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IPR011576

Description

IPR011576 is a Pyridoxamine 5'-phosphate oxidase, putative.

<p>Pyridoxamine 5'-phosphate oxidase (PNPOx; [ec:1.4.3.5]) is a FMN flavoprotein that catalyses the oxidation of pyridoxamine-5-P (PMP) and pyridoxine-5-P (PNP) to pyridoxal-5-P (PLP). This reaction serves as the terminal step in the de novo biosynthesis of PLP in Escherichia coli and as a part of the salvage pathway of this coenzyme in both E. coli and mammalian cells [[cite:PUB00016343], [cite:PUB00016342]]. The binding sites for FMN and for substrate have been highly conserved throughout evolution.</p> <p>This entry represents a domain with putative PNPOx (Pyridoxamine 5'-phosphate oxidase) function. The domain was initially predicted to encode pyridoxamine 5'-phosphate oxidase, based on sequence similarity. However, there is no experimental data to validate the predicted activity and purified proteins, such as [swissprot:Q06199] and its paralogs, do not possess this activity, nor do they bind to flavin mononucleotide (FMN). To date, the only time functional oxidase activity has been experimentally demonstrated is when the sequences contain both [pfam:PF01243] and [pfam:PF10590]. Moreover, some of the family members that contain both domains have been shown to be involved in phenazine biosynthesis. While some molecular function has been experimentally validated for the proteins containing both domains, the role performed by each domain on its own is unknown [[cite:PUB00081964]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 4

Transcript Name Description Predicted domains Domain count
PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic-like [Cicer arietinum] gi|502132996|ref|XP_004501612.1| 22
PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic-like [Cicer arietinum] gi|502132996|ref|XP_004501612.1| 28
Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein [Desulfosporosinus orientis DSM 765] gi|374995160|ref|YP_004970659.1| 6
Pyridoxine/pyridoxamine 5'-phosphate oxidase; TAIR: AT5G49970.1 pyridoxin (pyrodoxamine) 5'-phosphate oxidase; Swiss-Prot: sp|Q9LTX3|PPOX1_ARATH Pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic; TrEMBL-Plants: tr|I1JV54|I1JV54_SOYBN NAD(P)H-hydrate epimerase; Found in the gene: LotjaGi1g1v0349900 29

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
TIGR00558 TIGRFAM 1 25.00