTTTCACTTCATCAACCACCAGAACCACACAGAAGAACACTCA TTCACACTCTCTATCCAGTTCCAAGAACTGCAATCTCATCAAAAAAACTGACAACCAAATCCGACGGTTGCCTCTGCCGG CATTGACGTCTTACAAGTTCCGGCACGGCGGTGGAAGAACGCCGCCGGTAAGGAAGGCTCACTCTCCTATCCGTTATCGC GGCGCGGGCTCGGACGTGTCGCATAACACGGCGGTGGAGCTTGCATTGAATTCAGTAGTCAAGGTTTTCACTGTTTCGTG TAGTCCTAACTACTTGCTTCCTTGGCAGAACAAGGCACAGAGAGAAACAATGGGTTCTGGGTTTGTAATTCTAGGCAGAA AGATTCTCACGAATGCTCACGTGGTAGCTGATCATTCATTTGTACTTGTAAGGAAACATGGTTCTCCAACCAAGTATAAA GCAGAAGTTAAAGCTGTTGGTCATGAATGTGACTTAGCTATATTGGTTGTTGAGAATGATGAATTTTGGGATGGTATGAA TCCCTTGGAGTTTGGAGACATTCCGTTTCTACAAGAAGCTGTTGCTGTTGTGGGATATCCTCAAGGTGGTGACACCATTT CTGTTACTAAAGGGGTCGTTTCCAGGGTTGAACCTACACAATATGTACATGGTGCAGCCCAGCTGATGGCAATACAAATA GATGCAGCCATAAATCCAGGGAATAGTGGTGGCCCAGCAATTATGGGCAAGAAGGTTGCTGGAGTAGCATTCCAAAATCT TTCAGGTGCTGAGAATATAGGTTACCTTATACCTGTACCTGTAATAAAGCATTTTATATCTGGTGTAGAAGAAAAAGGGA AGTATATTGGATTTTGCTCTCTGGGTTTGTCATGCCAGACTACTGAAAATGTACACCTCAGAAACCATTTTGGCATGCAA CCTAACATGACTGGGGTGCTTGTAAGCAAAATAAATCCACTTTCAGATGCATACAAAGTTTTGAGGAAAGATGATATTAT ACTTTCATTTGATGGTGTGCCTATAGCGAATGATGGTACAGTTTCTTTCCGAAACAGAGAACGGATAACATTTGATCACT TGGTGTCTATGAAAAAGCCTAATGAAAATGCAATTGTTAGAGTTCTGCGGGATGGCCTAGAGCATGAACTTAGTATCACT CTCCAACCTATCCAGCCCTTAGTTCCAGTTCATCAGTTTGATAGACTTCCAAGTTATTACATTTTTGCTGGTTTGGTATT TGCTCCTCTCACCCAGCCATACCTTCATGAGTACGGGGAAGACTGGTATAATACATCACCTCGTCGTTTGTGTGAACGGG CATTGAGAGAATTACCCAAGAAAGCAAATCAGCAACTTGTTATCTTGTCTCAGGTCCTGATGGATGATATCAATGCTGGA TATGAGCGTCTTGCAGAGTTACAGGTTTTGAAGGTTAATGGAACAGAACTAGACAATCTAGAACATTTACGCCAACTTGT TGAAAACTGTAGCACAGACTGCTTGCGGTTCGATTTGGAAGATGATAGGGTCATTGTCTTGAACTATGAAACGGCAAAAA TTGCCACTTCTAGAATTTTGAAGCGTCACAGAATACCTTCATCAATGTCTGTTGATCTTATTGATGCACAGAATAATTTA CAAACTGGGCCGACTTTTTCACATTGA
Protein sequence (LotjaGi2g1v0236200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASILRAVRNLSRFTSSTTRTTQKNTHSHSLSSSKNCNLIKKTDNQIRRLPLPALTSYKFRHGGGRTPPVRKAHSPIRYR GAGSDVSHNTAVELALNSVVKVFTVSCSPNYLLPWQNKAQRETMGSGFVILGRKILTNAHVVADHSFVLVRKHGSPTKYK AEVKAVGHECDLAILVVENDEFWDGMNPLEFGDIPFLQEAVAVVGYPQGGDTISVTKGVVSRVEPTQYVHGAAQLMAIQI DAAINPGNSGGPAIMGKKVAGVAFQNLSGAENIGYLIPVPVIKHFISGVEEKGKYIGFCSLGLSCQTTENVHLRNHFGMQ PNMTGVLVSKINPLSDAYKVLRKDDIILSFDGVPIANDGTVSFRNRERITFDHLVSMKKPNENAIVRVLRDGLEHELSIT LQPIQPLVPVHQFDRLPSYYIFAGLVFAPLTQPYLHEYGEDWYNTSPRRLCERALRELPKKANQQLVILSQVLMDDINAG YERLAELQVLKVNGTELDNLEHLRQLVENCSTDCLRFDLEDDRVIVLNYETAKIATSRILKRHRIPSSMSVDLIDAQNNL QTGPTFSH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 561 | 556 | 1.7E-289 | – | |
| PANTHER | 6 | 561 | 556 | 1.7E-289 | – | |
| Gene3D | 83 | 182 | 100 | 4.3E-16 | ||
| SUPERFAMILY | 89 | 294 | 206 | 3.26E-39 | ||
| Pfam | 125 | 254 | 130 | 5.3E-20 | – | |
| PRINTS | 133 | 145 | 13 | 3.2E-11 | ||
| PRINTS | 155 | 175 | 21 | 3.2E-11 | ||
| Gene3D | 196 | 296 | 101 | 1.2E-18 | ||
| PRINTS | 234 | 251 | 18 | 3.2E-11 | ||
| Gene3D | 299 | 405 | 107 | 3.4E-14 | ||
| CDD | 301 | 399 | 99 | 9.47823E-11 | – | |
| Pfam | 321 | 401 | 81 | 1.2E-6 | ||
| SUPERFAMILY | 324 | 429 | 106 | 5.32E-10 | ||
| PRINTS | 340 | 352 | 13 | 3.2E-11 | ||
| Gene3D | 406 | 559 | 154 | 1.8E-56 | – | |
| Pfam | 408 | 552 | 145 | 2.8E-53 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of LotjaGi2g1v0236200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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