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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0246100 |
| Transcript ID | LotjaGi2g1v0246100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine protease; TAIR: AT3G27925.1 DegP protease 1; Swiss-Prot: sp|O22609|DEGP1_ARATH Protease Do-like 1, chloroplastic; TrEMBL-Plants: tr|I3S8D7|I3S8D7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0246100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:71150421..71157784) extracted from Lotus japonicus Gifu genome v1.2.
TTTACGTAGTTCGTAACTGATGTTGGTGATATGCGGGCATTCTGAGAACTTACTCCAGTTATAGTTCTCAAAACGTTGCC GGTTGATATTCTTAGAAGAACAAGATGAGTCCCTAATTAATGAGGTACTCTACTTAAAACCTGGCCTTTATGTGCTTATG GATTTTGTTCCGCGATGGATAATCATTATCTTATTGAAACAAAATCGTAAACTTAGAGTAAGGGACTAAGGTTCATAGAA TTCAAACATGGAGATTGGATACTAGAACATCCCTTAACAACTATACCAGAAGTTGTGGGGGCATTTAGTCAAATGACAAT AATTATCAACATCACCATTATAGGACTTAAATGAATAATATATCATAATAGACGTGAAAACAACACTAGAATCCAAAGCA GCAGATATGACGTAGGTGTATTCCGCCCACCATAACTTGTGAATTTCGCAAAGGTAGAAGACGACGATTCCAAAAAGTAA TGAAATTTATTGATTTTGCTGGTGGAATATCATTTCCACGCACCTGCAATGATGAGGAGCATGTTAATGTCGTTATCCAC TTTTGATGGGGAATATATTTTACAGGAGCACATTGGCGCAGCGGAGAGTAGAACAAAGTTGAAAAGTCATTCCATTCCCG GGTAAATTCCATCATTCGTAAAAACTCTATGTGGTCCCAATGCTTTCCATATGATTAAAGTTTTGTATGACATTACTAGG GCAAGTCATTGTTCGTCTATCACAAATGTTTGGAATCGTGTTGAGAAGCCACCATGACGTGCCAAAACGAACATTTGAGG AAACTAGAGCTCCTACAACCTGAAGAAGAAAAACGAAATAAATTGCCACAAGTTAGATAAGTTGTAATATTCCTCTTTGA TTATTGATTTGTAAAACAATCTTAAGTTTAAACAAAATCATGTTTGATTTGTTTAAACTTAAGATTGTTTTATAAATCAT TAGTTAAAGAGGAATATTACAATATATCTAACTTGTGGCAAATTCCTTCGTTTTTTTTCTTCAGATTGTCGCAACTCTAG TTTCTTCAAGTGTCTGTTTTGACACACGATGGTGGCTTCTCACAACAATTCCAAACATTTGTGATTGATCGACAGGGAAT TTTCCTAGTAATGTCATGCTTTACCAAGCTTCAATCATATGGGGAGTAGTAGGACTACAAAGAGTTTTTACGAAAGATGG AATTTATCCGGGAATGGAATGATTTTTCCTCTTTGGTCTACTTTTCCCTGCGCCAGTGTGACTTATGACAAAAATATTCC CAACCAAAAGTGGATTAAGTACATTCACGTATCTCTCATCATTTCAGGTGTCAGTGTTATTCCAATATCAAAATCAGTAA ATTTCATTATAAGGGAGTTGTTGGAATCGTCTTCTTCTACCTTTACAAAATGCAGAAGTCATGGTGGGCAAAATACACTT ATATCATATCTGCCGCTTTGGATTCTAGTGTTGCTTTCATGTTTATTATGATCTATTATTTATTTAAATCATATAATGGT GATGATGTTGATGGTTACTGTCATTTGGCCGAATACTCCACAACTTCTAGTATAGTTTTTTAGAGATGTTCTGCTATCTA ATTTCCATGTTTGAATTCTATGCCTCTGAAGTGTGTGCTTCTTATCCGATTAGTTGTACATGAGCTCTTCCCACAAATGC TTGCCGTCAAAGGAGGGGATTGGTGACCTCTGCTGCTTGTGTTATTTGCAATAATGGAGATAAATCTGTTTTGCACTGCT TTTGCGATTGCACGATGGCTATAGGTGTTTGGTCTCGATTAGGTTTCAAAACTTCAGGTTGTGTGAGCTGCTAGTTGATT CCGACCCCTTAGTTGCAGCTACGTTGTGGTGGATTTGGCGCACGAGATGTTCCTTCTGCATGGAGAATACAATGATGAGT TCACACGCTGTGGCTTCTAATATTGCAGGCGTGGATAATGATTTAAGGCGCTACTTTGGTGAACCCTTTAGTGCTCCTCA AGCTTCCCCAAGGCTGGTGCGTTGGCTTCCCCGTGTTGGTGATAACTTGGTGGTTAATGTCGATGGTAATGTGTGGGACA TCACAAGAGGAGGTGGGTTTACTGGCGGCTTCCGTAGTAGCTTTAGCCGGCGGTTTGGCAGATTCTATGGCTTCCAAGAT GACCCAAATATCTTGCATCTTGAGCTGCTTGCTATCTATTATGGGTTGAGTTCGGCTTGGGACCGTGGTGCTCGTACTGT GAAATGTCAATCTGACTCTCTAGACGCAGTTACCTTGGTGAATTCCTCTCCTTCTTCTTCAAAACATATTTATGCTTCTC TCATTTAGGATATAAAGGATTTATTATGTCATGATTGACGAGTGGAGGTGTATAAAATATTATTCATTGTAACTTTATTT ATATTTATATTTATTATTCTTATTTTAACTAAAGCTCCATCACACACAAAGACACATGGCTGAATGAGTCAAACAAAACA AAACATGATCCAACACTTCAACCTCATTACCATTCACAGTGGTCATCACCTCACTCCTTAGTCCAACCGAAATCAATGGC TGCATCTACAGCCTCTGCACTCATCACATCCTCCTCACTCTTCCATCTCCGCTCTCGCTCTCGCTCCGCCGCATTTTCTC GCTCCTCCTCCTCAACCACCAAACCCACCTTCCATCTCTCAAAATCTCTCCATCTCCACACACCCCATCACCCCATTTCA CACCCCACTCTCTCACTCCTTCAATCTCCCACTCCCAAAACCTGCTTCGATTCCGCTCTCATTCTCTGCACTTCCCTCGC CCTCTCCTTCACCCTCTTCTTCACCAACACTGATTCCGCCTCCGCCTTCGTCGTCACGCCGCCGAGGAAGTTGCAGTCCG ATGAACTCGCCACTGTTCGTCTCTTCCAAGAGAATACTCCCTCTGTTGTCTACATCACCAACCTTGCTGTCAAGTAACAT TTTCAGTGTTTATTGTTGCTGTTTTAGGATACCCTTTTGCTTTGTTTTGTGTTTTTGAATGTGGGTTTTTTGTGTTTAGG CAGGATGCGTTTACGTTGGATGTGTTGGAGGTTCCTCAAGGATCTGGGTCTGGATTTGTTTGGGATAAGGAAGGGAATAT TGTGACCAATTATCACGTTATTCGGGGTGCTTCTGATCTCAGGTTGGTTGCTTCTGCATTAGACTTGTACTCTATGCATT TTGTTTCTAGTTTGACATGTCTGATTTTGAGTCATATGATGCTGGCAAGTGGTAACTTTTATGTTATGCACCTAAATCTG TACATGTTATATATAATGTAACTCATCTAATGTTAAATGGATGATGTAATTTAACTTATGAAACAAAAGGGAGTTGGTAA TAATGTTGTATGGGAGCACAAACACTTCAAAATACTAGTTATGTCATAGCTATGTTAATACTTTTATTTTGTAAGACATT TGAAGGACACTTGTATTTTACAGTTTTTTCCTCTTTTTCTAAACTTCTATACCAAATAAGTGCAATACCACAGTATTTAG GTAAATTCTAGAATTTTGGGACTTGGGATGCCACAATAGTTAGATAAATGGCAGACTTTAACTGAATTCATTGAGGAGAA AGTTTGACAGTAGCTAGATACACATTTTGGGACTTGGGATGGCTTAAAATGTGAGCGAATTTATTTCTTTTGTTCAATGA GATGCTAGTTATGTGCAGGGTCACCCTTGCTGACCAGTCAACCTATGATGCAAAAGTTGTTGGTTTTGACCAAGACAAGG ATGTTGCTGTGTTACGTGTTGACGCGCCAAAAGACAAGCTGAGGCCTATACCTGTTGGGGTCTCTGCAAACTTGCTTGTT GGTCAGAAAGTGTATGCTATTGGGAACCCGGTGAGATGTCCCTGCATATTGATGCATGTTGTATTGTAAACATGTATTCT CTATGATTTTTCCAATCTAGAGATGTGATGACAATCGTGTTTGAATTTACTATTAGTTAGAGCTTCAAAGAAAGTTAGAA TTTTTATAATCAACGGGATTTCAAACTTTCCTAAATATTTTTTTAACAGTTCACTCGTTTGATCTAACATATAGTTTTTG TAATTATGTATTCATTTAGTCAGTGTAGCTTGCTTCTGTTGTAATTCCGCACTGTCTCTGCTAACATTTATGTTAAACAA ATATTGGAGATCTTAGTTACTGATGCCTCTGATGGAAACCTAGATTTGTAGCCCTTTCTGTTCCTCAAAATCTGGATGAG TTCCGTTCTGCATCACTATCTAAAAGTATTGTGTGGGTTTCGCTTTTTTTTTAAATGAGGGACTCACCTACTAAGAGAGG GATGGATAAAAAACCAGAAAATATGGCTGGTACCTAGTTTTCTTTGGACCTTTTGCCTTGTGAATTGCTGCCATATGCTT TATGTAGATTTTAATCATTCCTGACTTGAATGCTATTTGTTGTTGTCTTGTTGATGATTGAATACAGCATTACTGACTAC GTCATGAATATGACAATCTGATTCTTATATTGCAGTTTGGACTTGACCACACTCTTACAACTGGTGTCATCAGGTATGAA TTGAAAACCTTGAAGTGAATATTTTAATGTAACTTTTCACCTCCTCATCATTCATCAACTATGAAAAGAGTTTCTACTTT GCTATTCCTTTTCCTTTTCTCATGTGGGTTATACATGCTAAAACATTTTATGTAGGTGTCTAAAAATAGCAATGATAGTC ATCTTGTTCTCAATGCATTCCGAATATCAATTTTTCTAATTAGCAGCACTAGGGATGACGACCGGAAGACATTGACATTC ATCATTTTCATTAACATCTGTCTGATGTTTATGCAAAATTTAAGTAAAATAATGATAAATGAGACTGCATCCATTGTACT AAAAATAAATAATGTGACTGCTTCAAGTTTCAATCTGCATACAATTACTCACAAATAAAATAAATGAGGGGGAGTAGGGT TCAAGAATTAGACAAAAAGACATTTCGTATTATAGAAACTCTTGTGAAAAATCGTATTGTTCTTCAAATGGTGCACCTCT AATCCCTTTGCTGAATTAAAGACAAGTCATAGTTCCTGCAACATCTTCTCTTCCTTTTCTTTGAAAGTTCAACTTTAAGC AAGACAAATCATATGGTAAATCCATATTGTTTTTTTAAACGTATGCATGTTAAACACATACTATACTTATGCTGAAAAAC CCGGGTGAGAAATGTTTGATTTATTTTATTACAATTTTCCTTTTGTATTGATTGCATTTTTTGATACATCTCAATAGTGG ACTTCGGCGAGAAATTAGTTCCGCTGCTACTGGTCGTCCAATTCAAGATGTTATACAGACAGATGCAGCTATTAATCCTG GTAACAGTGGAGGGCCACTCCTAGATAGTTCTGGAAACCTCATTGGGATAAATACAGCTATATACTCCCCATCTGGTGCA TCCTCTGGTGTTGGATTTTCTATTCCAGTGGATACTGTGAGCTTTGAATCTTCTCTTTCTTTGCCTAATTCTTCCTTCAC AAAGACATCTTTCCGTTTAAACACATCTTTCTTTTTTCATATTTTCTATAATAACTCACGTGCTTTTTATTTTATATATC TAGGTAAATGGCATTGTTGACCAGTTGGTGAAGTTTGGGAAGGTGACAAGACCTATTTTAGGTATCAAGTTTGCTCCAGA TCAGTCTGTGGAGCAGTTAGGGGTAAGTGGAGTCCTCGTCTTGGATGCTCCTGCCAATGGTCCAGCCGGAAAAGCAGTAA GTTAATTCTTTATATCTGTAAATGATGAAGTTCATTCTTATTAGAGTCAAGCCAAAAGCTCTAATAGTAGCATGGATTAC ATATTAACATAAAAACATCCTATTTACTTCCACCAAACCCACTCAAGCTTGTCTCAAATACTGGTCCAAGGACCTATACA ACACTCAATTTTTCTTATGTGAGCTTCATTTATATGGTGTCTTATTTTATGTCACTCTTTGAAATGGTTGAATTATTCTT TTACAATTTTCCAATGGTTAGGGATTTGGCTGATGGAGCTGGTCAAATTTCTATTTTGTAGGGCTTGCAATCAACAAAGC GTGATTCATATGGTAGACTCATTTTAGGAGACATCATAACATCTGTGAATGGTACGAAGGTTACTAATGGAAGTGATCTG TACAGAATTCTTGACCAGTGTAAAGTGGGTGATAAGGTATGGTGCTGATCCATTTTCTCTGTTACTCTTGTGTCTCTTTG GAATGTCTCATTTGTTAATTTCAATATAAGGTAGCTTTTTCCATTTGAAAAATTCTTATTAAAATCCTGGGGTTTCCCAT AAAAAAATGGAACATGTTCAAATTTGATTGATCTTTATGTTTAAGGATATGGTTGACACAATAATCAGCAACAACAACAA CCAAAGCCTCTTTTCCCATTAGGTGGGGTCAACTATATGGACAGCATTATGCCACAATGTCCTACCATGAATTAAGTCTA ATGACAGGCTATGTCATTCTAAATCTCTCTTAATTGTTTAACCTACAACTTTTCTTGGTCTTCCTCTTGCTCTAGTTGTT AGATTATCTTTTATCTGGTCTACCTTCTTTACAGGTGCTCCTACATATCCAATCCATTGATGACCAAACCACCTAAAGAC AAGACCGCTATCATCTTTTATACAATGAGAGCTACCCCAATTTCCTCTCTGATGATTTCATTCATAATCCCATTGTCCTG TGTGATCATTCCTCCATCAGATTATAACATTAGCCTTACTTTCTCGTTGGTTCTTTACCGTCCAATATTCTATCCGTGAA GATTTGTAGGGGTCTTATAGCAGTACAGTAAAAAAATTCTTTTAAATATGTAGTTATAGAAGTTCCTCTACATATTAAGT TACATTGCCCAATCTGAAGCTGATTAATTATCCTAGTTTGATACTTAAGATGTTAATATTCAGGTGACTGTGGAGGTTTT GCGAGGTGACCACAAGGAGAAGATCCCTGTCATCCTGGAGCCAAAGCCAGATGAATCATGATATGCAAGTCATTCAGCGT GTATATACACATTTCTTGTGCCAGGGAATGCAGCTGTTTTGTGTGTATTCTTAGGTTGTTTCCCTATAAAGGATCACCTA AATGTAAATATGTATGTACTACAGGACTGGCACCTGATCGATCTTCCATGAACTTTTTGATTACTGAACTTGTTGTAACT AGTCACGTCTATTTGCTCTAATACAAGTCCAGAGAAAGGGGAGCTTGATAAGAAACATCATGTTATTCAATCTATGCTCA TTGCGGTTAAGATTAGTTCACTTACATGGAAAATGATTATGTTTGCTTTTTCTTTTAGGGTGAAATGATTATTTTTTCTT TCTG
CDS sequence (LotjaGi2g1v0246100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGCATCTACAGCCTCTGCACTCATCACATCCTCCTCACTCTTCCATCTCCGCTCTCGCTCTCGCTCCGCCGCATT TTCTCGCTCCTCCTCCTCAACCACCAAACCCACCTTCCATCTCTCAAAATCTCTCCATCTCCACACACCCCATCACCCCA TTTCACACCCCACTCTCTCACTCCTTCAATCTCCCACTCCCAAAACCTGCTTCGATTCCGCTCTCATTCTCTGCACTTCC CTCGCCCTCTCCTTCACCCTCTTCTTCACCAACACTGATTCCGCCTCCGCCTTCGTCGTCACGCCGCCGAGGAAGTTGCA GTCCGATGAACTCGCCACTGTTCGTCTCTTCCAAGAGAATACTCCCTCTGTTGTCTACATCACCAACCTTGCTGTCAAGC AGGATGCGTTTACGTTGGATGTGTTGGAGGTTCCTCAAGGATCTGGGTCTGGATTTGTTTGGGATAAGGAAGGGAATATT GTGACCAATTATCACGTTATTCGGGGTGCTTCTGATCTCAGGGTCACCCTTGCTGACCAGTCAACCTATGATGCAAAAGT TGTTGGTTTTGACCAAGACAAGGATGTTGCTGTGTTACGTGTTGACGCGCCAAAAGACAAGCTGAGGCCTATACCTGTTG GGGTCTCTGCAAACTTGCTTGTTGGTCAGAAAGTGTATGCTATTGGGAACCCGTTTGGACTTGACCACACTCTTACAACT GGTGTCATCAGTGGACTTCGGCGAGAAATTAGTTCCGCTGCTACTGGTCGTCCAATTCAAGATGTTATACAGACAGATGC AGCTATTAATCCTGGTAACAGTGGAGGGCCACTCCTAGATAGTTCTGGAAACCTCATTGGGATAAATACAGCTATATACT CCCCATCTGGTGCATCCTCTGGTGTTGGATTTTCTATTCCAGTGGATACTGTAAATGGCATTGTTGACCAGTTGGTGAAG TTTGGGAAGGTGACAAGACCTATTTTAGGTATCAAGTTTGCTCCAGATCAGTCTGTGGAGCAGTTAGGGGTAAGTGGAGT CCTCGTCTTGGATGCTCCTGCCAATGGTCCAGCCGGAAAAGCAGGCTTGCAATCAACAAAGCGTGATTCATATGGTAGAC TCATTTTAGGAGACATCATAACATCTGTGAATGGTACGAAGGTTACTAATGGAAGTGATCTGTACAGAATTCTTGACCAG TGTAAAGTGGGTGATAAGGTGACTGTGGAGGTTTTGCGAGGTGACCACAAGGAGAAGATCCCTGTCATCCTGGAGCCAAA GCCAGATGAATCATGA
Protein sequence (LotjaGi2g1v0246100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAASTASALITSSSLFHLRSRSRSAAFSRSSSSTTKPTFHLSKSLHLHTPHHPISHPTLSLLQSPTPKTCFDSALILCTS LALSFTLFFTNTDSASAFVVTPPRKLQSDELATVRLFQENTPSVVYITNLAVKQDAFTLDVLEVPQGSGSGFVWDKEGNI VTNYHVIRGASDLRVTLADQSTYDAKVVGFDQDKDVAVLRVDAPKDKLRPIPVGVSANLLVGQKVYAIGNPFGLDHTLTT GVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGNLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK FGKVTRPILGIKFAPDQSVEQLGVSGVLVLDAPANGPAGKAGLQSTKRDSYGRLILGDIITSVNGTKVTNGSDLYRILDQ CKVGDKVTVEVLRGDHKEKIPVILEPKPDES
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 24 | 24 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 4 | 4 | - | – | |
| Phobius | 5 | 16 | 12 | - | – | |
| Phobius | 17 | 24 | 8 | - | – | |
| PANTHER | 22 | 430 | 409 | 5.2E-220 | – | |
| PANTHER | 22 | 430 | 409 | 5.2E-220 | – | |
| Phobius | 25 | 431 | 407 | - | – | |
| Gene3D | 95 | 211 | 117 | 4.6E-45 | ||
| SUPERFAMILY | 114 | 319 | 206 | 1.02E-58 | ||
| Pfam | 149 | 288 | 140 | 4.7E-36 | – | |
| PRINTS | 158 | 170 | 13 | 1.8E-47 | ||
| PRINTS | 179 | 199 | 21 | 1.8E-47 | ||
| Gene3D | 212 | 326 | 115 | 2.1E-41 | ||
| PRINTS | 221 | 245 | 25 | 1.8E-47 | ||
| PRINTS | 259 | 276 | 18 | 1.8E-47 | ||
| PRINTS | 281 | 298 | 18 | 1.8E-47 | ||
| SUPERFAMILY | 285 | 415 | 131 | 1.45E-16 | ||
| ProSiteProfiles | 318 | 415 | 98 | 11.059 | ||
| CDD | 327 | 422 | 96 | 3.63337E-18 | – | |
| Gene3D | 327 | 431 | 105 | 2.5E-44 | ||
| SMART | 327 | 415 | 89 | 7.2E-10 | ||
| Pfam | 327 | 423 | 97 | 9.6E-15 | ||
| PRINTS | 373 | 385 | 13 | 1.8E-47 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of LotjaGi2g1v0246100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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