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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1615290 |
| Transcript ID | Lj1g3v1615290.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic-like [Cicer arietinum] gi|502132996|ref|XP_004501612.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 28 | 28 | – | – | |
| Phobius | 1 | 28 | 28 | – | – | |
| Phobius | 1 | 12 | 12 | – | – | |
| Phobius | 13 | 23 | 11 | – | – | |
| Phobius | 24 | 28 | 5 | – | – | |
| Phobius | 29 | 543 | 515 | – | – | |
| PANTHER | 59 | 481 | 423 | 4.30E-237 | ||
| PANTHER | 59 | 481 | 423 | 4.30E-237 | – | |
| Gene3D | 87 | 321 | 235 | 4.20E-68 | ||
| SUPERFAMILY | 88 | 317 | 230 | 1.70E-57 | ||
| Hamap | 90 | 325 | 236 | 20.141 | ||
| TIGRFAM | 91 | 285 | 195 | 1.30E-44 | ||
| ProSiteProfiles | 94 | 310 | 217 | 58.611 | ||
| Pfam | 110 | 282 | 173 | 7.10E-35 | ||
| TIGRFAM | 326 | 543 | 218 | 8.40E-85 | ||
| Hamap | 336 | 543 | 208 | 37.895 | ||
| SUPERFAMILY | 343 | 543 | 201 | 9.17E-64 | ||
| Gene3D | 344 | 543 | 200 | 1.10E-81 | ||
| Pfam | 359 | 445 | 87 | 1.10E-26 | ||
| Pfam | 499 | 543 | 45 | 1.20E-17 | ||
| ProSitePatterns | 509 | 522 | 14 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Pyridoxamine-phosphate oxidase activity | Catalysis of the reaction: pyridoxamine 5'-phosphate + H2O + O2 = pyridoxal 5'-phosphate + NH3 + hydrogen peroxide. | ||
| Biological process | Pyridoxine biosynthetic process | The chemical reactions and pathways resulting in the formation of pyridoxine, 2-methyl-3-hydroxy-4,5-bis(hydroxymethyl)pyridine, one of the vitamin B6 compounds. | ||
| Molecular function | FMN binding | Interacting selectively and non-covalently with flavin mono nucleotide. Flavin mono nucleotide (FMN) is the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes. | ||
| Molecular function | Oxidoreductase activity, acting on the CH-NH2 group of donors | Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor. | ||
| Molecular function | Cofactor binding | Interacting selectively and non-covalently with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj1g3v1615290.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1615290.2, powered by CORGI.
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