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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • G3DSA:3.30.450.70
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 23 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.014s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v1363170.1
n.a. PREDICTED: trafficking protein particle complex subunit 2-like [Cicer arietinum] gi|502137185|ref|XP_004502999.1| chr1 16350263 16352559 +
1 domain prediction
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Lj1g3v1363170.2
n.a. PREDICTED: trafficking protein particle complex subunit 2-like [Cicer arietinum] gi|502137185|ref|XP_004502999.1| chr1 16350263 16352559 +
1 domain prediction
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Lj1g3v1486180.1
n.a. PREDICTED: trafficking protein particle complex subunit 2-like [Cicer arietinum] gi|502137185|ref|XP_004502999.1| chr1 17737133 17740432 +
1 domain prediction
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Lj1g3v2897290.1
n.a. PREDICTED: trafficking protein particle complex subunit 2-like protein-like [Glycine max] gi|356568553|ref|XP_003552475.1| chr1 32688015 32690999 -
1 domain prediction
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Lj1g3v4037140.1
n.a. PREDICTED: trafficking protein particle complex subunit 1-like [Cicer arietinum] gi|502180695|ref|XP_004516696.1| chr1 47701010 47706147 +
1 domain prediction
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Lj3g3v3237910.1
n.a. Trafficking protein particle complex subunit [Medicago truncatula] gi|357521045|ref|XP_003630811.1| chr3 39923887 39927515 +
1 domain prediction
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Lj6g3v0315170.1
n.a. Trafficking protein particle complex subunit [Medicago truncatula] gi|357521045|ref|XP_003630811.1| chr6 3124939 3127496 -
1 domain prediction
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LotjaGi1g1v0326200.1
n.a. Trafficking protein particle complex subunit 2; TAIR: AT1G80500.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q3T0F2|TPPC2_BOVIN Trafficking protein particle complex subunit 2; TrEMBL-Plants: tr|I3SKY8|I3SKY8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0326200 LjG1.1_chr1 77955548 77958247 -
1 domain prediction
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LotjaGi1g1v0326200.2
n.a. Trafficking protein particle complex subunit 2; TAIR: AT1G80500.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q3T0F2|TPPC2_BOVIN Trafficking protein particle complex subunit 2; TrEMBL-Plants: tr|I3SKY8|I3SKY8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0326200 LjG1.1_chr1 77955895 77957857 -
1 domain prediction
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LotjaGi1g1v0326200.3
n.a. Trafficking protein particle complex subunit 2; TAIR: AT1G80500.1 SNARE-like superfamily protein; Swiss-Prot: sp|P0DI81|TPC2A_HUMAN Trafficking protein particle complex subunit 2; TrEMBL-Plants: tr|A0A151T4B6|A0A151T4B6_CAJCA Trafficking protein particle complex subunit 2; Found in the gene: LotjaGi1g1v0326200 LjG1.1_chr1 77955895 77957857 -
1 domain prediction
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LotjaGi1g1v0335900.1
n.a. Trafficking protein particle complex subunit 2; TAIR: AT1G80500.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q3T0F2|TPPC2_BOVIN Trafficking protein particle complex subunit 2; TrEMBL-Plants: tr|A0A0L9UER7|A0A0L9UER7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0335900 LjG1.1_chr1 79543023 79546781 +
1 domain prediction
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LotjaGi1g1v0335900.2
n.a. Trafficking protein particle complex subunit 2; TAIR: AT1G80500.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q3T0F2|TPPC2_BOVIN Trafficking protein particle complex subunit 2; TrEMBL-Plants: tr|A0A0L9UER7|A0A0L9UER7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0335900 LjG1.1_chr1 79544535 79546159 +
1 domain prediction
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LotjaGi1g1v0491600.1
n.a. Trafficking protein particle complex subunit 2-like protein; TAIR: AT2G20930.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q54CU7|TPC2L_DICDI Trafficking protein particle complex subunit 2-like protein; TrEMBL-Plants: tr|I1N439|I1N439_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0491600 LjG1.1_chr1 100510628 100515140 -
1 domain prediction
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LotjaGi1g1v0491600.2
n.a. Trafficking protein particle complex subunit 2-like protein; TAIR: AT2G20930.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q54CU7|TPC2L_DICDI Trafficking protein particle complex subunit 2-like protein; TrEMBL-Plants: tr|G7KTB1|G7KTB1_MEDTR Trafficking protein particle complex subunit-like protein; Found in the gene: LotjaGi1g1v0491600 LjG1.1_chr1 100513909 100514949 -
1 domain prediction
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LotjaGi1g1v0652600.1
n.a. Trafficking protein particle complex subunit-like protein; TAIR: AT1G51160.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q5NCF2|TPPC1_MOUSE Trafficking protein particle complex subunit 1; TrEMBL-Plants: tr|B7FHC8|B7FHC8_MEDTR Trafficking protein particle complex subunit-like protein; Found in the gene: LotjaGi1g1v0652600 LjG1.1_chr1 121194246 121200589 +
1 domain prediction
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LotjaGi1g1v0652600.2
n.a. Trafficking protein particle complex subunit-like protein; TAIR: AT1G51160.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q557G3|TPPC1_DICDI Trafficking protein particle complex subunit 1; TrEMBL-Plants: tr|B7FHC8|B7FHC8_MEDTR Trafficking protein particle complex subunit-like protein; Found in the gene: LotjaGi1g1v0652600 LjG1.1_chr1 121194993 121198816 +
1 domain prediction
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LotjaGi1g1v0652600.3
n.a. Trafficking protein particle complex subunit-like protein; TAIR: AT1G51160.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q557G3|TPPC1_DICDI Trafficking protein particle complex subunit 1; TrEMBL-Plants: tr|A0A151TJI3|A0A151TJI3_CAJCA Trafficking protein particle complex subunit 1; Found in the gene: LotjaGi1g1v0652600 LjG1.1_chr1 121194993 121198816 +
1 domain prediction
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LotjaGi3g1v0492900.1
n.a. Trafficking protein particle complex subunit 4; TAIR: AT5G02280.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q54UU1|TPPC4_DICDI Trafficking protein particle complex subunit 4; TrEMBL-Plants: tr|I3SNC8|I3SNC8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0492900 LjG1.1_chr3 91107733 91110014 +
1 domain prediction
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LotjaGi3g1v0492900.2
n.a. Trafficking protein particle complex subunit 4; TAIR: AT5G02280.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q2TBL9|TPPC4_BOVIN Trafficking protein particle complex subunit 4; TrEMBL-Plants: tr|I3SNC8|I3SNC8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0492900 LjG1.1_chr3 91108617 91110014 +
1 domain prediction
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LotjaGi3g1v0492900.3
n.a. Trafficking protein particle complex subunit 4; TAIR: AT5G02280.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q2TBL9|TPPC4_BOVIN Trafficking protein particle complex subunit 4; TrEMBL-Plants: tr|I3SNC8|I3SNC8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0492900 LjG1.1_chr3 91108792 91110014 +
1 domain prediction
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LotjaGi6g1v0042200.1
n.a. Trafficking protein particle complex subunit 4; TAIR: AT5G02280.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q54UU1|TPPC4_DICDI Trafficking protein particle complex subunit 4; TrEMBL-Plants: tr|G7L8Y7|G7L8Y7_MEDTR Trafficking protein particle complex subunit-like protein; Found in the gene: LotjaGi6g1v0042200 LjG1.1_chr6 8105970 8110824 -
1 domain prediction
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LotjaGi6g1v0042200.2
n.a. Trafficking protein particle complex subunit 4; TAIR: AT5G02280.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q54UU1|TPPC4_DICDI Trafficking protein particle complex subunit 4; TrEMBL-Plants: tr|G7L8Y7|G7L8Y7_MEDTR Trafficking protein particle complex subunit-like protein; Found in the gene: LotjaGi6g1v0042200 LjG1.1_chr6 8107919 8110645 -
1 domain prediction
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LotjaGi6g1v0042200.3
n.a. Trafficking protein particle complex subunit 4; TAIR: AT5G02280.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q2TBL9|TPPC4_BOVIN Trafficking protein particle complex subunit 4; TrEMBL-Plants: tr|I1LLI8|I1LLI8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0042200 LjG1.1_chr6 8108147 8109584 -
1 domain prediction
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