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IPR035670 is a Plant AGD1/2/3/4, BAR domain.
<p>The plant protein SCARFACE (SFC, also known as AGD) is an Arf GTPase Activating Protein (GAP) that plays a role in the trafficking of auxin efflux regulators from the plasma membrane to the endosome. It is required for the normal vein patterning in leaves [[cite:PUB00085839], [cite:PUB00085840]]. SCF contains an N-terminal BAR domain, followed by a Pleckstrin Homology (PH) domain, an Arf GAP domain, and C-terminal ankyrin (ANK) repeats. This entry represents the BAR domain found in plant AGD1/2/3/4 and homologues are also found in chlorophytes.</p> <p>BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions including organelle biogenesis, membrane trafficking or remodeling, and cell division and migration [[cite:PUB00068557]].</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | ADP-ribosylation factor GTPase-activating protein; TAIR: AT5G61980.1 ARF-GAP domain 1; Swiss-Prot: sp|Q9FIT8|AGD1_ARATH ADP-ribosylation factor GTPase-activating protein AGD1; TrEMBL-Plants: tr|I1JXQ4|I1JXQ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0333600 | 37 | ||
| – | ADP-ribosylation factor GTPase-activating protein; TAIR: AT5G13300.1 ARF GTPase-activating protein; Swiss-Prot: sp|Q5W7F2|AGD3_ARATH ADP-ribosylation factor GTPase-activating protein AGD3; TrEMBL-Plants: tr|A0A151TCR5|A0A151TCR5_CAJCA ADP-ribosylation factor GTPase-activating protein AGD3; Found in the gene: LotjaGi1g1v0528600 | 37 | ||
| – | ADP-ribosylation factor GTPase-activating protein; TAIR: AT5G13300.1 ARF GTPase-activating protein; Swiss-Prot: sp|Q5W7F2|AGD3_ARATH ADP-ribosylation factor GTPase-activating protein AGD3; TrEMBL-Plants: tr|A0A151TCR5|A0A151TCR5_CAJCA ADP-ribosylation factor GTPase-activating protein AGD3; Found in the gene: LotjaGi1g1v0528600 | 37 | ||
| – | ADP-ribosylation factor GTPase-activating protein; TAIR: AT1G60860.1 ARF-GAP domain 2; Swiss-Prot: sp|Q9C6C3|AGD2_ARATH ADP-ribosylation factor GTPase-activating protein AGD2; TrEMBL-Plants: tr|K7LSS6|K7LSS6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0524900 | 35 | ||
| – | ADP-ribosylation factor GTPase-activating protein; TAIR: AT5G61980.1 ARF-GAP domain 1; Swiss-Prot: sp|Q9FIT8|AGD1_ARATH ADP-ribosylation factor GTPase-activating protein AGD1; TrEMBL-Plants: tr|G7LIT7|G7LIT7_MEDTR ADP-ribosylation factor GTPase-activating protein AGD10; Found in the gene: LotjaGi4g1v0421700 | 36 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 20.00 |