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laccase: laccase
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Lignin catabolic process | The chemical reactions and pathways resulting in the breakdown of lignins, a class of polymers of phenylpropanoid units. | ||
| Cellular component | Apoplast | The cell membranes and intracellular regions in a plant are connected through plasmodesmata, and plants may be described as having two major compartments: the living symplast and the non-living apoplast. The apoplast is external to the plasma membrane and includes cell walls, intercellular spaces and the lumen of dead structures such as xylem vessels. Water and solutes pass freely through it. | ||
| Molecular function | Hydroquinone:oxygen oxidoreductase activity | Catalysis of the reaction: 4 hydroquinone + O2 = 4 benzosemiquinone + 4 H2O. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: laccase-5-like [Glycine max] gi|356540011|ref|XP_003538485.1| | 28 | ||
| – | PREDICTED: laccase-8-like [Cicer arietinum] gi|502103902|ref|XP_004492390.1| | 28 | ||
| – | Laccase [Medicago truncatula] gi|357472833|ref|XP_003606701.1| | 23 | ||
| – | PREDICTED: laccase-4-like [Glycine max] gi|356506772|ref|XP_003522150.1| | 26 | ||
| – | PREDICTED: laccase-7-like [Glycine max] gi|356520969|ref|XP_003529131.1| | 15 | ||
| – | PREDICTED: laccase-7-like [Glycine max] gi|356520969|ref|XP_003529131.1| | 24 | ||
| – | PREDICTED: laccase-17-like [Glycine max] gi|356527433|ref|XP_003532315.1| | 27 | ||
| – | PREDICTED: laccase-17-like [Cicer arietinum] gi|502103605|ref|XP_004492322.1| | 26 | ||
| – | Laccase [Medicago truncatula] gi|357492551|ref|XP_003616564.1| | 27 | ||
| – | Laccase [Medicago truncatula] gi|357472833|ref|XP_003606701.1| | 23 | ||
| – | PREDICTED: laccase-11-like [Glycine max] gi|356496745|ref|XP_003517226.1| | 28 | ||
| – | PREDICTED: laccase-11-like [Glycine max] gi|356495402|ref|XP_003516567.1| | 28 | ||
| – | PREDICTED: laccase-3-like [Glycine max] gi|356498985|ref|XP_003518325.1| | 26 | ||
| – | PREDICTED: laccase-3-like [Cicer arietinum] gi|502096208|ref|XP_004490661.1| | 17 | ||
| – | PREDICTED: laccase-5-like [Glycine max] gi|356551363|ref|XP_003544045.1| | 28 | ||
| – | PREDICTED: laccase-6-like [Glycine max] gi|356522496|ref|XP_003529882.1| | 26 | ||
| – | PREDICTED: laccase-4-like [Glycine max] gi|356498932|ref|XP_003518300.1| | 26 | ||
| – | PREDICTED: laccase-14 [Vitis vinifera] gi|359495139|ref|XP_002264394.2| | 26 | ||
| – | PREDICTED: laccase-4-like [Glycine max] gi|356566153|ref|XP_003551299.1| | 26 | ||
| – | Laccase; TAIR: AT2G40370.1 laccase 5; Swiss-Prot: sp|Q9SIY8|LAC5_ARATH Laccase-5; TrEMBL-Plants: tr|A0A0S3RKD8|A0A0S3RKD8_PHAAN Laccase; Found in the gene: LotjaGi1g1v0073600 | 31 | ||
| – | Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|A0A151S1M1|A0A151S1M1_CAJCA Laccase; Found in the gene: LotjaGi1g1v0081300 | 30 | ||
| – | Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|A0A151S1M1|A0A151S1M1_CAJCA Laccase; Found in the gene: LotjaGi1g1v0081300 | 24 | ||
| – | Laccase; TAIR: AT2G30210.1 laccase 3; Swiss-Prot: sp|Q56YT0|LAC3_ARATH Laccase-3; TrEMBL-Plants: tr|I1JHH8|I1JHH8_SOYBN Laccase; Found in the gene: LotjaGi1g1v0114400 | 29 | ||
| – | Laccase; TAIR: AT2G30210.1 laccase 3; Swiss-Prot: sp|Q56YT0|LAC3_ARATH Laccase-3; TrEMBL-Plants: tr|G7JZP3|G7JZP3_MEDTR Laccase; Found in the gene: LotjaGi1g1v0114400 | 21 | ||
| – | Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|I1JHB0|I1JHB0_SOYBN Laccase; Found in the gene: LotjaGi1g1v0123400 | 29 | ||
| – | Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|G7KE42|G7KE42_MEDTR Laccase; Found in the gene: LotjaGi1g1v0123400 | 23 | ||
| – | Laccase; TAIR: AT5G01040.1 laccase 8; Swiss-Prot: sp|Q9LFD2|LAC8_ARATH Laccase-8; TrEMBL-Plants: tr|A0A072U0V9|A0A072U0V9_MEDTR Laccase; Found in the gene: LotjaGi1g1v0218900 | 29 | ||
| – | Laccase; TAIR: AT5G60020.1 laccase 17; Swiss-Prot: sp|Q9FJD5|LAC17_ARATH Laccase-17; TrEMBL-Plants: tr|A0A072U047|A0A072U047_MEDTR Laccase; Found in the gene: LotjaGi1g1v0579400 | 29 | ||
| – | Laccase; TAIR: AT5G60020.1 laccase 17; Swiss-Prot: sp|Q9FJD5|LAC17_ARATH Laccase-17; TrEMBL-Plants: tr|A0A151QZC4|A0A151QZC4_CAJCA Laccase-17; Found in the gene: LotjaGi1g1v0582000 | 19 | ||
| – | Laccase; TAIR: AT5G60020.1 laccase 17; Swiss-Prot: sp|Q9FJD5|LAC17_ARATH Laccase-17; TrEMBL-Plants: tr|I1KZE6|I1KZE6_SOYBN Laccase; Found in the gene: LotjaGi1g1v0582000 | 30 | ||
| – | Laccase; TAIR: AT5G60020.1 laccase 17; Swiss-Prot: sp|Q9FJD5|LAC17_ARATH Laccase-17; TrEMBL-Plants: tr|A0A072U047|A0A072U047_MEDTR Laccase; Found in the gene: LotjaGi1g1v0582200 | 29 | ||
| – | Laccase; TAIR: AT5G03260.1 laccase 11; Swiss-Prot: sp|Q8VZA1|LAC11_ARATH Laccase-11; TrEMBL-Plants: tr|I1LHT8|I1LHT8_SOYBN Laccase; Found in the gene: LotjaGi2g1v0388900 | 31 | ||
| – | Laccase; TAIR: AT5G03260.1 laccase 11; Swiss-Prot: sp|Q8VZA1|LAC11_ARATH Laccase-11; TrEMBL-Plants: tr|V7CFI0|V7CFI0_PHAVU Laccase; Found in the gene: LotjaGi2g1v0389000 | 31 | ||
| – | Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|A0A1J7HEL7|A0A1J7HEL7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0211300 | 29 | ||
| – | Laccase; TAIR: AT2G46570.1 laccase 6; Swiss-Prot: sp|Q9ZPY2|LAC6_ARATH Laccase-6; TrEMBL-Plants: tr|A0A1J7GP42|A0A1J7GP42_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0398000 | 19 | ||
| – | Laccase; TAIR: AT2G46570.1 laccase 6; Swiss-Prot: sp|Q9ZPY2|LAC6_ARATH Laccase-6; TrEMBL-Plants: tr|A0A072TM83|A0A072TM83_MEDTR Laccase; Found in the gene: LotjaGi3g1v0398000 | 29 | ||
| – | Laccase; TAIR: AT2G29130.1 laccase 2; Swiss-Prot: sp|O81081|LAC2_ARATH Laccase-2; TrEMBL-Plants: tr|G7JUW8|G7JUW8_MEDTR Laccase; Found in the gene: LotjaGi3g1v0489900 | 30 | ||
| – | Laccase; TAIR: AT2G29130.1 laccase 2; Swiss-Prot: sp|O81081|LAC2_ARATH Laccase-2; TrEMBL-Plants: tr|I1LQN6|I1LQN6_SOYBN Laccase; Found in the gene: LotjaGi3g1v0489900 | 23 | ||
| – | Laccase; TAIR: AT1G18140.1 laccase 1; Swiss-Prot: sp|Q9LMS3|LAC1_ARATH Laccase-1; TrEMBL-Plants: tr|M5WFA5|M5WFA5_PRUPE Laccase; Found in the gene: LotjaGi4g1v0462700 | 32 | ||
| – | Laccase; TAIR: AT5G09360.1 laccase 14; Swiss-Prot: sp|Q9FY79|LAC14_ARATH Laccase-14; TrEMBL-Plants: tr|A0A1J7FTU7|A0A1J7FTU7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0283600 | 29 | ||
| – | Laccase; TAIR: AT5G48100.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|Q84J37|LAC15_ARATH Laccase-15; TrEMBL-Plants: tr|G7J6C9|G7J6C9_MEDTR Laccase; Found in the gene: LotjaGi5g1v0283800 | 30 | ||
| – | Laccase; TAIR: AT2G40370.1 laccase 5; Swiss-Prot: sp|Q9SIY8|LAC5_ARATH Laccase-5; TrEMBL-Plants: tr|I1MYY9|I1MYY9_SOYBN Laccase; Found in the gene: LotjaGi6g1v0080700 | 30 | ||
| – | Laccase; TAIR: AT2G40370.1 laccase 5; Swiss-Prot: sp|Q9FLB5|LAC12_ARATH Laccase-12; TrEMBL-Plants: tr|A0A0B2PB28|A0A0B2PB28_GLYSO Laccase; Found in the gene: LotjaGi6g1v0080700 | 21 | ||
| – | Laccase; TAIR: AT2G40370.1 laccase 5; Swiss-Prot: sp|Q9FLB5|LAC12_ARATH Laccase-12; TrEMBL-Plants: tr|A0A0B2PB28|A0A0B2PB28_GLYSO Laccase; Found in the gene: LotjaGi6g1v0080700 | 21 | ||
| – | Laccase; TAIR: AT2G40370.1 laccase 5; Swiss-Prot: sp|Q9FLB5|LAC12_ARATH Laccase-12; TrEMBL-Plants: tr|I1MYY9|I1MYY9_SOYBN Laccase; Found in the gene: LotjaGi6g1v0080700 | 29 | ||
| – | Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|I1N014|I1N014_SOYBN Laccase; Found in the gene: LotjaGi6g1v0132300 | 29 | ||
| – | Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|I1N014|I1N014_SOYBN Laccase; Found in the gene: LotjaGi6g1v0132300 | 23 | ||
| – | Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|I1N014|I1N014_SOYBN Laccase; Found in the gene: LotjaGi6g1v0132300 | 23 | ||
| – | Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|I1N014|I1N014_SOYBN Laccase; Found in the gene: LotjaGi6g1v0132300 | 23 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd13897 | CDD | 1 | 2.04 |