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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR038920
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 12 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.015s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0318900.1
n.a. BTB/POZ domain-containing protein; TAIR: AT2G13690.1 PRLI-interacting factor; Swiss-Prot: sp|Q9SKH2|Y2369_ARATH BTB/POZ domain-containing protein At2g13690; TrEMBL-Plants: tr|G7JBJ6|G7JBJ6_MEDTR BTB/POZ domain plant protein; Found in the gene: LotjaGi1g1v0318900 LjG1.1_chr1 76796723 76799683 -
2 domain predictions
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LotjaGi1g1v0737500.1
n.a. BTB/POZ domain-containing protein; TAIR: AT3G05675.1 BTB/POZ domain-containing protein; Swiss-Prot: sp|Q8RX01|Y3567_ARATH BTB/POZ domain-containing protein At3g05675; TrEMBL-Plants: tr|I1JQ93|I1JQ93_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0737500 LjG1.1_chr1 131197314 131199628 -
2 domain predictions
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LotjaGi2g1v0366000.1
n.a. BTB/POZ domain-containing protein; TAIR: AT5G60050.1 BTB/POZ domain-containing protein; Swiss-Prot: sp|Q9LVG9|Y5600_ARATH BTB/POZ domain-containing protein At5g60050; TrEMBL-Plants: tr|A0A0L9V6Q7|A0A0L9V6Q7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0366000 LjG1.1_chr2 86354583 86358634 +
2 domain predictions
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LotjaGi2g1v0395700.3
n.a. BTB/POZ domain-containing protein; TAIR: AT3G50780.1 BTB/POZ domain protein; Swiss-Prot: sp|Q9SVM0|Y3078_ARATH BTB/POZ domain-containing protein At3g50780; TrEMBL-Plants: tr|V7CHN2|V7CHN2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0395700 LjG1.1_chr2 89317847 89320910 -
2 domain predictions
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LotjaGi3g1v0507900.1
n.a. BTB/POZ domain-containing protein; TAIR: AT1G63850.1 BTB/POZ domain-containing protein; Swiss-Prot: sp|Q9CAJ9|Y1385_ARATH BTB/POZ domain-containing protein At1g63850; TrEMBL-Plants: tr|I1LJD8|I1LJD8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0507900 LjG1.1_chr3 92490995 92495102 +
2 domain predictions
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LotjaGi4g1v0113900.1
n.a. BTB/POZ domain-containing protein; TAIR: AT3G50780.1 BTB/POZ domain protein; Swiss-Prot: sp|Q9SVM0|Y3078_ARATH BTB/POZ domain-containing protein At3g50780; TrEMBL-Plants: tr|A0A072TUF3|A0A072TUF3_MEDTR BTB/POZ domain plant protein; Found in the gene: LotjaGi4g1v0113900 LjG1.1_chr4 16427027 16431578 +
2 domain predictions
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LotjaGi4g1v0113900.2
n.a. BTB/POZ domain-containing protein; TAIR: AT3G50780.1 BTB/POZ domain protein; Swiss-Prot: sp|Q9SVM0|Y3078_ARATH BTB/POZ domain-containing protein At3g50780; TrEMBL-Plants: tr|A0A072TUF3|A0A072TUF3_MEDTR BTB/POZ domain plant protein; Found in the gene: LotjaGi4g1v0113900 LjG1.1_chr4 16428000 16430996 +
2 domain predictions
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LotjaGi4g1v0429200.1
n.a. BTB/POZ domain-containing protein; TAIR: AT1G63850.1 BTB/POZ domain-containing protein; Swiss-Prot: sp|Q9CAJ9|Y1385_ARATH BTB/POZ domain-containing protein At1g63850; TrEMBL-Plants: tr|A0A151TF23|A0A151TF23_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0429200 LjG1.1_chr4 80338541 80342781 +
2 domain predictions
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LotjaGi4g1v0429200.2
n.a. BTB/POZ domain-containing protein; TAIR: AT1G63850.1 BTB/POZ domain-containing protein; Swiss-Prot: sp|Q9CAJ9|Y1385_ARATH BTB/POZ domain-containing protein At1g63850; TrEMBL-Plants: tr|A0A151TF23|A0A151TF23_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0429200 LjG1.1_chr4 80338870 80340995 +
2 domain predictions
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LotjaGi4g1v0429200.3
n.a. BTB/POZ domain-containing protein; TAIR: AT1G63850.1 BTB/POZ domain-containing protein; Swiss-Prot: sp|Q9CAJ9|Y1385_ARATH BTB/POZ domain-containing protein At1g63850; TrEMBL-Plants: tr|A0A151TF23|A0A151TF23_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0429200 LjG1.1_chr4 80338874 80340995 +
2 domain predictions
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LotjaGi6g1v0352100.1
n.a. BTB/POZ domain protein; TAIR: AT5G64230.1 1,8-cineole synthase; Swiss-Prot: sp|A5DSS4|LKHA4_LODEL Leukotriene A-4 hydrolase homolog; TrEMBL-Plants: tr|G7INX2|G7INX2_MEDTR Transmembrane protein, putative; Found in the gene: LotjaGi6g1v0352100 LjG1.1_chr6 66424586 66443374 -
2 domain predictions
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LotjaGi6g1v0352100.3
n.a. BTB/POZ domain protein; TAIR: AT5G64230.1 1,8-cineole synthase; Swiss-Prot: sp|A5DSS4|LKHA4_LODEL Leukotriene A-4 hydrolase homolog; TrEMBL-Plants: tr|G7INX2|G7INX2_MEDTR Transmembrane protein, putative; Found in the gene: LotjaGi6g1v0352100 LjG1.1_chr6 66437468 66443203 -
2 domain predictions
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