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The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.
We have found 33 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.015s to perform.
| Transcript | Name | Description | Chr | Start | End | Strand | Domain predictions | GO predictions |
|---|---|---|---|---|---|---|---|---|
| n.a. | Transport protein sec31 isoform 1 [Theobroma cacao] gi|508702955|gb|EOX94851.1| | chr0 | 25566523 | 25571964 | - | – | ||
| n.a. | PREDICTED: probable alpha-ketoglutarate-dependent dioxygenase ABH6-like [Glycine max] gi|356559947|ref|XP_003548257.1| | chr0 | 169900726 | 169904539 | - | – | ||
| n.a. | PREDICTED: alpha-ketoglutarate-dependent dioxygenase AlkB homolog [Glycine max] gi|356573293|ref|XP_003554797.1| | chr1 | 62151152 | 62155688 | + | – | ||
| n.a. | Alkylated DNA repair protein alkB-like protein [Medicago truncatula] gi|357484481|ref|XP_003612528.1| | chr2 | 24992548 | 24998143 | - | – | ||
| n.a. | PREDICTED: alkylated DNA repair protein alkB homolog 8-like isoform X2 [Cicer arietinum] gi|502161954|ref|XP_004512340.1| | chr2 | 24992548 | 24998143 | - | – | ||
| n.a. | PREDICTED: alkylated DNA repair protein alkB homolog 8 [Vitis vinifera] gi|225437314|ref|XP_002263866.1| | chr2 | 40247570 | 40250482 | + | – | ||
| n.a. | Alpha-ketoglutarate-dependent dioxygenase alkB-like protein [Medicago truncatula] gi|357470119|ref|XP_003605344.1| | chr3 | 17987186 | 17991116 | - | – | ||
| n.a. | Alpha-ketoglutarate-dependent dioxygenase alkB-like protein [Medicago truncatula] gi|357470119|ref|XP_003605344.1| | chr3 | 17987791 | 17991116 | - | – | ||
| n.a. | hydroxyproline-rich glycoprotein-like protein [Arabidopsis thaliana] gi|18394153|ref|NP_563957.1| | chr4 | 33425729 | 33435882 | - | – | ||
| n.a. | Alkylated DNA repair protein alkB-like protein [Medicago truncatula] gi|357462995|ref|XP_003601779.1| | chr4 | 34283615 | 34287441 | + | – | ||
| n.a. | PREDICTED: RNA demethylase ALKBH5-like [Cicer arietinum] gi|502125179|ref|XP_004498830.1| | chr5 | 4623262 | 4627624 | + | – | ||
| n.a. | Transport protein sec31 isoform 1 [Theobroma cacao] gi|508702955|gb|EOX94851.1| | chr5 | 24075860 | 24081335 | - | – | ||
| n.a. | PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 2-like [Cicer arietinum] gi|502079759|ref|XP_004486359.1| | chr6 | 19399279 | 19400847 | - | – | ||
| n.a. | PREDICTED: RNA demethylase ALKBH5-like [Cicer arietinum] gi|502076939|ref|XP_004485500.1| | chr6 | 26356198 | 26359084 | - | – | ||
| n.a. | RNA-binding (RRM/RBD/RNP motifs) family protein; TAIR: AT4G02485.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|Q9UT12|YLW2_SCHPO Uncharacterized protein P8A3.02c; TrEMBL-Plants: tr|I1M6V8|I1M6V8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0038300 | LjG1.1_chr1 | 5319954 | 5326481 | + | – | ||
| n.a. | 2OG-Fe(II) oxygenase family oxidoreductase; TAIR: AT4G02940.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein; Swiss-Prot: sp|Q01118|SCN7A_HUMAN Sodium channel protein type 7 subunit alpha; TrEMBL-Plants: tr|V7CZP5|V7CZP5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0731100 | LjG1.1_chr1 | 130279807 | 130285637 | + | – | ||
| n.a. | Alpha-ketoglutarate-dependent dioxygenase AlkB like; TAIR: AT3G14160.1 2-oxoglutarate-dependent dioxygenase family protein; Swiss-Prot: sp|P05050|ALKB_ECOLI Alpha-ketoglutarate-dependent dioxygenase AlkB; TrEMBL-Plants: tr|A0A0L9TEQ1|A0A0L9TEQ1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0799900 | LjG1.1_chr1 | 137037820 | 137043664 | - | – | ||
| n.a. | RNA-binding (RRM/RBD/RNP motifs) family protein; TAIR: AT4G20350.2 oxidoreductase; Swiss-Prot: sp|Q3KRA9|ALKB6_HUMAN Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6; TrEMBL-Plants: tr|I3SBA3|I3SBA3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0165400 | LjG1.1_chr2 | 57503930 | 57510043 | + | – | ||
| n.a. | RNA-binding (RRM/RBD/RNP motifs) family protein; TAIR: AT1G31600.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q07G10|ALKB8_XENTR Alkylated DNA repair protein alkB homolog 8; TrEMBL-Plants: tr|I1L5A9|I1L5A9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0351300 | LjG1.1_chr2 | 82769653 | 82775600 | - | – | ||
| n.a. | RNA-binding (RRM/RBD/RNP motifs) family protein; TAIR: AT1G31600.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q07G10|ALKB8_XENTR Alkylated DNA repair protein alkB homolog 8; TrEMBL-Plants: tr|I1L5A9|I1L5A9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0351300 | LjG1.1_chr2 | 82770005 | 82775792 | - | – | ||
| n.a. | Alpha-ketoglutarate-dependent dioxygenase AlkB; TAIR: AT5G01780.2 2-oxoglutarate-dependent dioxygenase family protein; Swiss-Prot: sp|P05050|ALKB_ECOLI Alpha-ketoglutarate-dependent dioxygenase AlkB; TrEMBL-Plants: tr|A0A1J7IJV0|A0A1J7IJV0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0203300 | LjG1.1_chr3 | 29667139 | 29671438 | - | – | ||
| n.a. | Alpha-ketoglutarate-dependent dioxygenase AlkB; TAIR: AT5G01780.5 2-oxoglutarate-dependent dioxygenase family protein; Swiss-Prot: sp|Q5EAC5|ZN410_BOVIN Zinc finger protein 410; TrEMBL-Plants: tr|A0A1J7IJV0|A0A1J7IJV0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0203300 | LjG1.1_chr3 | 29667275 | 29671409 | - | – | ||
| n.a. | Oxidoreductase, 2OG-Fe(II) oxygenase family protein; TAIR: AT1G14710.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp|P89053|GB_RHCM6 Envelope glycoprotein B; TrEMBL-Plants: tr|A0A0B2R130|A0A0B2R130_GLYSO Uncharacterized protein; Found in the gene: LotjaGi4g1v0357600 | LjG1.1_chr4 | 73621448 | 73627866 | - | – | ||
| n.a. | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein; TAIR: AT1G14710.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp|Q94407|NHR48_CAEEL Nuclear hormone receptor family member nhr-48; TrEMBL-Plants: tr|K7KQ45|K7KQ45_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0357600 | LjG1.1_chr4 | 73621498 | 73627887 | - | – | ||
| n.a. | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein; TAIR: AT2G17970.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|Q3TSG4|ALKB5_MOUSE RNA demethylase ALKBH5; TrEMBL-Plants: tr|A0A0R0GNF3|A0A0R0GNF3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0049300 | LjG1.1_chr5 | 8340939 | 8345071 | + | – | ||
| n.a. | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein; TAIR: AT2G17970.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|Q08BA6|ALKB5_DANRE RNA demethylase ALKBH5; TrEMBL-Plants: tr|A0A0R0GNF3|A0A0R0GNF3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0049300 | LjG1.1_chr5 | 8340947 | 8344960 | + | – | ||
| n.a. | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein; TAIR: AT2G17970.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|Q08BA6|ALKB5_DANRE RNA demethylase ALKBH5; TrEMBL-Plants: tr|A0A0R0GNF3|A0A0R0GNF3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0049300 | LjG1.1_chr5 | 8340947 | 8344960 | + | – | ||
| n.a. | 2OG-Fe(II) oxygenase family oxidoreductase; TAIR: AT4G02940.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein; Swiss-Prot: sp|Q08BA6|ALKB5_DANRE RNA demethylase ALKBH5; TrEMBL-Plants: tr|I1JFD1|I1JFD1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0259300 | LjG1.1_chr5 | 56763159 | 56772170 | + | – | ||
| n.a. | Alpha-ketoglutarate-dependent dioxygenase alkB; TAIR: AT1G11780.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein; Swiss-Prot: sp|Q9SA98|ALKBH_ARATH Alpha-ketoglutarate-dependent dioxygenase alkB; TrEMBL-Plants: tr|I3T319|I3T319_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0097800 | LjG1.1_chr6 | 21222275 | 21226558 | - | – | ||
| n.a. | Alpha-ketoglutarate-dependent dioxygenase alkB like 3; TAIR: AT2G22260.6 oxidoreductase, 2OG-Fe(II) oxygenase family protein; Swiss-Prot: sp|Q9SIE0|ALKB2_ARATH DNA oxidative demethylase ALKBH2; TrEMBL-Plants: tr|I1L044|I1L044_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0282200 | LjG1.1_chr6 | 59858477 | 59860534 | - | – | ||
| n.a. | Alpha-ketoglutarate-dependent dioxygenase alkB like 3; TAIR: AT2G22260.6 oxidoreductase, 2OG-Fe(II) oxygenase family protein; Swiss-Prot: sp|Q9SIE0|ALKB2_ARATH DNA oxidative demethylase ALKBH2; TrEMBL-Plants: tr|I1L044|I1L044_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0282200 | LjG1.1_chr6 | 59858928 | 59860457 | - | – | ||
| n.a. | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein; TAIR: AT4G36090.2 oxidoreductase, 2OG-Fe(II) oxygenase family protein; Swiss-Prot: sp|D3ZKD3|ALKB5_RAT RNA demethylase ALKBH5; TrEMBL-Plants: tr|A0A151T7Y1|A0A151T7Y1_CAJCA Alkylated DNA repair protein alkB isogeny 5; Found in the gene: LotjaGi6g1v0360100 | LjG1.1_chr6 | 67155143 | 67158472 | - | – | ||
| n.a. | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein; TAIR: AT4G36090.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein; Swiss-Prot: sp|Q3TSG4|ALKB5_MOUSE RNA demethylase ALKBH5; TrEMBL-Plants: tr|A0A151T7Y1|A0A151T7Y1_CAJCA Alkylated DNA repair protein alkB isogeny 5; Found in the gene: LotjaGi6g1v0360100 | LjG1.1_chr6 | 67155842 | 67158350 | - | – |