Domain Predictions — View

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IPR025589

Source: InterPro

Description

IPR025589 is a Topoisomerase C-terminal repeat.

<p>This domain occurs in the C terminus of a number of DNA topoisomerases 1. It is sometimes found repeated.</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 4

Transcript	Name	Description	Predicted domains	Domain count
Lj5g3v0611970.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: DNA topoisomerase 1-like isoform X1 [Cicer arietinum] gi\|502124515\|ref\|XP_004498560.1\|	Domains G3DSA:1.10.460.10 G3DSA:2.70.20.10 G3DSA:3.40.50.140 IPR000380 IPR003601 IPR003602 IPR005733 IPR006171 IPR013497 IPR013498 IPR013824 IPR013825 IPR023405 IPR023406 IPR025589 IPR028612 MF_00952 PF01131 PF01396 PF01751 PF13368 PR00417 PS00396 PS50880 PTHR11390 PTHR11390:SF27 SM00436 SM00437 SM00493 SSF56712 TIGR01051 cd00186 cd03363 mobidb-lite	34
Lj5g3v0611970.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: DNA topoisomerase 1-like isoform X1 [Cicer arietinum] gi\|502124515\|ref\|XP_004498560.1\|	Domains G3DSA:1.10.460.10 G3DSA:2.70.20.10 G3DSA:3.40.50.140 IPR000380 IPR003601 IPR003602 IPR005733 IPR006171 IPR013497 IPR013498 IPR013824 IPR013825 IPR023405 IPR023406 IPR025589 IPR028612 MF_00952 PF01131 PF01396 PF01751 PF13368 PR00417 PS00396 PS50880 PTHR11390 PTHR11390:SF27 SM00436 SM00437 SM00493 SSF56712 TIGR01051 cd00186 cd03363 mobidb-lite	34
LotjaGi5g1v0067100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA topoisomerase family protein; TAIR: AT4G31210.1 DNA topoisomerase, type IA, core; Swiss-Prot: sp\|Q4UM42\|TOP1_RICFE DNA topoisomerase 1; TrEMBL-Plants: tr\|K7M6M6\|K7M6M6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0067100	Domains G3DSA:1.10.290.10 G3DSA:1.10.460.10 G3DSA:2.70.20.10 G3DSA:3.40.50.140 IPR000380 IPR003601 IPR003602 IPR005733 IPR006171 IPR013497 IPR013498 IPR013824 IPR013825 IPR013826 IPR023405 IPR023406 IPR025589 IPR028612 IPR034149 MF_00952 PF01131 PF01396 PF01751 PF13368 PR00417 PS00396 PS50880 PTHR42785 SM00436 SM00437 SM00493 SSF56712 TIGR01051 cd00186 cd03363 mobidb-lite	36
LotjaGi5g1v0067100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA topoisomerase family protein; TAIR: AT4G31210.1 DNA topoisomerase, type IA, core; Swiss-Prot: sp\|Q4UM42\|TOP1_RICFE DNA topoisomerase 1; TrEMBL-Plants: tr\|K7M6M6\|K7M6M6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0067100	Domains G3DSA:1.10.290.10 G3DSA:1.10.460.10 G3DSA:2.70.20.10 G3DSA:3.40.50.140 IPR000380 IPR003601 IPR003602 IPR005733 IPR006171 IPR013497 IPR013498 IPR013824 IPR013825 IPR013826 IPR023405 IPR023406 IPR025589 IPR028612 IPR034149 MF_00952 PF01131 PF01396 PF01751 PF13368 PR00417 PS00396 PS50880 PTHR42785 SM00436 SM00437 SM00493 SSF56712 TIGR01051 cd00186 cd03363 mobidb-lite	36

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	25.00