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IPR034289 is a Laccase, third cupredoxin domain.
<p>Laccase is a blue multicopper oxidase (MCO) which catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. Laccase has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Plants usually express multiple laccase genes, but their precise physiological/biochemical roles remain largely unclear [[cite:PUB00083093]]. In cotton (Gossypium spp.), laccases may be involved in fibre development [[cite:PUB00083101]].</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Copper ion binding | Interacting selectively and non-covalently with copper (Cu) ions. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Laccase; TAIR: AT2G40370.1 laccase 5; Swiss-Prot: sp|Q9SIY8|LAC5_ARATH Laccase-5; TrEMBL-Plants: tr|A0A0S3RKD8|A0A0S3RKD8_PHAAN Laccase; Found in the gene: LotjaGi1g1v0073600 | 31 | ||
| – | Laccase; TAIR: AT2G40370.1 laccase 5; Swiss-Prot: sp|Q9SIY8|LAC5_ARATH Laccase-5; TrEMBL-Plants: tr|V7B764|V7B764_PHAVU Laccase; Found in the gene: LotjaGi1g1v0073600 | 15 | ||
| – | Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|A0A151S1M1|A0A151S1M1_CAJCA Laccase; Found in the gene: LotjaGi1g1v0081300 | 30 | ||
| – | Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|A0A151S1M1|A0A151S1M1_CAJCA Laccase; Found in the gene: LotjaGi1g1v0081300 | 24 | ||
| – | Laccase; TAIR: AT2G30210.1 laccase 3; Swiss-Prot: sp|Q56YT0|LAC3_ARATH Laccase-3; TrEMBL-Plants: tr|I1JHH8|I1JHH8_SOYBN Laccase; Found in the gene: LotjaGi1g1v0114400 | 29 | ||
| – | Laccase; TAIR: AT2G30210.1 laccase 3; Swiss-Prot: sp|Q56YT0|LAC3_ARATH Laccase-3; TrEMBL-Plants: tr|G7JZP3|G7JZP3_MEDTR Laccase; Found in the gene: LotjaGi1g1v0114400 | 21 | ||
| – | Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|I1JHB0|I1JHB0_SOYBN Laccase; Found in the gene: LotjaGi1g1v0123400 | 29 | ||
| – | Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|G7KE42|G7KE42_MEDTR Laccase; Found in the gene: LotjaGi1g1v0123400 | 23 | ||
| – | Laccase; TAIR: AT5G60020.1 laccase 17; Swiss-Prot: sp|Q9FJD5|LAC17_ARATH Laccase-17; TrEMBL-Plants: tr|A0A072U047|A0A072U047_MEDTR Laccase; Found in the gene: LotjaGi1g1v0579400 | 29 | ||
| – | Laccase; TAIR: AT5G60020.1 laccase 17; Swiss-Prot: sp|Q9FJD5|LAC17_ARATH Laccase-17; TrEMBL-Plants: tr|A0A151QZC4|A0A151QZC4_CAJCA Laccase-17; Found in the gene: LotjaGi1g1v0582000 | 19 | ||
| – | Laccase; TAIR: AT5G60020.1 laccase 17; Swiss-Prot: sp|Q9FJD5|LAC17_ARATH Laccase-17; TrEMBL-Plants: tr|I1KZE6|I1KZE6_SOYBN Laccase; Found in the gene: LotjaGi1g1v0582000 | 30 | ||
| – | Laccase; TAIR: AT5G60020.1 laccase 17; Swiss-Prot: sp|Q9FJD5|LAC17_ARATH Laccase-17; TrEMBL-Plants: tr|A0A072U047|A0A072U047_MEDTR Laccase; Found in the gene: LotjaGi1g1v0582200 | 29 | ||
| – | Laccase; TAIR: AT5G03260.1 laccase 11; Swiss-Prot: sp|Q8VZA1|LAC11_ARATH Laccase-11; TrEMBL-Plants: tr|I1LHT8|I1LHT8_SOYBN Laccase; Found in the gene: LotjaGi2g1v0388900 | 31 | ||
| – | Laccase; TAIR: AT5G03260.1 laccase 11; Swiss-Prot: sp|Q8VZA1|LAC11_ARATH Laccase-11; TrEMBL-Plants: tr|V7CFI0|V7CFI0_PHAVU Laccase; Found in the gene: LotjaGi2g1v0389000 | 31 | ||
| – | Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|A0A1J7HEL7|A0A1J7HEL7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0211300 | 29 | ||
| – | Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|A0A0L9VT48|A0A0L9VT48_PHAAN Laccase; Found in the gene: LotjaGi3g1v0211300 | 13 | ||
| – | Laccase; TAIR: AT2G46570.1 laccase 6; Swiss-Prot: sp|Q9ZPY2|LAC6_ARATH Laccase-6; TrEMBL-Plants: tr|A0A1J7GP42|A0A1J7GP42_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0398000 | 19 | ||
| – | Laccase; TAIR: AT2G46570.1 laccase 6; Swiss-Prot: sp|Q9ZPY2|LAC6_ARATH Laccase-6; TrEMBL-Plants: tr|A0A072TM83|A0A072TM83_MEDTR Laccase; Found in the gene: LotjaGi3g1v0398000 | 29 | ||
| – | Laccase; TAIR: AT2G29130.1 laccase 2; Swiss-Prot: sp|O81081|LAC2_ARATH Laccase-2; TrEMBL-Plants: tr|G7JUW8|G7JUW8_MEDTR Laccase; Found in the gene: LotjaGi3g1v0489900 | 30 | ||
| – | Laccase; TAIR: AT2G29130.1 laccase 2; Swiss-Prot: sp|O81081|LAC2_ARATH Laccase-2; TrEMBL-Plants: tr|I1LQN6|I1LQN6_SOYBN Laccase; Found in the gene: LotjaGi3g1v0489900 | 23 | ||
| – | Laccase; TAIR: AT1G18140.1 laccase 1; Swiss-Prot: sp|Q9LMS3|LAC1_ARATH Laccase-1; TrEMBL-Plants: tr|M5WFA5|M5WFA5_PRUPE Laccase; Found in the gene: LotjaGi4g1v0462700 | 32 | ||
| – | Laccase; TAIR: AT5G09360.1 laccase 14; Swiss-Prot: sp|Q9FY79|LAC14_ARATH Laccase-14; TrEMBL-Plants: tr|A0A1J7FTU7|A0A1J7FTU7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0283600 | 29 | ||
| – | Laccase; TAIR: AT5G09360.1 laccase 14; Swiss-Prot: sp|Q9FY79|LAC14_ARATH Laccase-14; TrEMBL-Plants: tr|A0A1J7FTU7|A0A1J7FTU7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0283700 | 15 | ||
| – | Laccase; TAIR: AT5G48100.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|Q84J37|LAC15_ARATH Laccase-15; TrEMBL-Plants: tr|G7J6C9|G7J6C9_MEDTR Laccase; Found in the gene: LotjaGi5g1v0283800 | 30 | ||
| – | Laccase; TAIR: AT2G40370.1 laccase 5; Swiss-Prot: sp|Q9SIY8|LAC5_ARATH Laccase-5; TrEMBL-Plants: tr|I1MYY9|I1MYY9_SOYBN Laccase; Found in the gene: LotjaGi6g1v0080700 | 30 | ||
| – | Laccase; TAIR: AT2G40370.1 laccase 5; Swiss-Prot: sp|Q9FLB5|LAC12_ARATH Laccase-12; TrEMBL-Plants: tr|A0A0B2PB28|A0A0B2PB28_GLYSO Laccase; Found in the gene: LotjaGi6g1v0080700 | 21 | ||
| – | Laccase; TAIR: AT2G40370.1 laccase 5; Swiss-Prot: sp|Q9FLB5|LAC12_ARATH Laccase-12; TrEMBL-Plants: tr|A0A0B2PB28|A0A0B2PB28_GLYSO Laccase; Found in the gene: LotjaGi6g1v0080700 | 21 | ||
| – | Laccase; TAIR: AT2G40370.1 laccase 5; Swiss-Prot: sp|Q9FLB5|LAC12_ARATH Laccase-12; TrEMBL-Plants: tr|I1MYY9|I1MYY9_SOYBN Laccase; Found in the gene: LotjaGi6g1v0080700 | 29 | ||
| – | Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|I1N014|I1N014_SOYBN Laccase; Found in the gene: LotjaGi6g1v0132300 | 29 | ||
| – | Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|I1N014|I1N014_SOYBN Laccase; Found in the gene: LotjaGi6g1v0132300 | 23 | ||
| – | Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|I1N014|I1N014_SOYBN Laccase; Found in the gene: LotjaGi6g1v0132300 | 23 | ||
| – | Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|I1N014|I1N014_SOYBN Laccase; Found in the gene: LotjaGi6g1v0132300 | 23 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd13897 | CDD | 1 | 3.13 |