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IPR005578

Source: InterPro

Description

IPR005578 is a Yif1 family.

<p>Yif1 (Yip1 interacting factor) is an integral membrane protein required for membrane fusion of ER derived vesicles [[cite:PUB00045173]]. It also plays a role in the biogenesis of ER derived COPII transport vesicles [[cite:PUB00033378]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005789
Cellular component Endoplasmic reticulum membrane The lipid bilayer surrounding the endoplasmic reticulum.
Subterm of
Part of
GO:0006888
Biological process ER to Golgi vesicle-mediated transport The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.
Subterm of

Associated Lotus transcripts 10

Transcript Name Description Predicted domains Domain count
Lj0g3v0102499.1
– PREDICTED: protein YIF1B-like [Cicer arietinum] gi|502148747|ref|XP_004507253.1|
Domains
5
Lj0g3v0102499.2
– PREDICTED: protein YIF1B-like [Cicer arietinum] gi|502148747|ref|XP_004507253.1|
Domains
8
Lj1g3v3103940.1
– Protein YIF1B-B [Medicago truncatula] gi|357502653|ref|XP_003621615.1|
Domains
10
Lj1g3v3103940.2
– Protein YIF1B-B [Medicago truncatula] gi|357502653|ref|XP_003621615.1|
Domains
9
LotjaGi1g1v0523900.1
– Integral membrane HRF1 family protein; TAIR: AT1G30890.1 Integral membrane HRF1 family protein; Swiss-Prot: sp|Q6GN58|YF1BA_XENLA Protein YIF1B-A; TrEMBL-Plants: tr|G7KSU9|G7KSU9_MEDTR Integral membrane HRF1 family protein; Found in the gene: LotjaGi1g1v0523900
Domains
9
LotjaGi1g1v0523900.2
– Integral membrane HRF1 family protein; TAIR: AT1G30890.1 Integral membrane HRF1 family protein; Swiss-Prot: sp|Q6GN58|YF1BA_XENLA Protein YIF1B-A; TrEMBL-Plants: tr|G7KSU9|G7KSU9_MEDTR Integral membrane HRF1 family protein; Found in the gene: LotjaGi1g1v0523900
Domains
9
LotjaGi2g1v0059400.1
– Integral membrane HRF1 family protein; TAIR: AT1G30890.1 Integral membrane HRF1 family protein; Swiss-Prot: sp|Q6GN58|YF1BA_XENLA Protein YIF1B-A; TrEMBL-Plants: tr|I3SF42|I3SF42_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0059400
Domains
8
LotjaGi2g1v0059400.2
– Integral membrane HRF1 family protein; TAIR: AT1G30890.1 Integral membrane HRF1 family protein; Swiss-Prot: sp|Q6GN58|YF1BA_XENLA Protein YIF1B-A; TrEMBL-Plants: tr|I3SF42|I3SF42_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0059400
Domains
8
LotjaGi2g1v0059400.3
– Integral membrane HRF1 family protein; TAIR: AT1G30890.1 Integral membrane HRF1 family protein; Swiss-Prot: sp|Q6GN58|YF1BA_XENLA Protein YIF1B-A; TrEMBL-Plants: tr|I3SF42|I3SF42_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0059400
Domains
8
LotjaGi2g1v0059400.4
– Protein YIF1B; TAIR: AT3G59500.1 Integral membrane HRF1 family protein; Swiss-Prot: sp|Q4FZQ0|YF1BB_XENLA Protein YIF1B-B; TrEMBL-Plants: tr|I3SF42|I3SF42_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0059400
Domains
8

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
TRANSMEMBRANE Phobius 1 10.00