Domain Predictions — View

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IPR032193

Source: InterPro

Description

IPR032193 is a CCR4-NOT transcription complex subunit 1, TTP binding domain.

<p>This entry represents the TTP binding domain of CCR4-NOT transcription complex subunit 1. It adopts a MIF4G (middle portion of eIF4G) fold [[cite:PUB00076221]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 9

Transcript	Name	Description	Predicted domains	Domain count
Lj3g3v0439760.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: CCR4-NOT transcription complex subunit 1-like [Glycine max] gi\|356523091\|ref\|XP_003530175.1\|	Domains CYTOPLASMIC_DOMAIN IPR032191 IPR032193 IPR032194 NON_CYTOPLASMIC_DOMAIN PF16415 PF16417 PF16418 PTHR13162 PTHR13162:SF8 TMhelix TRANSMEMBRANE	12
Lj3g3v0439760.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: CCR4-NOT transcription complex subunit 1-like [Glycine max] gi\|356523091\|ref\|XP_003530175.1\|	Domains IPR024557 IPR032191 IPR032193 IPR032194 PF12842 PF16415 PF16417 PF16418 PTHR13162 PTHR13162:SF8	10
Lj3g3v3225370.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: CCR4-NOT transcription complex subunit 1-like [Glycine max] gi\|356523091\|ref\|XP_003530175.1\|	Domains CYTOPLASMIC_DOMAIN IPR007196 IPR024557 IPR032191 IPR032193 IPR032194 NON_CYTOPLASMIC_DOMAIN PF04054 PF12842 PF16415 PF16417 PF16418 PTHR13162 PTHR13162:SF8 TRANSMEMBRANE mobidb-lite	16
LotjaGi3g1v0050800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	CCR4-NOT transcription complex subunit 1; TAIR: AT1G02080.2 transcription regulator; Swiss-Prot: sp\|A1A5H6\|CNOT1_DANRE CCR4-NOT transcription complex subunit 1; TrEMBL-Plants: tr\|I1KJP7\|I1KJP7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0050800	Domains CYTOPLASMIC_DOMAIN G3DSA:1.25.40.180 G3DSA:1.25.40.790 G3DSA:1.25.40.800 G3DSA:1.25.40.840 IPR007196 IPR016021 IPR024557 IPR032191 IPR032193 IPR032194 IPR038535 IPR040398 NON_CYTOPLASMIC_DOMAIN PF04054 PF12842 PF16415 PF16417 PF16418 PTHR13162 PTHR13162:SF11 TRANSMEMBRANE mobidb-lite	23
LotjaGi3g1v0050800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	CCR4-NOT transcription complex subunit 1; TAIR: AT1G02080.2 transcription regulator; Swiss-Prot: sp\|A1A5H6\|CNOT1_DANRE CCR4-NOT transcription complex subunit 1; TrEMBL-Plants: tr\|I1KJP7\|I1KJP7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0050800	Domains CYTOPLASMIC_DOMAIN G3DSA:1.25.40.180 G3DSA:1.25.40.790 G3DSA:1.25.40.800 G3DSA:1.25.40.840 IPR007196 IPR016021 IPR024557 IPR032191 IPR032193 IPR032194 IPR038535 IPR040398 NON_CYTOPLASMIC_DOMAIN PF04054 PF12842 PF16415 PF16417 PF16418 PTHR13162 PTHR13162:SF11 TRANSMEMBRANE mobidb-lite	23
LotjaGi3g1v0050800.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	CCR4-NOT transcription complex subunit 1; TAIR: AT1G02080.2 transcription regulator; Swiss-Prot: sp\|A1A5H6\|CNOT1_DANRE CCR4-NOT transcription complex subunit 1; TrEMBL-Plants: tr\|A0A0B2PP65\|A0A0B2PP65_GLYSO CCR4-NOT transcription complex subunit 1; Found in the gene: LotjaGi3g1v0050800	Domains CYTOPLASMIC_DOMAIN G3DSA:1.25.40.180 G3DSA:1.25.40.790 G3DSA:1.25.40.800 G3DSA:1.25.40.840 IPR007196 IPR016021 IPR024557 IPR032191 IPR032193 IPR032194 IPR038535 IPR040398 NON_CYTOPLASMIC_DOMAIN PF04054 PF12842 PF16415 PF16417 PF16418 PTHR13162 PTHR13162:SF11 TRANSMEMBRANE mobidb-lite	23
LotjaGi3g1v0050800.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	CCR4-NOT transcription complex subunit 1; TAIR: AT1G02080.2 transcription regulator; Swiss-Prot: sp\|A1A5H6\|CNOT1_DANRE CCR4-NOT transcription complex subunit 1; TrEMBL-Plants: tr\|A0A0B2PP65\|A0A0B2PP65_GLYSO CCR4-NOT transcription complex subunit 1; Found in the gene: LotjaGi3g1v0050800	Domains CYTOPLASMIC_DOMAIN G3DSA:1.25.40.180 G3DSA:1.25.40.790 G3DSA:1.25.40.800 G3DSA:1.25.40.840 IPR007196 IPR016021 IPR024557 IPR032191 IPR032193 IPR032194 IPR038535 IPR040398 NON_CYTOPLASMIC_DOMAIN PF04054 PF12842 PF16415 PF16417 PF16418 PTHR13162 PTHR13162:SF11 TRANSMEMBRANE mobidb-lite	23
LotjaGi3g1v0050800.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	CCR4-NOT transcription complex subunit 1; TAIR: AT1G02080.2 transcription regulator; Swiss-Prot: sp\|A1A5H6\|CNOT1_DANRE CCR4-NOT transcription complex subunit 1; TrEMBL-Plants: tr\|A0A0R0J669\|A0A0R0J669_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0050800	Domains CYTOPLASMIC_DOMAIN G3DSA:1.25.40.180 G3DSA:1.25.40.790 G3DSA:1.25.40.800 G3DSA:1.25.40.840 IPR007196 IPR016021 IPR024557 IPR032191 IPR032193 IPR032194 IPR038535 IPR040398 NON_CYTOPLASMIC_DOMAIN PF04054 PF12842 PF16415 PF16417 PF16418 PTHR13162 PTHR13162:SF11 TRANSMEMBRANE mobidb-lite	23
LotjaGi3g1v0050800.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	CCR4-NOT transcription complex subunit 1; TAIR: AT1G02080.2 transcription regulator; Swiss-Prot: sp\|A1A5H6\|CNOT1_DANRE CCR4-NOT transcription complex subunit 1; TrEMBL-Plants: tr\|A0A0R0J669\|A0A0R0J669_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0050800	Domains CYTOPLASMIC_DOMAIN G3DSA:1.25.40.180 G3DSA:1.25.40.790 G3DSA:1.25.40.800 G3DSA:1.25.40.840 IPR007196 IPR016021 IPR024557 IPR032191 IPR032193 IPR032194 IPR038535 IPR040398 NON_CYTOPLASMIC_DOMAIN PF04054 PF12842 PF16415 PF16417 PF16418 PTHR13162 PTHR13162:SF11 TRANSMEMBRANE mobidb-lite	23

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	11.11