Domain Predictions — View

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G3DSA:2.20.28.140

Source: Gene3D

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 7

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi4g1v0013400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tyrosyl-DNA phosphodiesterase 2; TAIR: AT1G11800.1 endonuclease/exonuclease/phosphatase family protein; Swiss-Prot: sp\|A5D8M0\|TYDP2_XENLA Tyrosyl-DNA phosphodiesterase 2; TrEMBL-Plants: tr\|I3S456\|I3S456_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0013400	Domains G3DSA:2.20.28.140 G3DSA:3.60.10.10 IPR001876 IPR005135 IPR036443 IPR036691 PF03372 PS01358 PTHR15822 PTHR15822:SF17 SM00547 SSF56219 SSF90209 cd09080 mobidb-lite	15
LotjaGi4g1v0382500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor 1-alpha, putative; TAIR: AT5G10630.3 Translation elongation factor EF1A/initiation factor IF2gamma family protein; Swiss-Prot: sp\|Q5R6Y0\|HBS1L_PONAB HBS1-like protein; TrEMBL-Plants: tr\|K7KQL0\|K7KQL0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0382500	Domains G3DSA:2.20.28.140 G3DSA:2.40.30.10 G3DSA:3.40.50.300 IPR000795 IPR001876 IPR004160 IPR009000 IPR009001 IPR027417 IPR036443 PF00009 PF03143 PR00315 PS01358 PS50199 PS51722 PTHR23115 PTHR23115:SF244 SM00547 SSF50447 SSF50465 SSF52540 SSF90209 cd01883 cd04093 cd16267 mobidb-lite	27
LotjaGi4g1v0382500.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor 1-alpha, putative; TAIR: AT5G10630.1 Translation elongation factor EF1A/initiation factor IF2gamma family protein; Swiss-Prot: sp\|Q5R6Y0\|HBS1L_PONAB HBS1-like protein; TrEMBL-Plants: tr\|K7KQL1\|K7KQL1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0382500	Domains G3DSA:2.20.28.140 G3DSA:2.40.30.10 G3DSA:3.40.50.300 IPR000795 IPR001876 IPR004160 IPR009000 IPR009001 IPR027417 IPR036443 PF00009 PF03143 PR00315 PS01358 PS50199 PS51722 PTHR23115 PTHR23115:SF244 SM00547 SSF50447 SSF50465 SSF52540 SSF90209 cd01883 cd04093 mobidb-lite	26
LotjaGi4g1v0382500.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor 1-alpha, putative; TAIR: AT5G10630.3 Translation elongation factor EF1A/initiation factor IF2gamma family protein; Swiss-Prot: sp\|Q5R6Y0\|HBS1L_PONAB HBS1-like protein; TrEMBL-Plants: tr\|K7KQL0\|K7KQL0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0382500	Domains G3DSA:2.20.28.140 G3DSA:2.40.30.10 G3DSA:3.40.50.300 IPR000795 IPR001876 IPR004160 IPR009000 IPR009001 IPR027417 IPR036443 PF00009 PF03143 PR00315 PS01358 PS50199 PS51722 PTHR23115 PTHR23115:SF244 SM00547 SSF50447 SSF50465 SSF52540 SSF90209 cd01883 cd04093 cd16267 mobidb-lite	27
LotjaGi4g1v0382500.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor 1-alpha, putative; TAIR: AT5G10630.1 Translation elongation factor EF1A/initiation factor IF2gamma family protein; Swiss-Prot: sp\|Q5R6Y0\|HBS1L_PONAB HBS1-like protein; TrEMBL-Plants: tr\|K7KQL1\|K7KQL1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0382500	Domains G3DSA:2.20.28.140 G3DSA:2.40.30.10 G3DSA:3.40.50.300 IPR000795 IPR001876 IPR004160 IPR009000 IPR009001 IPR027417 IPR036443 PF00009 PF03143 PR00315 PS01358 PS50199 PS51722 PTHR23115 PTHR23115:SF244 SM00547 SSF50447 SSF50465 SSF52540 SSF90209 cd01883 cd04093 mobidb-lite	26
LotjaGi6g1v0144400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc ion-binding protein; TAIR: AT1G55915.1 zinc ion binding protein; Swiss-Prot: sp\|P38838\|WSS1_YEAST DNA-dependent metalloprotease WSS1; TrEMBL-Plants: tr\|A0A072V797\|A0A072V797_MEDTR Zinc ion-binding protein; Found in the gene: LotjaGi6g1v0144400	Domains G3DSA:2.20.28.140 IPR001876 IPR013536 IPR036443 PF08325 PS01358 PS50199 PS51397 PTHR46622 SM00547 SSF90209 cd07344 mobidb-lite	13
LotjaGi6g1v0144500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger protein; TAIR: AT1G55915.1 zinc ion binding protein; Swiss-Prot: sp\|P38838\|WSS1_YEAST DNA-dependent metalloprotease WSS1; TrEMBL-Plants: tr\|A0A072UX78\|A0A072UX78_MEDTR Zinc ion-binding protein; Found in the gene: LotjaGi6g1v0144500_LC	Domains G3DSA:2.20.28.140 IPR001876 IPR036443 PS01358 PS50199 PTHR46622 PTHR46622:SF2 SM00547 SSF90209	9

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
SSF90209	SUPERFAMILY	1	14.29