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IPR017392

Source: InterPro

Description

IPR017392 is a AP2/ERF transcription factor ERF/PTI6.

<p>This entry represents a group of plant AP2/ERF transcription factors, including pathogenesis-related genes transcriptional activator PTI6 [[cite:PUB00073480]] and ethylene-responsive transcription factor ERF [[cite:PUB00073481]]. PTI6 binds to the GCC-box pathogenesis-related promoter element and activates the defense genes of plants [[cite:PUB00073480]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003700
Molecular function DNA-binding transcription factor activity A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
Subterm of

Associated Lotus transcripts 23

Transcript Name Description Predicted domains Domain count
Lj0g3v0114779.1
– CM0545.620.nc [Lotus japonicus] gi|164564747|dbj|BAF98227.1|
Domains
13
Lj0g3v0150929.1
– PREDICTED: ethylene-responsive transcription factor CRF4-like [Glycine max] gi|356560648|ref|XP_003548602.1|
Domains
13
Lj0g3v0243159.1
– PREDICTED: ethylene-responsive transcription factor WIN1-like [Glycine max] gi|356519349|ref|XP_003528335.1|
Domains
13
Lj0g3v0253889.1
– PREDICTED: ethylene-responsive transcription factor ERF003-like [Cicer arietinum] gi|502174548|ref|XP_004515544.1|
Domains
12
Lj0g3v0284449.1
– Ethylene responsive transcription factor 1a [Medicago truncatula] gi|357463809|ref|XP_003602186.1|
Domains
13
Lj0g3v0293529.1
– PREDICTED: ethylene-responsive transcription factor 4-like [Glycine max] gi|356522656|ref|XP_003529962.1|
Domains
13
Lj1g3v1841220.1
– PREDICTED: protein PPLZ02-like [Glycine max] gi|356507410|ref|XP_003522460.1|
Domains
13
Lj1g3v1911720.1
– PREDICTED: ethylene-responsive transcription factor SHINE 3-like [Glycine max] gi|356515442|ref|XP_003526409.1|
Domains
13
Lj1g3v2623740.1
– PREDICTED: ethylene-responsive transcription factor 4-like [Glycine max] gi|356522656|ref|XP_003529962.1|
Domains
12
Lj1g3v3975310.1
– Transcription factor ERF [Medicago truncatula] gi|116831753|gb|ABK28850.1|
Domains
13
Lj2g3v1068730.1
– Ethylene-responsive transcription factor [Medicago truncatula] gi|357496535|ref|XP_003618556.1|
Domains
14
Lj2g3v2087840.1
– PREDICTED: ethylene-responsive transcription factor CRF2-like [Glycine max] gi|356540410|ref|XP_003538682.1|
Domains
13
Lj2g3v2447140.1
– PREDICTED: pathogenesis-related genes transcriptional activator PTI6-like [Glycine max] gi|356500950|ref|XP_003519293.1|
Domains
13
Lj3g3v0014470.1
– PREDICTED: ethylene-responsive transcription factor ERF003-like [Cicer arietinum] gi|502174548|ref|XP_004515544.1|
Domains
12
Lj3g3v2210420.1
– PREDICTED: ethylene-responsive transcription factor WIN1-like [Glycine max] gi|356519349|ref|XP_003528335.1|
Domains
4
Lj4g3v1770570.1
– Ethylene-responsive transcription factor [Medicago truncatula] gi|357477723|ref|XP_003609147.1|
Domains
13
Lj4g3v2604280.1
– PREDICTED: ethylene-responsive transcription factor ERF015-like [Glycine max] gi|356525286|ref|XP_003531257.1|
Domains
12
Lj4g3v3002550.1
– PREDICTED: ethylene-responsive transcription factor CRF2-like [Cicer arietinum] gi|502139611|ref|XP_004503833.1|
Domains
13
Lj6g3v1984370.1
– PREDICTED: ethylene-responsive transcription factor ESR1-like [Cicer arietinum] gi|502078380|ref|XP_004485926.1|
Domains
13
LotjaGi1g1v0105200.1
– Ethylene-responsive transcription factor, putative; TAIR: AT4G27950.1 cytokinin response factor 4; Swiss-Prot: sp|O04682|PTI6_SOLLC Pathogenesis-related genes transcriptional activator PTI6; TrEMBL-Plants: tr|A0A0K2CTI3|A0A0K2CTI3_SOYBN AP2-EREBP transcription factor; Found in the gene: LotjaGi1g1v0105200
Domains
15
LotjaGi1g1v0257900.1
– Ethylene-responsive transcription factor; TAIR: AT1G21910.1 Integrase-type DNA-binding superfamily protein; Swiss-Prot: sp|Q9SFE4|ERF12_ARATH Ethylene-responsive transcription factor ERF012; TrEMBL-Plants: tr|I3S908|I3S908_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0257900
Domains
15
LotjaGi3g1v0009300.1
– Ethylene-responsive transcription factor; TAIR: AT1G15360.1 Integrase-type DNA-binding superfamily protein; Swiss-Prot: sp|Q9XI33|WIN1_ARATH Ethylene-responsive transcription factor WIN1; TrEMBL-Plants: tr|A0A151SH21|A0A151SH21_CAJCA Ethylene-responsive transcription factor WIN1; Found in the gene: LotjaGi3g1v0009300
Domains
15
LotjaGi6g1v0044600.1
– Ethylene-responsive transcription factor, putative; TAIR: AT4G27950.1 cytokinin response factor 4; Swiss-Prot: sp|O04682|PTI6_SOLLC Pathogenesis-related genes transcriptional activator PTI6; TrEMBL-Plants: tr|A0A0L9VDI0|A0A0L9VDI0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0044600
Domains
15

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 4.35