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IPR025704

Description

IPR025704 is a E3 ubiquitin ligase UBR4, C-terminal.

<p>Proteins containing this domain includes E3 ubiquitin ligase UBR4 from animals, auxin transport protein BIG from plants and protein purity of essence from fruit flies.</p> <p>UBR4, also known as p600, is a member of the N-recognin family, which contains proven and predicted E3 ligases that recognize and degrade proteins containing destabilizing N termini [[cite:PUB00033696]]. It is involved in anoikis, viral transformation and protein degradation [[cite:PUB00057893], [cite:PUB00098226]]. It also has roles in neurogenesis, neuronal migration, neuronal signaling and survival in mammalian brains [[cite:PUB00098225]].</p> <p>BIG is required for auxin efflux and polar auxin transport (PAT) influencing auxin-mediated developmental responses (e.g. cell elongation, apical dominance, lateral root production, inflorescence architecture, general growth and development) [[cite:PUB00057894]]. Auxin transport protein is also involved in the elongation of the pedicels and stem internodes through auxin action, the expression/modulation of light-regulated genes, repression of CAB1 and CAB3 genes in etiolated seedlings, etc [[cite:PUB00057896], [cite:PUB00057897], [cite:PUB00057898], [cite:PUB00057899], [cite:PUB00057900], [cite:PUB00057901], [cite:PUB00057902], [cite:PUB00057903]].</p> <p>Protein purity of essence, found in Drosophila melanogaster, has a role in growth of the perineurial glial layer of the larval peripheral nerve and it may have a role in male fertility and eye development or function [[cite:PUB00057904], [cite:PUB00057905], [cite:PUB00057906]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 2

Transcript Name Description Predicted domains Domain count
Auxin transport protein BIG; TAIR: AT3G02260.2 auxin transport protein (BIG); Swiss-Prot: sp|Q9SRU2|BIG_ARATH Auxin transport protein BIG; TrEMBL-Plants: tr|G7KRX3|G7KRX3_MEDTR Auxin transporter BIG; Found in the gene: LotjaGi1g1v0519700 23
Auxin transport protein BIG; TAIR: AT3G02260.4 auxin transport protein (BIG); Swiss-Prot: sp|Q9SRU2|BIG_ARATH Auxin transport protein BIG; TrEMBL-Plants: tr|G7KRX3|G7KRX3_MEDTR Auxin transporter BIG; Found in the gene: LotjaGi1g1v0519700 21

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 50.00