Domain Predictions — View

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cd02249

Source: CDD

Description

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 2

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi1g1v0519700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Auxin transport protein BIG; TAIR: AT3G02260.2 auxin transport protein (BIG); Swiss-Prot: sp\|Q9SRU2\|BIG_ARATH Auxin transport protein BIG; TrEMBL-Plants: tr\|G7KRX3\|G7KRX3_MEDTR Auxin transporter BIG; Found in the gene: LotjaGi1g1v0519700	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.60.90 IPR000433 IPR003126 IPR016024 IPR025704 IPR043145 NON_CYTOPLASMIC_DOMAIN PF00569 PF13764 PS01357 PS50135 PS51157 PTHR21725 PTHR21725:SF1 SM00291 SM00396 SSF101908 SSF48371 SSF57850 TRANSMEMBRANE cd02249 mobidb-lite	23
LotjaGi1g1v0519700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Auxin transport protein BIG; TAIR: AT3G02260.4 auxin transport protein (BIG); Swiss-Prot: sp\|Q9SRU2\|BIG_ARATH Auxin transport protein BIG; TrEMBL-Plants: tr\|G7KRX3\|G7KRX3_MEDTR Auxin transporter BIG; Found in the gene: LotjaGi1g1v0519700	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.60.90 IPR000433 IPR003126 IPR025704 IPR043145 NON_CYTOPLASMIC_DOMAIN PF00569 PF13764 PS01357 PS50135 PS51157 PTHR21725 PTHR21725:SF1 SM00291 SM00396 SSF101908 SSF57850 TRANSMEMBRANE cd02249 mobidb-lite	21

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	50.00