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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0259100 |
| Transcript ID | LotjaGi2g1v0259100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine protease; TAIR: AT5G39830.1 Trypsin family protein with PDZ domain-containing protein; Swiss-Prot: sp|Q9LU10|DEGP8_ARATH Protease Do-like 8, chloroplastic; TrEMBL-Plants: tr|I3S3D5|I3S3D5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0259100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:72661424..72665629) extracted from Lotus japonicus Gifu genome v1.2.
CACTCCCAACACTTCCCAAACGACACCGTTTCCTCCCAACCCATCTCCATTTCAAGGTTCCCCACCATCACATTATGTAG CTCCATTGTTTTGCTGTAATGGGTGTCTGTGTTTTGCTGCAACAATAGCCAAAGTTTGAATCCTTGTGCATGTTATATAG TTCATAAAACTGCATTTTTATAGTTTTTTTTTTTTGGTGGGTTGTAACTTTTCTTGATGTAGGCTTATTTGATTATACGT GTAGGCCAGTTCAAGATGAATCACAGGATTTTGAAGCAATGCTGAGTAAAGAAATTATGTCCCCGACACGACGTGTGTTA ATTGCGAGCTTGACTATGTTTTCCTGTTTCCAATCTTCAAGGTACTTGTCAGGTCCGCACTATTCAGCTTCCATGTTCAA TTTGTTTGATTGTATATATAAGTAGTATATTGCAAAGTTCATAAATTGTTAACTGGAATTTGAATGGTCATTGTCATCCA CTTCACATTTATACATTGCTTAAAGCTTATAATTTTCATCTTGTCAATGCTGATGAGGTGGAATTAATGGAGTAAGGTGA TAGAATTCTAGTTGTTTTGTTGTAATTTTCTATCTCTTTCATGATAGATATACTGTACTATTCTCTCATAGAAGCCTCTA TTTGTATTTACTATTTACTTCCAAAGTCTCTCATCTTGCAATAATTTGTAAATGCACAGCCTTAGCATTGGGAGATCCAT CAGTGACACTTGAACAAGTGACTCCTCCTGTGTTTCCTTCTGGGCCACTCTTTCCTGCAGAGGTTAGCTTTCAGCTATGG CACCTCTTTTTATGACACTTTTTATTCTAACCTCTCAACAGCAATATTCCCGGCAGCTTATTCCAATGCATTGTGATTGG CAGGATCGAGTTGTTCAACTATTTGAAAGGAACACGTACTCTGTTGTTAACATCTTCGATGTCACATTGCGTCCTCAACT TAATGTGACAGGTGTGGTTGAGGTAACCTAGTACTTAAATGCTGCTATCTGATGTTAAGTCAGTTGAAGGATATATTAGG ACTATCTAATTTATTAATCGTTATAGCATCTCTAGCTTATAAGCATCATAAGATTTTTGTTGCCAAACCTATGTGCTGGA ATCAAACAAAATAGTTACTGTTTGCATCAATACTGGCAGATTCCTGAAGGAAATGGTTCTGGAGTAGTCTGGGATGACGA GGGCCACATTGTGACAAATTATCATGGTGAGAATCAGTGGTGGATATACAGTTTTATGTTAAGTCTAAATTCACTATCTT GTATCTCCAAAACAGTATATGTATACTTTTACATTGGGTCTATTTACTCCGATTTGAGTGTGTGGATCTGGATCGGGCCT TTCCACTGTATTTATGTCATTTAACTTGACTTCTAGACTTGGATGAATTCTCAATGCAATACTGAGAATTTGTTGAAAAT GTTCCGATCCTAATAAATATCTTTTGATCTTTCTCCCCTTTCCCCAAGCCTTTGGAATTTTTAGACCCAGTGTTTGCCAA GCCTACTGGCTGGACTCTATTGGAGGGGTTTTCATTATTCATGCACACACACACACACACCAATCTTAGTTTATCCACTA GGCTTTTACAGATTAGGTGAAGTTATCTGATTGTTACATTCTTATATTACTCAGTAATTGGCAATGCCCTTTCAAGAAAC CCAAGCTCTGGTCAGGTTGTTGCACGAGTTAATATTCTAGCATCAGATGGGTGAGGCTCATGGAGACTTTCTTTGCATAT AATGCTTTTGCAAAAAATAATCAATATATGTATTTCTGACACTTTCTATTATAAAGGGTACAAAAGAATTTTGAGGCTAC AGTCGTTGGAGCTGACCGTTTAAAAGATCTTGCTGTCTTGAAGGTATCCCACTCTATTCATTTCAAATAAATTTCGGTTG CTATCAAAATTACAGTCCTATGGATGTTAGGCCTCATGACTAAAACAATCTTTTGAACTTTTTTTCCCCTGCAAATCACT TGTCAATTATTCATATCTTTTCCAAGTTCGATATTGTTTTTGCTGCTGTTATGCATCGTAGTGGCAAATCAGGTCTTGTA TTTGCTTGTTTCAGCTTTACCTCTACAATCTACTCCATTTAATGACTAATTCATAATTCAACTTTAAAATGTTGTGTTAA TTAAAGTAGTACTAATAATACCACCAAGCGTGTTGATTAACTGACATGGAGTTGTTCTAGATTAAGCAGAGGTCTCCGGC TCGAGTCCCTGTGAATTCAACCGCGTTTAAATACTTAGTAGAAAGAGCTTTATCACCCACAGTGGTCATACTTGGCTCAA ATAGGATTGCCTCAGTGGAGGGTACCTGTGGTTTAAACTAAAAAAAGTAGCACTAATGATGAGTTTGTCTGTATACATCC CTTTAACATCGTTGGTGAAGTGGAGGATTAAATATTAGACTGAATTATGAAGACCACCCTCAACTCAGGGTCATGTGCAA TTTTCCCCCGAGTGTTCCCAGAACAATGAAGCCCCTAAATCAATGACTGTGTGAACCATGCCTGTGTCTATCTCATTTGA ATAGTTAAAAAATTGTGCATGTATCATACAATACTAGATATTAAAAACTTCAGAAATACAGGTAGAAGCCCCTGAAGATA TTTTAAGGCCTATCAAGGTGGGGCAGTCATCGTCTCTAAAAGTTGGGCAGCAGTGTTTGGCAATTGGAAATCCGTTTGGC TTTGATCACACCCTCACAGTTGGGGTTATCAGTGGACTTAACCGAGACATCTTTAGTCAAACCGGTGTCACAATTGGTGG CGGTATTCAAACTGATGCAGCAATAAATCCCGGGAACAGGTTAAAGAGGCTCCCTTTCATATCTGAACTAGGAATGGTTC CCTTTCCGTTGTTGCAATTCACTTTGTCAAGAAGTTGTTCTCTTCATTTTGGTGTTAACTAGTGCTGTTTCTTACTTTTC CTGTGACTCTAATAGTGGAGGTCCTCTCCTGAATTCGAAAGGAAGCTTAATTGGGATTAATACTGCAATATTTACTCAGA CAGGCAAGTTTCTTTATCTTTGTTGCCACCACAATCAGAAGGCGTTGGACTACATTACAAAATATTGATGTATGTTTCAT ATGATAGCAGAGGAAATCATTTCAAAATTTAGAATATTGAATGTTACATTGTTGGTCTATGAGCCCGTTTAAGGATGCGG ACTAAAGAACACTTATTGGAGTTTACCTATTAGAAAAAGCACTAGATAATCTCCAATAAGTGCTCTCTCGTCTGCATCCA AACAGACTTTATAAGCCACAAGTTCTGGTTACCCTAATATAGCTTTGCACGCTTCACTTTTATTGCAGGAACATCAGCTG GTGTTGGATTTGCCATCCCATCTTCGACTGTACTTCGAATTGTTCCTCAATTGATTCAATATGGAAAAGTAAGTGGAACA TCACACCACACACAGGAAAAACAGTACCTTTTATCTATTCTATATATTGGCGTGCATGTTTTTTAGCTCTATATTTTTGT AAGATCTATAGTATATACCCATATCTGAGTCCATGGTTCATCAATTTAAGGTTGTTAGAGGTGGTTTGAATGTGGATATT GCTCCTGACTTAGTTGCCAATCAACTTAATGTTCGAAATGGGGCTCTTATTCTTCAGGTAAGTCCATCAGATTTTTTTTT TGCTTTACTGCAATTGAACTTTGTATTTATAGTTTCTTCGAAATCGTTCTTTAACTCCCAAGTACTTGTGTTCTTTAGGT TCCTGCAAATAGTCCTGCTGCCAAAGCTGGGCTAATTCCCACGACAAGGGGCTTTGCCGGTAATATAGTCCTTGGAGATA TCATTGTTGCAGTTGACAATAAACCTGTGAGCCTTCTTTTGCAGAAACTGTTTATTAATTGTTTAAACCATTCTCTTTCA AAGGCCAAGATAATCATGTTATATGGTAAACCTTTATTTTATTGATCTATAAATAAAACACAAATATTGCTTTCATAATT CATACACATTACACAACATGTCTAAGTAGACAAGGTGATAATTCATGAATTTGATAATTTGGGTGCATCCTTTCCAGGTG AAGAGCAAAGCAGAATTGTTGAAAGCATTGGATGACTATAATGTAGGAGATAAAGTAATCTTGCTCATTCAGAGGGGTAG TGAAAAGTTGGAGGTGCCTATGCTACTTGAGGAACAAAAATCTTGA
CDS sequence (LotjaGi2g1v0259100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTGAGTAAAGAAATTATGTCCCCGACACGACGTGTGTTAATTGCGAGCTTGACTATGTTTTCCTGTTTCCAATCTTC AAGGTACTTGTCAGCCTTAGCATTGGGAGATCCATCAGTGACACTTGAACAAGTGACTCCTCCTGTGTTTCCTTCTGGGC CACTCTTTCCTGCAGAGGATCGAGTTGTTCAACTATTTGAAAGGAACACGTACTCTGTTGTTAACATCTTCGATGTCACA TTGCGTCCTCAACTTAATGTGACAGGTGTGGTTGAGATTCCTGAAGGAAATGGTTCTGGAGTAGTCTGGGATGACGAGGG CCACATTGTGACAAATTATCATGTAATTGGCAATGCCCTTTCAAGAAACCCAAGCTCTGGTCAGGTTGTTGCACGAGTTA ATATTCTAGCATCAGATGGGGTACAAAAGAATTTTGAGGCTACAGTCGTTGGAGCTGACCGTTTAAAAGATCTTGCTGTA GAAGCCCCTGAAGATATTTTAAGGCCTATCAAGGTGGGGCAGTCATCGTCTCTAAAAGTTGGGCAGCAGTGTTTGGCAAT TGGAAATCCGTTTGGCTTTGATCACACCCTCACAGTTGGGGTTATCAGTGGACTTAACCGAGACATCTTTAGTCAAACCG GTGTCACAATTGGTGGCGGAACATCAGCTGGTGTTGGATTTGCCATCCCATCTTCGACTGTACTTCGAATTGTTCCTCAA TTGATTCAATATGGAAAAGTTGTTAGAGGTGGTTTGAATGTGGATATTGCTCCTGACTTAGTTGCCAATCAACTTAATGT TCGAAATGGGGCTCTTATTCTTCAGGTTCCTGCAAATAGTCCTGCTGCCAAAGCTGGGCTAATTCCCACGACAAGGGGCT TTGCCGGTAATATAGTCCTTGGAGATATCATTGTTGCAGTTGACAATAAACCTGTGAAGAGCAAAGCAGAATTGTTGAAA GCATTGGATGACTATAATGTAGGAGATAAAGTAATCTTGCTCATTCAGAGGGGTAGTGAAAAGTTGGAGGTGCCTATGCT ACTTGAGGAACAAAAATCTTGA
Protein sequence (LotjaGi2g1v0259100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLSKEIMSPTRRVLIASLTMFSCFQSSRYLSALALGDPSVTLEQVTPPVFPSGPLFPAEDRVVQLFERNTYSVVNIFDVT LRPQLNVTGVVEIPEGNGSGVVWDDEGHIVTNYHVIGNALSRNPSSGQVVARVNILASDGVQKNFEATVVGADRLKDLAV EAPEDILRPIKVGQSSSLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSQTGVTIGGGTSAGVGFAIPSSTVLRIVPQ LIQYGKVVRGGLNVDIAPDLVANQLNVRNGALILQVPANSPAAKAGLIPTTRGFAGNIVLGDIIVAVDNKPVKSKAELLK ALDDYNVGDKVILLIQRGSEKLEVPMLLEEQKS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 36 | 36 | - | – | |
| Phobius | 1 | 12 | 12 | - | – | |
| ProSiteProfiles | 1 | 23 | 23 | 5.0 | – | |
| PANTHER | 2 | 220 | 219 | 3.2E-191 | – | |
| PANTHER | 2 | 220 | 219 | 3.2E-191 | – | |
| Phobius | 13 | 24 | 12 | - | – | |
| Phobius | 25 | 36 | 12 | - | – | |
| Phobius | 37 | 353 | 317 | - | – | |
| Gene3D | 54 | 170 | 117 | 3.4E-28 | ||
| SUPERFAMILY | 58 | 255 | 198 | 1.3E-31 | ||
| Pfam | 98 | 224 | 127 | 6.2E-16 | – | |
| PRINTS | 107 | 119 | 13 | 1.1E-13 | ||
| Gene3D | 171 | 220 | 50 | 6.5E-10 | ||
| PRINTS | 180 | 204 | 25 | 1.1E-13 | ||
| PANTHER | 220 | 352 | 133 | 3.2E-191 | – | |
| PANTHER | 220 | 352 | 133 | 3.2E-191 | – | |
| SUPERFAMILY | 221 | 349 | 129 | 3.15E-15 | ||
| ProSiteProfiles | 241 | 339 | 99 | 9.149 | ||
| SMART | 250 | 339 | 90 | 9.5E-5 | ||
| Gene3D | 250 | 353 | 104 | 1.5E-34 | ||
| CDD | 254 | 346 | 93 | 1.93483E-17 | – | |
| Pfam | 268 | 346 | 79 | 9.8E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of LotjaGi2g1v0259100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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