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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0259100 |
| Transcript ID | LotjaGi2g1v0259100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine protease; TAIR: AT5G39830.1 Trypsin family protein with PDZ domain-containing protein; Swiss-Prot: sp|Q9LU10|DEGP8_ARATH Protease Do-like 8, chloroplastic; TrEMBL-Plants: tr|I3S3D5|I3S3D5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0259100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:72661064..72665809) extracted from Lotus japonicus Gifu genome v1.2.
CTTACCTTGGACTATTTGCATTGGTGTATCAAAATATATGCACATGATTTCGGAACATTCGAGTGGAGAGCGTTCGGATA CAGAATCAACATTAATATCTCAGAAACATAGCAGAGCACCCTTATCTCCCTGCCCCTCTCTCTGTCTCTCCCTCCTCAAA TTCAACAACATTCAAGTCTGCAAATTTTCATTCTAGTTTGCAGATTCCAACCCACCCCAACATTCTTCTGTTGGGGGAAG AAAATGCAAGTGTCAGCATGCAATTTGTGGTCTCCGGGAGTGCCACCTCAGGCTCACAGAAGCACTGTTCTCAGCCGCCG GAAGATCTGCTTTGATGGCCTATCCTGTGTGTGCCGCTCTCACTCCCAACACTTCCCAAACGACACCGTTTCCTCCCAAC CCATCTCCATTTCAAGGTTCCCCACCATCACATTATGTAGCTCCATTGTTTTGCTGTAATGGGTGTCTGTGTTTTGCTGC AACAATAGCCAAAGTTTGAATCCTTGTGCATGTTATATAGTTCATAAAACTGCATTTTTATAGTTTTTTTTTTTTGGTGG GTTGTAACTTTTCTTGATGTAGGCTTATTTGATTATACGTGTAGGCCAGTTCAAGATGAATCACAGGATTTTGAAGCAAT GCTGAGTAAAGAAATTATGTCCCCGACACGACGTGTGTTAATTGCGAGCTTGACTATGTTTTCCTGTTTCCAATCTTCAA GGTACTTGTCAGGTCCGCACTATTCAGCTTCCATGTTCAATTTGTTTGATTGTATATATAAGTAGTATATTGCAAAGTTC ATAAATTGTTAACTGGAATTTGAATGGTCATTGTCATCCACTTCACATTTATACATTGCTTAAAGCTTATAATTTTCATC TTGTCAATGCTGATGAGGTGGAATTAATGGAGTAAGGTGATAGAATTCTAGTTGTTTTGTTGTAATTTTCTATCTCTTTC ATGATAGATATACTGTACTATTCTCTCATAGAAGCCTCTATTTGTATTTACTATTTACTTCCAAAGTCTCTCATCTTGCA ATAATTTGTAAATGCACAGCCTTAGCATTGGGAGATCCATCAGTGACACTTGAACAAGTGACTCCTCCTGTGTTTCCTTC TGGGCCACTCTTTCCTGCAGAGGTTAGCTTTCAGCTATGGCACCTCTTTTTATGACACTTTTTATTCTAACCTCTCAACA GCAATATTCCCGGCAGCTTATTCCAATGCATTGTGATTGGCAGGATCGAGTTGTTCAACTATTTGAAAGGAACACGTACT CTGTTGTTAACATCTTCGATGTCACATTGCGTCCTCAACTTAATGTGACAGGTGTGGTTGAGGTAACCTAGTACTTAAAT GCTGCTATCTGATGTTAAGTCAGTTGAAGGATATATTAGGACTATCTAATTTATTAATCGTTATAGCATCTCTAGCTTAT AAGCATCATAAGATTTTTGTTGCCAAACCTATGTGCTGGAATCAAACAAAATAGTTACTGTTTGCATCAATACTGGCAGA TTCCTGAAGGAAATGGTTCTGGAGTAGTCTGGGATGACGAGGGCCACATTGTGACAAATTATCATGGTGAGAATCAGTGG TGGATATACAGTTTTATGTTAAGTCTAAATTCACTATCTTGTATCTCCAAAACAGTATATGTATACTTTTACATTGGGTC TATTTACTCCGATTTGAGTGTGTGGATCTGGATCGGGCCTTTCCACTGTATTTATGTCATTTAACTTGACTTCTAGACTT GGATGAATTCTCAATGCAATACTGAGAATTTGTTGAAAATGTTCCGATCCTAATAAATATCTTTTGATCTTTCTCCCCTT TCCCCAAGCCTTTGGAATTTTTAGACCCAGTGTTTGCCAAGCCTACTGGCTGGACTCTATTGGAGGGGTTTTCATTATTC ATGCACACACACACACACACCAATCTTAGTTTATCCACTAGGCTTTTACAGATTAGGTGAAGTTATCTGATTGTTACATT CTTATATTACTCAGTAATTGGCAATGCCCTTTCAAGAAACCCAAGCTCTGGTCAGGTTGTTGCACGAGTTAATATTCTAG CATCAGATGGGTGAGGCTCATGGAGACTTTCTTTGCATATAATGCTTTTGCAAAAAATAATCAATATATGTATTTCTGAC ACTTTCTATTATAAAGGGTACAAAAGAATTTTGAGGCTACAGTCGTTGGAGCTGACCGTTTAAAAGATCTTGCTGTCTTG AAGGTATCCCACTCTATTCATTTCAAATAAATTTCGGTTGCTATCAAAATTACAGTCCTATGGATGTTAGGCCTCATGAC TAAAACAATCTTTTGAACTTTTTTTCCCCTGCAAATCACTTGTCAATTATTCATATCTTTTCCAAGTTCGATATTGTTTT TGCTGCTGTTATGCATCGTAGTGGCAAATCAGGTCTTGTATTTGCTTGTTTCAGCTTTACCTCTACAATCTACTCCATTT AATGACTAATTCATAATTCAACTTTAAAATGTTGTGTTAATTAAAGTAGTACTAATAATACCACCAAGCGTGTTGATTAA CTGACATGGAGTTGTTCTAGATTAAGCAGAGGTCTCCGGCTCGAGTCCCTGTGAATTCAACCGCGTTTAAATACTTAGTA GAAAGAGCTTTATCACCCACAGTGGTCATACTTGGCTCAAATAGGATTGCCTCAGTGGAGGGTACCTGTGGTTTAAACTA AAAAAAGTAGCACTAATGATGAGTTTGTCTGTATACATCCCTTTAACATCGTTGGTGAAGTGGAGGATTAAATATTAGAC TGAATTATGAAGACCACCCTCAACTCAGGGTCATGTGCAATTTTCCCCCGAGTGTTCCCAGAACAATGAAGCCCCTAAAT CAATGACTGTGTGAACCATGCCTGTGTCTATCTCATTTGAATAGTTAAAAAATTGTGCATGTATCATACAATACTAGATA TTAAAAACTTCAGAAATACAGGTAGAAGCCCCTGAAGATATTTTAAGGCCTATCAAGGTGGGGCAGTCATCGTCTCTAAA AGTTGGGCAGCAGTGTTTGGCAATTGGAAATCCGTTTGGCTTTGATCACACCCTCACAGTTGGGGTTATCAGTGGACTTA ACCGAGACATCTTTAGTCAAACCGGTGTCACAATTGGTGGCGGTATTCAAACTGATGCAGCAATAAATCCCGGGAACAGG TTAAAGAGGCTCCCTTTCATATCTGAACTAGGAATGGTTCCCTTTCCGTTGTTGCAATTCACTTTGTCAAGAAGTTGTTC TCTTCATTTTGGTGTTAACTAGTGCTGTTTCTTACTTTTCCTGTGACTCTAATAGTGGAGGTCCTCTCCTGAATTCGAAA GGAAGCTTAATTGGGATTAATACTGCAATATTTACTCAGACAGGCAAGTTTCTTTATCTTTGTTGCCACCACAATCAGAA GGCGTTGGACTACATTACAAAATATTGATGTATGTTTCATATGATAGCAGAGGAAATCATTTCAAAATTTAGAATATTGA ATGTTACATTGTTGGTCTATGAGCCCGTTTAAGGATGCGGACTAAAGAACACTTATTGGAGTTTACCTATTAGAAAAAGC ACTAGATAATCTCCAATAAGTGCTCTCTCGTCTGCATCCAAACAGACTTTATAAGCCACAAGTTCTGGTTACCCTAATAT AGCTTTGCACGCTTCACTTTTATTGCAGGAACATCAGCTGGTGTTGGATTTGCCATCCCATCTTCGACTGTACTTCGAAT TGTTCCTCAATTGATTCAATATGGAAAAGTAAGTGGAACATCACACCACACACAGGAAAAACAGTACCTTTTATCTATTC TATATATTGGCGTGCATGTTTTTTAGCTCTATATTTTTGTAAGATCTATAGTATATACCCATATCTGAGTCCATGGTTCA TCAATTTAAGGTTGTTAGAGGTGGTTTGAATGTGGATATTGCTCCTGACTTAGTTGCCAATCAACTTAATGTTCGAAATG GGGCTCTTATTCTTCAGGTAAGTCCATCAGATTTTTTTTTTGCTTTACTGCAATTGAACTTTGTATTTATAGTTTCTTCG AAATCGTTCTTTAACTCCCAAGTACTTGTGTTCTTTAGGTTCCTGCAAATAGTCCTGCTGCCAAAGCTGGGCTAATTCCC ACGACAAGGGGCTTTGCCGGTAATATAGTCCTTGGAGATATCATTGTTGCAGTTGACAATAAACCTGTGAGCCTTCTTTT GCAGAAACTGTTTATTAATTGTTTAAACCATTCTCTTTCAAAGGCCAAGATAATCATGTTATATGGTAAACCTTTATTTT ATTGATCTATAAATAAAACACAAATATTGCTTTCATAATTCATACACATTACACAACATGTCTAAGTAGACAAGGTGATA ATTCATGAATTTGATAATTTGGGTGCATCCTTTCCAGGTGAAGAGCAAAGCAGAATTGTTGAAAGCATTGGATGACTATA ATGTAGGAGATAAAGTAATCTTGCTCATTCAGAGGGGTAGTGAAAAGTTGGAGGTGCCTATGCTACTTGAGGAACAAAAA TCTTGAGAGTTGAGACGTTCTAATATGCACTGATGATATATTATAATCCACTCATTATGTTTGTAGAAATGTATTATGCA TTAAACAAAAAAGAAAAGAAATTATATTTGTGCATAAAGTATTCATGTAGGGAAAGGAATAAGTATTTATTAAATGACCA TTTTCTTCCAAGTTTGATAAATCTTA
CDS sequence (LotjaGi2g1v0259100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAAGTGTCAGCATGCAATTTGTGGTCTCCGGGAGTGCCACCTCAGGCTCACAGAAGCACTGTTCTCAGCCGCCGGAA GATCTGCTTTGATGGCCTATCCTGTGTGTGCCGCTCTCACTCCCAACACTTCCCAAACGACACCGTTTCCTCCCAACCCA TCTCCATTTCAAGGCCAGTTCAAGATGAATCACAGGATTTTGAAGCAATGCTGAGTAAAGAAATTATGTCCCCGACACGA CGTGTGTTAATTGCGAGCTTGACTATGTTTTCCTGTTTCCAATCTTCAAGGTACTTGTCAGCCTTAGCATTGGGAGATCC ATCAGTGACACTTGAACAAGTGACTCCTCCTGTGTTTCCTTCTGGGCCACTCTTTCCTGCAGAGGATCGAGTTGTTCAAC TATTTGAAAGGAACACGTACTCTGTTGTTAACATCTTCGATGTCACATTGCGTCCTCAACTTAATGTGACAGGTGTGGTT GAGATTCCTGAAGGAAATGGTTCTGGAGTAGTCTGGGATGACGAGGGCCACATTGTGACAAATTATCATGTAATTGGCAA TGCCCTTTCAAGAAACCCAAGCTCTGGTCAGGTTGTTGCACGAGTTAATATTCTAGCATCAGATGGGGTACAAAAGAATT TTGAGGCTACAGTCGTTGGAGCTGACCGTTTAAAAGATCTTGCTGTCTTGAAGGTAGAAGCCCCTGAAGATATTTTAAGG CCTATCAAGGTGGGGCAGTCATCGTCTCTAAAAGTTGGGCAGCAGTGTTTGGCAATTGGAAATCCGTTTGGCTTTGATCA CACCCTCACAGTTGGGGTTATCAGTGGACTTAACCGAGACATCTTTAGTCAAACCGGTGTCACAATTGGTGGCGGTATTC AAACTGATGCAGCAATAAATCCCGGGAACAGTGGAGGTCCTCTCCTGAATTCGAAAGGAAGCTTAATTGGGATTAATACT GCAATATTTACTCAGACAGGAACATCAGCTGGTGTTGGATTTGCCATCCCATCTTCGACTGTACTTCGAATTGTTCCTCA ATTGATTCAATATGGAAAAGTTGTTAGAGGTGGTTTGAATGTGGATATTGCTCCTGACTTAGTTGCCAATCAACTTAATG TTCGAAATGGGGCTCTTATTCTTCAGGTTCCTGCAAATAGTCCTGCTGCCAAAGCTGGGCTAATTCCCACGACAAGGGGC TTTGCCGGTAATATAGTCCTTGGAGATATCATTGTTGCAGTTGACAATAAACCTGTGAAGAGCAAAGCAGAATTGTTGAA AGCATTGGATGACTATAATGTAGGAGATAAAGTAATCTTGCTCATTCAGAGGGGTAGTGAAAAGTTGGAGGTGCCTATGC TACTTGAGGAACAAAAATCTTGA
Protein sequence (LotjaGi2g1v0259100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQVSACNLWSPGVPPQAHRSTVLSRRKICFDGLSCVCRSHSQHFPNDTVSSQPISISRPVQDESQDFEAMLSKEIMSPTR RVLIASLTMFSCFQSSRYLSALALGDPSVTLEQVTPPVFPSGPLFPAEDRVVQLFERNTYSVVNIFDVTLRPQLNVTGVV EIPEGNGSGVVWDDEGHIVTNYHVIGNALSRNPSSGQVVARVNILASDGVQKNFEATVVGADRLKDLAVLKVEAPEDILR PIKVGQSSSLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSQTGVTIGGGIQTDAAINPGNSGGPLLNSKGSLIGINT AIFTQTGTSAGVGFAIPSSTVLRIVPQLIQYGKVVRGGLNVDIAPDLVANQLNVRNGALILQVPANSPAAKAGLIPTTRG FAGNIVLGDIIVAVDNKPVKSKAELLKALDDYNVGDKVILLIQRGSEKLEVPMLLEEQKS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 459 | 459 | 1.0E-236 | – | |
| PANTHER | 1 | 459 | 459 | 1.0E-236 | – | |
| Gene3D | 123 | 242 | 120 | 6.7E-33 | ||
| SUPERFAMILY | 127 | 362 | 236 | 3.44E-52 | ||
| Pfam | 167 | 318 | 152 | 8.7E-31 | – | |
| PRINTS | 176 | 188 | 13 | 1.2E-34 | ||
| Gene3D | 243 | 356 | 114 | 9.0E-41 | ||
| PRINTS | 252 | 276 | 25 | 1.2E-34 | ||
| PRINTS | 289 | 306 | 18 | 1.2E-34 | ||
| PRINTS | 311 | 328 | 18 | 1.2E-34 | ||
| SUPERFAMILY | 327 | 456 | 130 | 4.39E-15 | ||
| ProSiteProfiles | 348 | 446 | 99 | 9.149 | ||
| SMART | 357 | 446 | 90 | 9.5E-5 | ||
| Gene3D | 357 | 460 | 104 | 2.4E-34 | ||
| CDD | 361 | 453 | 93 | 3.4801E-18 | – | |
| Pfam | 375 | 453 | 79 | 1.5E-12 | ||
| PRINTS | 404 | 416 | 13 | 1.2E-34 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of LotjaGi2g1v0259100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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