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IPR034288

Description

IPR034288 is a Laccase, first cupredoxin domain.

<p>Laccase is a blue multicopper oxidase (MCO) which catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. Laccase has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Plants usually express multiple laccase genes, but their precise physiological/biochemical roles remain largely unclear [[cite:PUB00083093]]. In cotton (Gossypium spp.), laccases may be involved in fibre development [[cite:PUB00083101]].</p> <p>MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper centre and transferring them to the active site trinuclear copper centre. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3 [[cite:PUB00021107], [cite:PUB00083029]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Copper ion binding Interacting selectively and non-covalently with copper (Cu) ions.

Associated Lotus transcripts 26

Transcript Name Description Predicted domains Domain count
Laccase; TAIR: AT2G40370.1 laccase 5; Swiss-Prot: sp|Q9SIY8|LAC5_ARATH Laccase-5; TrEMBL-Plants: tr|A0A0S3RKD8|A0A0S3RKD8_PHAAN Laccase; Found in the gene: LotjaGi1g1v0073600 31
Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|A0A151S1M1|A0A151S1M1_CAJCA Laccase; Found in the gene: LotjaGi1g1v0081300 30
Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|A0A151S1M1|A0A151S1M1_CAJCA Laccase; Found in the gene: LotjaGi1g1v0081300 24
Laccase; TAIR: AT2G30210.1 laccase 3; Swiss-Prot: sp|Q56YT0|LAC3_ARATH Laccase-3; TrEMBL-Plants: tr|I1JHH8|I1JHH8_SOYBN Laccase; Found in the gene: LotjaGi1g1v0114400 29
Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|I1JHB0|I1JHB0_SOYBN Laccase; Found in the gene: LotjaGi1g1v0123400 29
Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|G7KE42|G7KE42_MEDTR Laccase; Found in the gene: LotjaGi1g1v0123400 23
Laccase; TAIR: AT5G01040.1 laccase 8; Swiss-Prot: sp|Q9LFD2|LAC8_ARATH Laccase-8; TrEMBL-Plants: tr|A0A072U0V9|A0A072U0V9_MEDTR Laccase; Found in the gene: LotjaGi1g1v0218900 29
Laccase; TAIR: AT5G60020.1 laccase 17; Swiss-Prot: sp|Q9FJD5|LAC17_ARATH Laccase-17; TrEMBL-Plants: tr|A0A072U047|A0A072U047_MEDTR Laccase; Found in the gene: LotjaGi1g1v0579400 29
Laccase; TAIR: AT5G60020.1 laccase 17; Swiss-Prot: sp|Q9FJD5|LAC17_ARATH Laccase-17; TrEMBL-Plants: tr|I1KZE6|I1KZE6_SOYBN Laccase; Found in the gene: LotjaGi1g1v0582000 30
Laccase; TAIR: AT5G60020.1 laccase 17; Swiss-Prot: sp|Q9FJD5|LAC17_ARATH Laccase-17; TrEMBL-Plants: tr|A0A072U047|A0A072U047_MEDTR Laccase; Found in the gene: LotjaGi1g1v0582200 29
Laccase; TAIR: AT5G03260.1 laccase 11; Swiss-Prot: sp|Q8VZA1|LAC11_ARATH Laccase-11; TrEMBL-Plants: tr|I1LHT8|I1LHT8_SOYBN Laccase; Found in the gene: LotjaGi2g1v0388900 31
Laccase; TAIR: AT5G03260.1 laccase 11; Swiss-Prot: sp|Q8VZA1|LAC11_ARATH Laccase-11; TrEMBL-Plants: tr|V7CFI0|V7CFI0_PHAVU Laccase; Found in the gene: LotjaGi2g1v0389000 31
Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|A0A1J7HEL7|A0A1J7HEL7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0211300 29
Laccase; TAIR: AT2G46570.1 laccase 6; Swiss-Prot: sp|Q9ZPY2|LAC6_ARATH Laccase-6; TrEMBL-Plants: tr|A0A072TM83|A0A072TM83_MEDTR Laccase; Found in the gene: LotjaGi3g1v0398000 29
Laccase; TAIR: AT2G29130.1 laccase 2; Swiss-Prot: sp|O81081|LAC2_ARATH Laccase-2; TrEMBL-Plants: tr|G7JUW8|G7JUW8_MEDTR Laccase; Found in the gene: LotjaGi3g1v0489900 30
Laccase; TAIR: AT2G29130.1 laccase 2; Swiss-Prot: sp|O81081|LAC2_ARATH Laccase-2; TrEMBL-Plants: tr|I1LQN6|I1LQN6_SOYBN Laccase; Found in the gene: LotjaGi3g1v0489900 23
Laccase; TAIR: AT1G18140.1 laccase 1; Swiss-Prot: sp|Q9LMS3|LAC1_ARATH Laccase-1; TrEMBL-Plants: tr|M5WFA5|M5WFA5_PRUPE Laccase; Found in the gene: LotjaGi4g1v0462700 32
Laccase; TAIR: AT5G09360.1 laccase 14; Swiss-Prot: sp|Q6Z8L2|LAC9_ORYSJ Putative laccase-9; TrEMBL-Plants: tr|A0A1J7FTU7|A0A1J7FTU7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0283500 19
Laccase; TAIR: AT5G09360.1 laccase 14; Swiss-Prot: sp|Q9FY79|LAC14_ARATH Laccase-14; TrEMBL-Plants: tr|A0A1J7FTU7|A0A1J7FTU7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0283600 29
Laccase; TAIR: AT5G48100.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|Q84J37|LAC15_ARATH Laccase-15; TrEMBL-Plants: tr|G7J6C9|G7J6C9_MEDTR Laccase; Found in the gene: LotjaGi5g1v0283800 30
Laccase; TAIR: AT2G40370.1 laccase 5; Swiss-Prot: sp|Q9SIY8|LAC5_ARATH Laccase-5; TrEMBL-Plants: tr|I1MYY9|I1MYY9_SOYBN Laccase; Found in the gene: LotjaGi6g1v0080700 30
Laccase; TAIR: AT2G40370.1 laccase 5; Swiss-Prot: sp|Q9FLB5|LAC12_ARATH Laccase-12; TrEMBL-Plants: tr|I1MYY9|I1MYY9_SOYBN Laccase; Found in the gene: LotjaGi6g1v0080700 29
Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|I1N014|I1N014_SOYBN Laccase; Found in the gene: LotjaGi6g1v0132300 29
Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|I1N014|I1N014_SOYBN Laccase; Found in the gene: LotjaGi6g1v0132300 23
Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|I1N014|I1N014_SOYBN Laccase; Found in the gene: LotjaGi6g1v0132300 23
Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|I1N014|I1N014_SOYBN Laccase; Found in the gene: LotjaGi6g1v0132300 23

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd13897 CDD 1 3.85