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IPR011498

Description

IPR011498 is a Kelch repeat type 2.

<p>Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [[cite:PUB00000885]]. This sequence motif represents one β-sheet blade, and several of these repeats can associate to form a β-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein (also known as ring canal kelch protein), creating a 6-bladed β-propeller. The motif is also found in mouse protein MIPP [[cite:PUB00000885]] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha-and beta-scruin [[cite:PUB00003094], [cite:PUB00003079]], and in galactose oxidase from the fungus Dactylium dendroides [[cite:PUB00003318], [cite:PUB00004093]]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded antiparallel β-sheet motif that forms the repeat unit in a super-barrel structural fold [[cite:PUB00003324]].</p> <p>The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila [[cite:PUB00003094]]. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase [[cite:PUB00003318]].</p> <p>This entry represents a type of kelch sequence motif that comprises one β-sheet blade.</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

Associated Lotus transcripts 25

Transcript Name Description Predicted domains Domain count
PREDICTED: serine/threonine-protein phosphatase BSL2-like [Glycine max] gi|356550064|ref|XP_003543410.1| 9
PREDICTED: serine/threonine-protein phosphatase BSL2-like [Glycine max] gi|356550064|ref|XP_003543410.1| 9
BRI1 suppressor 1 (BSU1)-like 2 isoform 1 [Theobroma cacao] gi|508786020|gb|EOY33276.1| 21
BRI1 suppressor 1 (BSU1)-like 2 isoform 1 [Theobroma cacao] gi|508786020|gb|EOY33276.1| 21
PREDICTED: F-box/kelch-repeat protein At1g67480-like [Glycine max] gi|356525146|ref|XP_003531188.1| 14
Circadian clock-associated FKF1 [Glycine max] gi|351727583|ref|NP_001235886.1| 25
Clock-associated PAS protein ZEITLUPE 2 [Glycine max] gi|351727148|ref|NP_001235871.1| 9
PREDICTED: adagio protein 1-like [Cicer arietinum] gi|502085564|ref|XP_004487946.1| 21
12
Serine/threonine-protein phosphatase; TAIR: AT2G27210.1 BRI1 suppressor 1 (BSU1)-like 3; Swiss-Prot: sp|Q9SHS7|BSL3_ARATH Serine/threonine-protein phosphatase BSL3; TrEMBL-Plants: tr|A0A0R0H3J2|A0A0R0H3J2_SOYBN Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0183500 22
Serine/threonine-protein phosphatase; TAIR: AT1G08420.1 BRI1 suppressor 1 (BSU1)-like 2; Swiss-Prot: sp|Q9SJF0|BSL2_ARATH Serine/threonine-protein phosphatase BSL2; TrEMBL-Plants: tr|A0A061GVT6|A0A061GVT6_THECC Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0183500 21
Serine/threonine-protein phosphatase; TAIR: AT1G08420.1 BRI1 suppressor 1 (BSU1)-like 2; Swiss-Prot: sp|Q9SJF0|BSL2_ARATH Serine/threonine-protein phosphatase BSL2; TrEMBL-Plants: tr|A0A0R0H3J2|A0A0R0H3J2_SOYBN Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0183500 22
Serine/threonine-protein phosphatase; TAIR: AT2G27210.1 BRI1 suppressor 1 (BSU1)-like 3; Swiss-Prot: sp|Q9SHS7|BSL3_ARATH Serine/threonine-protein phosphatase BSL3; TrEMBL-Plants: tr|A0A0R0H3J2|A0A0R0H3J2_SOYBN Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0183500 20
Serine/threonine-protein phosphatase; TAIR: AT1G08420.1 BRI1 suppressor 1 (BSU1)-like 2; Swiss-Prot: sp|Q9SJF0|BSL2_ARATH Serine/threonine-protein phosphatase BSL2; TrEMBL-Plants: tr|A0A0R0HHJ5|A0A0R0HHJ5_SOYBN Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0183500 22
Serine/threonine-protein phosphatase; TAIR: AT1G08420.1 BRI1 suppressor 1 (BSU1)-like 2; Swiss-Prot: sp|Q9SJF0|BSL2_ARATH Serine/threonine-protein phosphatase BSL2; TrEMBL-Plants: tr|A0A0R0H3J2|A0A0R0H3J2_SOYBN Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0183500 20
Serine/threonine-protein phosphatase; TAIR: AT2G27210.1 BRI1 suppressor 1 (BSU1)-like 3; Swiss-Prot: sp|Q9SHS7|BSL3_ARATH Serine/threonine-protein phosphatase BSL3; TrEMBL-Plants: tr|A0A0B0P825|A0A0B0P825_GOSAR Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0471100 22
Serine/threonine-protein phosphatase; TAIR: AT1G08420.1 BRI1 suppressor 1 (BSU1)-like 2; Swiss-Prot: sp|Q9SJF0|BSL2_ARATH Serine/threonine-protein phosphatase BSL2; TrEMBL-Plants: tr|A0A0D2Q811|A0A0D2Q811_GOSRA Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0471100 20
Serine/threonine-protein phosphatase; TAIR: AT2G27210.1 BRI1 suppressor 1 (BSU1)-like 3; Swiss-Prot: sp|Q9SHS7|BSL3_ARATH Serine/threonine-protein phosphatase BSL3; TrEMBL-Plants: tr|A0A0B0P825|A0A0B0P825_GOSAR Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0471100 22
Serine/threonine-protein phosphatase; TAIR: AT2G27210.1 BRI1 suppressor 1 (BSU1)-like 3; Swiss-Prot: sp|Q9SHS7|BSL3_ARATH Serine/threonine-protein phosphatase BSL3; TrEMBL-Plants: tr|A0A0B0P825|A0A0B0P825_GOSAR Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0471100 22
F-box/kelch-repeat protein; TAIR: AT1G67480.1 Galactose oxidase/kelch repeat superfamily protein; Swiss-Prot: sp|Q9CAG8|FBK28_ARATH F-box/kelch-repeat protein At1g67480; TrEMBL-Plants: tr|I1KS09|I1KS09_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0364300 15
F-box/kelch-repeat protein; TAIR: AT1G67480.1 Galactose oxidase/kelch repeat superfamily protein; Swiss-Prot: sp|Q9CAG8|FBK28_ARATH F-box/kelch-repeat protein At1g67480; TrEMBL-Plants: tr|I1KS09|I1KS09_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0364300 15
Flavin-binding kelch domain F box protein; TAIR: AT1G68050.1 flavin-binding, kelch repeat, f box 1; Swiss-Prot: sp|Q9C9W9|ADO3_ARATH Adagio protein 3; TrEMBL-Plants: tr|V7CQN8|V7CQN8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0457700 26
Kelch repeat-containing protein 1; TAIR: AT5G57360.1 Galactose oxidase/kelch repeat superfamily protein; Swiss-Prot: sp|Q94BT6|ADO1_ARATH Adagio protein 1; TrEMBL-Plants: tr|A0A126WYA5|A0A126WYA5_ASTME Putative LOV domain-containing protein; Found in the gene: LotjaGi6g1v0240900 23
Kelch repeat-containing protein 1; TAIR: AT5G57360.1 Galactose oxidase/kelch repeat superfamily protein; Swiss-Prot: sp|Q94BT6|ADO1_ARATH Adagio protein 1; TrEMBL-Plants: tr|A0A126WYA5|A0A126WYA5_ASTME Putative LOV domain-containing protein; Found in the gene: LotjaGi6g1v0240900 18
Kelch repeat-containing protein 1; TAIR: AT5G57360.1 Galactose oxidase/kelch repeat superfamily protein; Swiss-Prot: sp|Q94BT6|ADO1_ARATH Adagio protein 1; TrEMBL-Plants: tr|A0A126WYA5|A0A126WYA5_ASTME Putative LOV domain-containing protein; Found in the gene: LotjaGi6g1v0240900 18

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
SSF81383 SUPERFAMILY 1 4.00