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IPR013861

Description

IPR013861 is a TMEM115/Pdh1/Rbl19.

<p>This entry represents a group of eukaryotic transmembrane proteins, including TMEM115 from animals, Pdh1 from fission yeasts and Rbl19 from Arabisopsis. Human TMEM115 is an integral membrane protein of the Golgi complex involved in retrograde transport [[cite:PUB00075338]]. Budding yeast TMEM115 homologue, YOL107W, has been shown to localise COP II vesicles [[cite:PUB00016470]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Biological process Retrograde vesicle-mediated transport, Golgi to ER The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG.
Cellular component Integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.

Associated Lotus transcripts 5

Transcript Name Description Predicted domains Domain count
PREDICTED: transmembrane protein 115-like [Glycine max] gi|356498564|ref|XP_003518120.1| 13
Transmembrane protein 115; TAIR: AT3G07950.1 rhomboid protein-like protein; Swiss-Prot: sp|Q8LF05|RBL19_ARATH Rhomboid-like protein 19; TrEMBL-Plants: tr|I3SV60|I3SV60_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0102900 11
Transmembrane protein 115; TAIR: AT3G07950.1 rhomboid protein-like protein; Swiss-Prot: sp|Q8LF05|RBL19_ARATH Rhomboid-like protein 19; TrEMBL-Plants: tr|G7I9J5|G7I9J5_MEDTR Transmembrane protein, putative; Found in the gene: LotjaGi3g1v0284200_LC 3
Transmembrane protein 115; TAIR: AT3G07950.1 rhomboid protein-like protein; Swiss-Prot: sp|Q8LF05|RBL19_ARATH Rhomboid-like protein 19; TrEMBL-Plants: tr|G7I9J5|G7I9J5_MEDTR Transmembrane protein, putative; Found in the gene: LotjaGi5g1v0275700 11
Transmembrane protein 115; TAIR: AT3G07950.1 rhomboid protein-like protein; Swiss-Prot: sp|Q8LF05|RBL19_ARATH Rhomboid-like protein 19; TrEMBL-Plants: tr|G7I9J5|G7I9J5_MEDTR Transmembrane protein, putative; Found in the gene: LotjaGi5g1v0275700 11

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 20.00