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IPR011498 is a Kelch repeat type 2.
<p>Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [[cite:PUB00000885]]. This sequence motif represents one β-sheet blade, and several of these repeats can associate to form a β-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein (also known as ring canal kelch protein), creating a 6-bladed β-propeller. The motif is also found in mouse protein MIPP [[cite:PUB00000885]] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha-and beta-scruin [[cite:PUB00003094], [cite:PUB00003079]], and in galactose oxidase from the fungus Dactylium dendroides [[cite:PUB00003318], [cite:PUB00004093]]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded antiparallel β-sheet motif that forms the repeat unit in a super-barrel structural fold [[cite:PUB00003324]].</p> <p>The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila [[cite:PUB00003094]]. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase [[cite:PUB00003318]].</p> <p>This entry represents a type of kelch sequence motif that comprises one β-sheet blade.</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | PREDICTED: serine/threonine-protein phosphatase BSL2-like [Glycine max] gi|356550064|ref|XP_003543410.1| | 9 | ||
– | PREDICTED: serine/threonine-protein phosphatase BSL2-like [Glycine max] gi|356550064|ref|XP_003543410.1| | 9 | ||
– | BRI1 suppressor 1 (BSU1)-like 2 isoform 1 [Theobroma cacao] gi|508786020|gb|EOY33276.1| | 21 | ||
– | BRI1 suppressor 1 (BSU1)-like 2 isoform 1 [Theobroma cacao] gi|508786020|gb|EOY33276.1| | 21 | ||
– | PREDICTED: F-box/kelch-repeat protein At1g67480-like [Glycine max] gi|356525146|ref|XP_003531188.1| | 14 | ||
– | Circadian clock-associated FKF1 [Glycine max] gi|351727583|ref|NP_001235886.1| | 25 | ||
– | Clock-associated PAS protein ZEITLUPE 2 [Glycine max] gi|351727148|ref|NP_001235871.1| | 9 | ||
– | PREDICTED: adagio protein 1-like [Cicer arietinum] gi|502085564|ref|XP_004487946.1| | 21 | ||
– | 12 | |||
– | Serine/threonine-protein phosphatase; TAIR: AT2G27210.1 BRI1 suppressor 1 (BSU1)-like 3; Swiss-Prot: sp|Q9SHS7|BSL3_ARATH Serine/threonine-protein phosphatase BSL3; TrEMBL-Plants: tr|A0A0R0H3J2|A0A0R0H3J2_SOYBN Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0183500 | 22 | ||
– | Serine/threonine-protein phosphatase; TAIR: AT1G08420.1 BRI1 suppressor 1 (BSU1)-like 2; Swiss-Prot: sp|Q9SJF0|BSL2_ARATH Serine/threonine-protein phosphatase BSL2; TrEMBL-Plants: tr|A0A061GVT6|A0A061GVT6_THECC Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0183500 | 21 | ||
– | Serine/threonine-protein phosphatase; TAIR: AT1G08420.1 BRI1 suppressor 1 (BSU1)-like 2; Swiss-Prot: sp|Q9SJF0|BSL2_ARATH Serine/threonine-protein phosphatase BSL2; TrEMBL-Plants: tr|A0A0R0H3J2|A0A0R0H3J2_SOYBN Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0183500 | 22 | ||
– | Serine/threonine-protein phosphatase; TAIR: AT2G27210.1 BRI1 suppressor 1 (BSU1)-like 3; Swiss-Prot: sp|Q9SHS7|BSL3_ARATH Serine/threonine-protein phosphatase BSL3; TrEMBL-Plants: tr|A0A0R0H3J2|A0A0R0H3J2_SOYBN Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0183500 | 20 | ||
– | Serine/threonine-protein phosphatase; TAIR: AT1G08420.1 BRI1 suppressor 1 (BSU1)-like 2; Swiss-Prot: sp|Q9SJF0|BSL2_ARATH Serine/threonine-protein phosphatase BSL2; TrEMBL-Plants: tr|A0A0R0HHJ5|A0A0R0HHJ5_SOYBN Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0183500 | 22 | ||
– | Serine/threonine-protein phosphatase; TAIR: AT1G08420.1 BRI1 suppressor 1 (BSU1)-like 2; Swiss-Prot: sp|Q9SJF0|BSL2_ARATH Serine/threonine-protein phosphatase BSL2; TrEMBL-Plants: tr|A0A0R0H3J2|A0A0R0H3J2_SOYBN Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0183500 | 20 | ||
– | Serine/threonine-protein phosphatase; TAIR: AT2G27210.1 BRI1 suppressor 1 (BSU1)-like 3; Swiss-Prot: sp|Q9SHS7|BSL3_ARATH Serine/threonine-protein phosphatase BSL3; TrEMBL-Plants: tr|A0A0B0P825|A0A0B0P825_GOSAR Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0471100 | 22 | ||
– | Serine/threonine-protein phosphatase; TAIR: AT1G08420.1 BRI1 suppressor 1 (BSU1)-like 2; Swiss-Prot: sp|Q9SJF0|BSL2_ARATH Serine/threonine-protein phosphatase BSL2; TrEMBL-Plants: tr|A0A0D2Q811|A0A0D2Q811_GOSRA Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0471100 | 20 | ||
– | Serine/threonine-protein phosphatase; TAIR: AT2G27210.1 BRI1 suppressor 1 (BSU1)-like 3; Swiss-Prot: sp|Q9SHS7|BSL3_ARATH Serine/threonine-protein phosphatase BSL3; TrEMBL-Plants: tr|A0A0B0P825|A0A0B0P825_GOSAR Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0471100 | 22 | ||
– | Serine/threonine-protein phosphatase; TAIR: AT2G27210.1 BRI1 suppressor 1 (BSU1)-like 3; Swiss-Prot: sp|Q9SHS7|BSL3_ARATH Serine/threonine-protein phosphatase BSL3; TrEMBL-Plants: tr|A0A0B0P825|A0A0B0P825_GOSAR Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0471100 | 22 | ||
– | F-box/kelch-repeat protein; TAIR: AT1G67480.1 Galactose oxidase/kelch repeat superfamily protein; Swiss-Prot: sp|Q9CAG8|FBK28_ARATH F-box/kelch-repeat protein At1g67480; TrEMBL-Plants: tr|I1KS09|I1KS09_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0364300 | 15 | ||
– | F-box/kelch-repeat protein; TAIR: AT1G67480.1 Galactose oxidase/kelch repeat superfamily protein; Swiss-Prot: sp|Q9CAG8|FBK28_ARATH F-box/kelch-repeat protein At1g67480; TrEMBL-Plants: tr|I1KS09|I1KS09_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0364300 | 15 | ||
– | Flavin-binding kelch domain F box protein; TAIR: AT1G68050.1 flavin-binding, kelch repeat, f box 1; Swiss-Prot: sp|Q9C9W9|ADO3_ARATH Adagio protein 3; TrEMBL-Plants: tr|V7CQN8|V7CQN8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0457700 | 26 | ||
– | Kelch repeat-containing protein 1; TAIR: AT5G57360.1 Galactose oxidase/kelch repeat superfamily protein; Swiss-Prot: sp|Q94BT6|ADO1_ARATH Adagio protein 1; TrEMBL-Plants: tr|A0A126WYA5|A0A126WYA5_ASTME Putative LOV domain-containing protein; Found in the gene: LotjaGi6g1v0240900 | 23 | ||
– | Kelch repeat-containing protein 1; TAIR: AT5G57360.1 Galactose oxidase/kelch repeat superfamily protein; Swiss-Prot: sp|Q94BT6|ADO1_ARATH Adagio protein 1; TrEMBL-Plants: tr|A0A126WYA5|A0A126WYA5_ASTME Putative LOV domain-containing protein; Found in the gene: LotjaGi6g1v0240900 | 18 | ||
– | Kelch repeat-containing protein 1; TAIR: AT5G57360.1 Galactose oxidase/kelch repeat superfamily protein; Swiss-Prot: sp|Q94BT6|ADO1_ARATH Adagio protein 1; TrEMBL-Plants: tr|A0A126WYA5|A0A126WYA5_ASTME Putative LOV domain-containing protein; Found in the gene: LotjaGi6g1v0240900 | 18 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
SSF81383 | SUPERFAMILY | 1 | 4.00 |