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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001048
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 71 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 0.033s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0040279.1
n.a. aspartokinase-homoserine dehydrogenase [Glycine max] gi|2970556|gb|AAC05983.1| chr0 13059748 13060059 +
3 domain predictions
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Lj0g3v0092639.1
n.a. PREDICTED: delta-1-pyrroline-5-carboxylate synthase-like [Glycine max] gi|356504258|ref|XP_003520914.1| chr0 38648065 38659007 +
4 domain predictions
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Lj0g3v0092639.2
n.a. PREDICTED: delta-1-pyrroline-5-carboxylate synthase-like [Glycine max] gi|356504258|ref|XP_003520914.1| chr0 38652802 38659007 +
4 domain predictions
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Lj0g3v0115579.1
n.a. delta-pyrroline-5-carboxylate synthetase [Lespedeza potaninii] gi|411117725|gb|AFW04294.1| chr0 50797459 50802386 -
3 domain predictions
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Lj0g3v0306219.1
n.a. delta-pyrroline-5-carboxylate synthetase [Glycine max] gi|351726518|ref|NP_001238153.1| chr0 159673949 159677289 +
4 domain predictions
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Lj1g3v1290360.1
n.a. PREDICTED: uridylate kinase-like [Glycine max] gi|356512819|ref|XP_003525113.1| chr1 15373422 15376135 -
4 domain predictions
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Lj1g3v1943870.1
n.a. PREDICTED: acetylglutamate kinase, chloroplastic-like [Glycine max] gi|356515515|ref|XP_003526445.1| chr1 23156844 23158207 -
4 domain predictions
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Lj1g3v3443810.1
n.a. PREDICTED: delta-1-pyrroline-5-carboxylate synthase-like [Glycine max] gi|356504258|ref|XP_003520914.1| chr1 39838647 39845547 -
4 domain predictions
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Lj1g3v3904250.1
n.a. PREDICTED: aspartokinase 1, chloroplastic-like [Glycine max] gi|356570251|ref|XP_003553303.1| chr1 45385385 45392373 +
4 domain predictions
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Lj2g3v1277250.1
n.a. Glutamate 5-kinase [Medicago truncatula] gi|357487315|ref|XP_003613945.1| chr2 20184112 20190861 -
4 domain predictions
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Lj2g3v1979710.1
n.a. PREDICTED: amino-acid acetyltransferase-like isoform X1 [Cicer arietinum] gi|502160640|ref|XP_004511825.1| chr2 28778791 28783061 +
4 domain predictions
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Lj2g3v2661830.1
n.a. PREDICTED: delta-1-pyrroline-5-carboxylate synthase-like [Glycine max] gi|356551630|ref|XP_003544177.1| chr2 35959079 35966685 -
3 domain predictions
 –
Lj2g3v2661830.3
n.a. PREDICTED: delta-1-pyrroline-5-carboxylate synthase-like [Glycine max] gi|356551630|ref|XP_003544177.1| chr2 35961743 35969791 -
3 domain predictions
 –
Lj4g3v0755920.1
n.a. PREDICTED: amino-acid acetyltransferase-like [Glycine max] gi|356565491|ref|XP_003550973.1| chr4 11796065 11801199 +
4 domain predictions
 –
Lj4g3v2578310.1
n.a. PREDICTED: bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic-like [Cicer arietinum] gi|502140918|ref|XP_004504375.1| chr4 34648119 34659945 -
4 domain predictions
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Lj5g3v0705390.1
n.a. PREDICTED: uridylate kinase-like [Cicer arietinum] gi|502122127|ref|XP_004497592.1| chr5 10225030 10229120 +
4 domain predictions
 –
Lj6g3v0292010.1
n.a. PREDICTED: bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic-like isoform X1 [Cicer arietinum] gi|502135208|ref|XP_004502255.1| chr6 3022054 3035259 +
4 domain predictions
 –
LotjaGi1g1v0086500.1
n.a. Glutamate 5-kinase; TAIR: AT3G55610.1 delta 1-pyrroline-5-carboxylate synthase 2; Swiss-Prot: sp|O04226|P5CS_ORYSJ Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr|I1JI26|I1JI26_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0086500 LjG1.1_chr1 12517133 12529112 +
2 domain predictions
 –
LotjaGi1g1v0086500.2
n.a. Glutamate 5-kinase; TAIR: AT3G55610.2 delta 1-pyrroline-5-carboxylate synthase 2; Swiss-Prot: sp|P32296|P5CS_VIGAC Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr|I1JI26|I1JI26_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0086500 LjG1.1_chr1 12517217 12525666 +
2 domain predictions
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LotjaGi1g1v0086500.3
n.a. Glutamate 5-kinase; TAIR: AT3G55610.2 delta 1-pyrroline-5-carboxylate synthase 2; Swiss-Prot: sp|P32296|P5CS_VIGAC Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr|I1JI26|I1JI26_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0086500 LjG1.1_chr1 12517381 12525123 +
2 domain predictions
 –
LotjaGi1g1v0086500.4
n.a. Glutamate 5-kinase; TAIR: AT3G55610.2 delta 1-pyrroline-5-carboxylate synthase 2; Swiss-Prot: sp|P32296|P5CS_VIGAC Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr|I1JI26|I1JI26_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0086500 LjG1.1_chr1 12517390 12525105 +
2 domain predictions
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LotjaGi1g1v0391300.1
n.a. Acetylglutamate kinase; TAIR: AT3G57560.1 N-acetyl-l-glutamate kinase; Swiss-Prot: sp|Q9SCL7|NAGK_ARATH Acetylglutamate kinase, chloroplastic; TrEMBL-Plants: tr|I1K925|I1K925_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0391300 LjG1.1_chr1 87532946 87533983 -
2 domain predictions
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LotjaGi1g1v0578400.1
n.a. Gamma-glutamyl phosphate reductase; TAIR: AT3G55610.1 delta 1-pyrroline-5-carboxylate synthase 2; Swiss-Prot: sp|O04226|P5CS_ORYSJ Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr|V7B6I7|V7B6I7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0578400 LjG1.1_chr1 111805332 111812550 -
2 domain predictions
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LotjaGi1g1v0578400.10
n.a. Gamma-glutamyl phosphate reductase; TAIR: AT3G55610.1 delta 1-pyrroline-5-carboxylate synthase 2; Swiss-Prot: sp|O04226|P5CS_ORYSJ Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr|A0A151THL8|A0A151THL8_CAJCA Delta-1-pyrroline-5-carboxylate synthetase; Found in the gene: LotjaGi1g1v0578400 LjG1.1_chr1 111805691 111811943 -
2 domain predictions
 –
LotjaGi1g1v0578400.11
n.a. Gamma-glutamyl phosphate reductase; TAIR: AT3G55610.1 delta 1-pyrroline-5-carboxylate synthase 2; Swiss-Prot: sp|O04226|P5CS_ORYSJ Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr|K7L1J4|K7L1J4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0578400 LjG1.1_chr1 111805691 111811943 -
2 domain predictions
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LotjaGi1g1v0578400.2
n.a. Glutamate 5-kinase; TAIR: AT2G39800.3 delta1-pyrroline-5-carboxylate synthase 1; Swiss-Prot: sp|O04226|P5CS_ORYSJ Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr|A0A151THL8|A0A151THL8_CAJCA Delta-1-pyrroline-5-carboxylate synthetase; Found in the gene: LotjaGi1g1v0578400 LjG1.1_chr1 111805338 111811508 -
2 domain predictions
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LotjaGi1g1v0578400.3
n.a. Gamma-glutamyl phosphate reductase; TAIR: AT3G55610.1 delta 1-pyrroline-5-carboxylate synthase 2; Swiss-Prot: sp|O04226|P5CS_ORYSJ Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr|K7L1J5|K7L1J5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0578400 LjG1.1_chr1 111805691 111810835 -
2 domain predictions
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LotjaGi1g1v0578400.4
n.a. Gamma-glutamyl phosphate reductase 1; TAIR: AT3G55610.2 delta 1-pyrroline-5-carboxylate synthase 2; Swiss-Prot: sp|O04226|P5CS_ORYSJ Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr|K7L1J4|K7L1J4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0578400 LjG1.1_chr1 111805691 111811691 -
2 domain predictions
 –
LotjaGi1g1v0578400.5
n.a. Gamma-glutamyl phosphate reductase; TAIR: AT3G55610.1 delta 1-pyrroline-5-carboxylate synthase 2; Swiss-Prot: sp|O04226|P5CS_ORYSJ Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr|A0A151THL8|A0A151THL8_CAJCA Delta-1-pyrroline-5-carboxylate synthetase; Found in the gene: LotjaGi1g1v0578400 LjG1.1_chr1 111805691 111811691 -
2 domain predictions
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LotjaGi1g1v0578400.6
n.a. Gamma-glutamyl phosphate reductase; TAIR: AT3G55610.1 delta 1-pyrroline-5-carboxylate synthase 2; Swiss-Prot: sp|O04226|P5CS_ORYSJ Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr|K7L1J3|K7L1J3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0578400 LjG1.1_chr1 111805691 111811691 -
2 domain predictions
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LotjaGi1g1v0578400.7
n.a. Gamma-glutamyl phosphate reductase; TAIR: AT3G55610.1 delta 1-pyrroline-5-carboxylate synthase 2; Swiss-Prot: sp|O04226|P5CS_ORYSJ Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr|K7L1J3|K7L1J3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0578400 LjG1.1_chr1 111805691 111811887 -
2 domain predictions
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LotjaGi1g1v0578400.8
n.a. Gamma-glutamyl phosphate reductase; TAIR: AT3G55610.1 delta 1-pyrroline-5-carboxylate synthase 2; Swiss-Prot: sp|O04226|P5CS_ORYSJ Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr|A0A151THL8|A0A151THL8_CAJCA Delta-1-pyrroline-5-carboxylate synthetase; Found in the gene: LotjaGi1g1v0578400 LjG1.1_chr1 111805691 111811887 -
2 domain predictions
 –
LotjaGi1g1v0578400.9
n.a. Gamma-glutamyl phosphate reductase; TAIR: AT3G55610.1 delta 1-pyrroline-5-carboxylate synthase 2; Swiss-Prot: sp|O04226|P5CS_ORYSJ Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr|K7L1J3|K7L1J3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0578400 LjG1.1_chr1 111805691 111811943 -
2 domain predictions
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LotjaGi1g1v0632300.1
n.a. Aspartokinase; TAIR: AT5G13280.1 aspartate kinase 1; Swiss-Prot: sp|Q9LYU8|AK1_ARATH Aspartokinase 1, chloroplastic; TrEMBL-Plants: tr|A0A0R0FVM5|A0A0R0FVM5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0632300 LjG1.1_chr1 118628778 118635639 +
2 domain predictions
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LotjaGi1g1v0632300.2
n.a. Aspartokinase; TAIR: AT5G13280.1 aspartate kinase 1; Swiss-Prot: sp|Q9LYU8|AK1_ARATH Aspartokinase 1, chloroplastic; TrEMBL-Plants: tr|A0A0R0FVM5|A0A0R0FVM5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0632300 LjG1.1_chr1 118629365 118635083 +
2 domain predictions
 –
LotjaGi2g1v0104400.1
n.a. Aspartokinase; TAIR: AT5G13280.1 aspartate kinase 1; Swiss-Prot: sp|Q9LYU8|AK1_ARATH Aspartokinase 1, chloroplastic; TrEMBL-Plants: tr|A0A0B2Q0S5|A0A0B2Q0S5_GLYSO Aspartokinase 1, chloroplastic; Found in the gene: LotjaGi2g1v0104400 LjG1.1_chr2 34937848 34945249 +
2 domain predictions
 –
LotjaGi2g1v0104400.2
n.a. Aspartokinase; TAIR: AT5G13280.1 aspartate kinase 1; Swiss-Prot: sp|Q9LYU8|AK1_ARATH Aspartokinase 1, chloroplastic; TrEMBL-Plants: tr|I1MNP0|I1MNP0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0104400 LjG1.1_chr2 34937933 34944745 +
2 domain predictions
 –
LotjaGi2g1v0104400.3
n.a. Aspartokinase; TAIR: AT5G13280.1 aspartate kinase 1; Swiss-Prot: sp|Q9LYU8|AK1_ARATH Aspartokinase 1, chloroplastic; TrEMBL-Plants: tr|I1MNP0|I1MNP0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0104400 LjG1.1_chr2 34938316 34944378 +
2 domain predictions
 –
LotjaGi2g1v0104400.4
n.a. Aspartokinase; TAIR: AT5G13280.1 aspartate kinase 1; Swiss-Prot: sp|Q9LYU8|AK1_ARATH Aspartokinase 1, chloroplastic; TrEMBL-Plants: tr|I1MNP0|I1MNP0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0104400 LjG1.1_chr2 34938320 34944378 +
2 domain predictions
 –
LotjaGi2g1v0104400.5
n.a. Aspartokinase; TAIR: AT5G13280.1 aspartate kinase 1; Swiss-Prot: sp|Q9LYU8|AK1_ARATH Aspartokinase 1, chloroplastic; TrEMBL-Plants: tr|A0A0B2Q0S5|A0A0B2Q0S5_GLYSO Aspartokinase 1, chloroplastic; Found in the gene: LotjaGi2g1v0104400 LjG1.1_chr2 34938348 34944378 +
2 domain predictions
 –
LotjaGi2g1v0104400.6
n.a. Aspartokinase; TAIR: AT5G13280.1 aspartate kinase 1; Swiss-Prot: sp|Q9LYU8|AK1_ARATH Aspartokinase 1, chloroplastic; TrEMBL-Plants: tr|I1MNP0|I1MNP0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0104400 LjG1.1_chr2 34938348 34944387 +
2 domain predictions
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LotjaGi2g1v0299100.1
n.a. Glutamate 5-kinase; TAIR: AT1G26640.1 Amino acid kinase family protein; Swiss-Prot: sp|O26153|IPK_METTH Isopentenyl phosphate kinase; TrEMBL-Plants: tr|A0A0B2P2T3|A0A0B2P2T3_GLYSO Uncharacterized protein; Found in the gene: LotjaGi2g1v0299100 LjG1.1_chr2 77343351 77353497 -
2 domain predictions
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LotjaGi2g1v0299100.2
n.a. Glutamate 5-kinase; TAIR: AT1G26640.1 Amino acid kinase family protein; Swiss-Prot: sp|O26153|IPK_METTH Isopentenyl phosphate kinase; TrEMBL-Plants: tr|A0A0B2P2T3|A0A0B2P2T3_GLYSO Uncharacterized protein; Found in the gene: LotjaGi2g1v0299100 LjG1.1_chr2 77346473 77353395 -
2 domain predictions
 –
LotjaGi2g1v0410400.1
n.a. Acetylglutamate kinase; TAIR: AT4G37670.2 N-acetyl-l-glutamate synthase 2; Swiss-Prot: sp|B5X4Z4|NAGS2_ARATH Probable amino-acid acetyltransferase NAGS2, chloroplastic; TrEMBL-Plants: tr|I1J9F4|I1J9F4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0410400 LjG1.1_chr2 90726355 90735164 -
2 domain predictions
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LotjaGi2g1v0410400.2
n.a. Acetylglutamate kinase; TAIR: AT4G37670.2 N-acetyl-l-glutamate synthase 2; Swiss-Prot: sp|B5X4Z4|NAGS2_ARATH Probable amino-acid acetyltransferase NAGS2, chloroplastic; TrEMBL-Plants: tr|I1J9F5|I1J9F5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0410400 LjG1.1_chr2 90726456 90731663 -
2 domain predictions
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LotjaGi3g1v0230400.1
n.a. Gamma-glutamyl phosphate reductase; TAIR: AT2G39800.1 delta1-pyrroline-5-carboxylate synthase 1; Swiss-Prot: sp|O04015|P5CS_ACTDE Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr|I1JLN5|I1JLN5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0230400 LjG1.1_chr3 35986856 35994418 -
2 domain predictions
 –
LotjaGi3g1v0230400.10
n.a. Gamma-glutamyl phosphate reductase; TAIR: AT2G39800.1 delta1-pyrroline-5-carboxylate synthase 1; Swiss-Prot: sp|O04015|P5CS_ACTDE Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr|I1JLN5|I1JLN5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0230400 LjG1.1_chr3 35987742 35993498 -
2 domain predictions
 –
LotjaGi3g1v0230400.11
n.a. Gamma-glutamyl phosphate reductase; TAIR: AT2G39800.1 delta1-pyrroline-5-carboxylate synthase 1; Swiss-Prot: sp|O04015|P5CS_ACTDE Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr|I1JLN5|I1JLN5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0230400 LjG1.1_chr3 35987742 35993498 -
2 domain predictions
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LotjaGi3g1v0230400.2
n.a. Gamma-glutamyl phosphate reductase; TAIR: AT2G39800.1 delta1-pyrroline-5-carboxylate synthase 1; Swiss-Prot: sp|O04226|P5CS_ORYSJ Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr|I1JLN5|I1JLN5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0230400 LjG1.1_chr3 35986856 35998635 -
2 domain predictions
 –
LotjaGi3g1v0230400.3
n.a. Gamma-glutamyl phosphate reductase; TAIR: AT2G39800.1 delta1-pyrroline-5-carboxylate synthase 1; Swiss-Prot: sp|O04226|P5CS_ORYSJ Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr|I1JLN5|I1JLN5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0230400 LjG1.1_chr3 35986856 35998781 -
2 domain predictions
 –