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IPR007146 is a Sas10/Utp3/C1D.
<p>This entry represents Something about silencing protein 10 (SAS10, also known as UTP3) and U3 small nucleolar ribonucleoprotein protein LCP5 which are components of the U3 ribonucleoprotein complex [[cite:PUB00008496]]. It also includes Nuclear nucleic acid-binding protein C1D from Mus musculus (Mouse), which plays a role in the recruitment of the RNA exosome complex to pre-rRNA to mediate the 3'-5' end processing of the 5.8S rRNA [[cite:PUB00100303]], Protein THALLO from Arabidopsis thaliana, essential during embryogenesis [[cite:PUB00085159], [cite:PUB00100304]] and the human protein Neuroguidin, an initiation factor 4E (eIF4E)-binding protein [[cite:PUB00009814]].</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Nuclear nucleic acid-binding protein C1D [Medicago truncatula] gi|357466007|ref|XP_003603288.1| | 6 | ||
| – | PREDICTED: neuroguidin-like [Glycine max] gi|356510136|ref|XP_003523796.1| | 5 | ||
| – | PREDICTED: something about silencing protein 10-like isoform X3 [Cicer arietinum] gi|502142960|ref|XP_004505165.1| | 7 | ||
| – | Nuclear nucleic acid-binding protein C1D; TAIR: AT5G25080.1 Sas10/Utp3/C1D family; Swiss-Prot: sp|Q3KPR1|C1D_XENLA Nuclear nucleic acid-binding protein C1D; TrEMBL-Plants: tr|I1K8L9|I1K8L9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0376600 | 6 | ||
| – | Neuroguidin; TAIR: AT1G07840.1 Sas10/Utp3/C1D family; Swiss-Prot: sp|Q28IV8|NGDN_XENTR Neuroguidin; TrEMBL-Plants: tr|I1K9T1|I1K9T1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0597600 | 6 | ||
| – | Neuroguidin; TAIR: AT1G07840.1 Sas10/Utp3/C1D family; Swiss-Prot: sp|Q28IV8|NGDN_XENTR Neuroguidin; TrEMBL-Plants: tr|I1K9T1|I1K9T1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0597600 | 6 | ||
| – | Something about silencing protein 10; TAIR: AT2G43650.1 Sas10/U3 ribonucleoprotein (Utp) family protein; Swiss-Prot: sp|Q12136|SAS10_YEAST Something about silencing protein 10; TrEMBL-Plants: tr|A0A151S4Q1|A0A151S4Q1_CAJCA Something about silencing protein 10; Found in the gene: LotjaGi1g1v0640600 | 7 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 14.29 |