Domain Predictions — View

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MF_01629

Source: Hamap

Description

Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH].

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0004733 View details of GO:0004733 AmiGO InterPro QuickGO	Molecular function	Pyridoxamine-phosphate oxidase activity	Catalysis of the reaction: pyridoxamine 5'-phosphate + H2O + O2 = pyridoxal 5'-phosphate + NH3 + hydrogen peroxide.	Subterm of GO:0016641
GO:0008615 View details of GO:0008615 AmiGO InterPro QuickGO	Biological process	Pyridoxine biosynthetic process	The chemical reactions and pathways resulting in the formation of pyridoxine, 2-methyl-3-hydroxy-4,5-bis(hydroxymethyl)pyridine, one of the vitamin B6 compounds.	Subterm of GO:0008614 GO:0019438 GO:0042819 GO:0051188 GO:1901617
GO:0010181 View details of GO:0010181 AmiGO InterPro QuickGO	Molecular function	FMN binding	Interacting selectively and non-covalently with flavin mono nucleotide. Flavin mono nucleotide (FMN) is the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.	Subterm of GO:0032553 GO:0043168 GO:0050662

Associated Lotus transcripts 3

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v1615290.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic-like [Cicer arietinum] gi\|502132996\|ref\|XP_004501612.1\|	Domains G3DSA:2.30.110.10 G3DSA:3.40.50.10260 IPR000659 IPR004443 IPR011576 IPR012349 IPR019576 IPR019740 IPR032976 MF_01629 MF_01966 PF01243 PF03853 PF10590 PS01064 PS51385 PTHR13232 PTHR13232:SF10 SSF50475 SSF64153 TIGR00197 TIGR00558	22
Lj1g3v1615290.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic-like [Cicer arietinum] gi\|502132996\|ref\|XP_004501612.1\|	Domains G3DSA:2.30.110.10 G3DSA:3.40.50.10260 IPR000659 IPR004443 IPR011576 IPR012349 IPR019576 IPR019740 IPR032976 MF_01629 MF_01966 NON_CYTOPLASMIC_DOMAIN PF01243 PF03853 PF10590 PS01064 PS51385 PTHR13232 PTHR13232:SF10 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF50475 SSF64153 SignalP-TM_GRAM_POSITIVE TIGR00197 TIGR00558	28
LotjaGi1g1v0349900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pyridoxine/pyridoxamine 5'-phosphate oxidase; TAIR: AT5G49970.1 pyridoxin (pyrodoxamine) 5'-phosphate oxidase; Swiss-Prot: sp\|Q9LTX3\|PPOX1_ARATH Pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic; TrEMBL-Plants: tr\|I1JV54\|I1JV54_SOYBN NAD(P)H-hydrate epimerase; Found in the gene: LotjaGi1g1v0349900	Domains G3DSA:2.30.110.10 G3DSA:3.40.50.10260 IPR000659 IPR004443 IPR011576 IPR012349 IPR019576 IPR019740 IPR032976 IPR036652 MF_01629 MF_01966 NON_CYTOPLASMIC_DOMAIN PF01243 PF03853 PF10590 PS01064 PS51385 PTHR13232 PTHR13232:SF13 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF50475 SSF64153 SignalP-TM TIGR00197 TIGR00558	29

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TIGR00558	TIGRFAM	1	33.33