Domain Predictions — View

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PF16746

Source: Pfam

Description

BAR domain of APPL family

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 8

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0201789.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ADP-ribosylation factor GTPase-activating protein [Medicago truncatula] gi\|357520601\|ref\|XP_003630589.1\|	Domains G3DSA:1.20.1270.60 G3DSA:2.30.29.30 IPR001849 IPR011993 IPR027267 PF16746 PS50003 PTHR23180 PTHR23180:SF284 SSF103657 cd07606 mobidb-lite	12
Lj1g3v3137870.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD3-like [Glycine max] gi\|356523716\|ref\|XP_003530481.1\|	Domains Coil G3DSA:1.20.1270.60 G3DSA:1.25.40.20 G3DSA:2.30.29.30 IPR001164 IPR001849 IPR002110 IPR004148 IPR011993 IPR020683 IPR027267 PF00169 PF01412 PF13637 PF16746 PR00405 PS50003 PS50088 PS50115 PS50297 PTHR23180 PTHR23180:SF284 SM00105 SM00233 SM00248 SM00721 SSF103657 SSF48403 SSF50729 SSF57863 cd00204 cd07606 cd13250 mobidb-lite	34
Lj3g3v3500220.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD2-like [Glycine max] gi\|356544659\|ref\|XP_003540765.1\|	Domains G3DSA:1.20.1270.60 G3DSA:1.25.40.20 G3DSA:2.30.29.30 IPR001164 IPR001849 IPR002110 IPR004148 IPR011993 IPR020683 IPR027267 PF00169 PF01412 PF12796 PF16746 PR00405 PS50003 PS50088 PS50115 PS50297 PTHR23180 PTHR23180:SF244 SM00105 SM00233 SM00248 SM00721 SSF103657 SSF48403 SSF50729 SSF57863 cd00204 cd07606 cd13250	32
LotjaGi1g1v0333600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ADP-ribosylation factor GTPase-activating protein; TAIR: AT5G61980.1 ARF-GAP domain 1; Swiss-Prot: sp\|Q9FIT8\|AGD1_ARATH ADP-ribosylation factor GTPase-activating protein AGD1; TrEMBL-Plants: tr\|I1JXQ4\|I1JXQ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0333600	Domains Coil G3DSA:1.20.1270.60 G3DSA:1.25.40.20 G3DSA:3.30.40.160 IPR001164 IPR001849 IPR002110 IPR004148 IPR020683 IPR027267 IPR035670 IPR036770 IPR037278 IPR038508 PF00169 PF01412 PF12796 PF16746 PR00405 PS50003 PS50088 PS50115 PS50297 PTHR23180 PTHR23180:SF405 SM00105 SM00233 SM00248 SM00721 SSF103657 SSF48403 SSF50729 SSF57863 cd07606 cd08204 cd13250 mobidb-lite	37
LotjaGi1g1v0528600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ADP-ribosylation factor GTPase-activating protein; TAIR: AT5G13300.1 ARF GTPase-activating protein; Swiss-Prot: sp\|Q5W7F2\|AGD3_ARATH ADP-ribosylation factor GTPase-activating protein AGD3; TrEMBL-Plants: tr\|A0A151TCR5\|A0A151TCR5_CAJCA ADP-ribosylation factor GTPase-activating protein AGD3; Found in the gene: LotjaGi1g1v0528600	Domains Coil G3DSA:1.20.1270.60 G3DSA:1.25.40.20 G3DSA:3.30.40.160 IPR001164 IPR001849 IPR002110 IPR004148 IPR020683 IPR027267 IPR035670 IPR036770 IPR037278 IPR038508 PF00169 PF01412 PF13637 PF16746 PR00405 PS50003 PS50088 PS50115 PS50297 PTHR23180 PTHR23180:SF405 SM00105 SM00233 SM00248 SM00721 SSF103657 SSF48403 SSF50729 SSF57863 cd07606 cd08204 cd13250 mobidb-lite	37
LotjaGi1g1v0528600.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ADP-ribosylation factor GTPase-activating protein; TAIR: AT5G13300.1 ARF GTPase-activating protein; Swiss-Prot: sp\|Q5W7F2\|AGD3_ARATH ADP-ribosylation factor GTPase-activating protein AGD3; TrEMBL-Plants: tr\|A0A151TCR5\|A0A151TCR5_CAJCA ADP-ribosylation factor GTPase-activating protein AGD3; Found in the gene: LotjaGi1g1v0528600	Domains Coil G3DSA:1.20.1270.60 G3DSA:1.25.40.20 G3DSA:3.30.40.160 IPR001164 IPR001849 IPR002110 IPR004148 IPR020683 IPR027267 IPR035670 IPR036770 IPR037278 IPR038508 PF00169 PF01412 PF13857 PF16746 PR00405 PS50003 PS50088 PS50115 PS50297 PTHR23180 PTHR23180:SF405 SM00105 SM00233 SM00248 SM00721 SSF103657 SSF48403 SSF50729 SSF57863 cd07606 cd08204 cd13250 mobidb-lite	37
LotjaGi3g1v0524900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ADP-ribosylation factor GTPase-activating protein; TAIR: AT1G60860.1 ARF-GAP domain 2; Swiss-Prot: sp\|Q9C6C3\|AGD2_ARATH ADP-ribosylation factor GTPase-activating protein AGD2; TrEMBL-Plants: tr\|K7LSS6\|K7LSS6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0524900	Domains G3DSA:1.20.1270.60 G3DSA:1.25.40.20 G3DSA:3.30.40.160 IPR001164 IPR001849 IPR002110 IPR004148 IPR020683 IPR027267 IPR035670 IPR036770 IPR037278 IPR038508 PF00169 PF01412 PF12796 PF16746 PR00405 PS50003 PS50088 PS50115 PS50297 PTHR23180 PTHR23180:SF244 SM00105 SM00233 SM00248 SM00721 SSF103657 SSF48403 SSF50729 SSF57863 cd07606 cd08204 cd13250	35
LotjaGi4g1v0421700.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ADP-ribosylation factor GTPase-activating protein; TAIR: AT5G61980.1 ARF-GAP domain 1; Swiss-Prot: sp\|Q9FIT8\|AGD1_ARATH ADP-ribosylation factor GTPase-activating protein AGD1; TrEMBL-Plants: tr\|G7LIT7\|G7LIT7_MEDTR ADP-ribosylation factor GTPase-activating protein AGD10; Found in the gene: LotjaGi4g1v0421700	Domains G3DSA:1.20.1270.60 G3DSA:1.25.40.20 G3DSA:3.30.40.160 IPR001164 IPR001849 IPR002110 IPR004148 IPR020683 IPR027267 IPR035670 IPR036770 IPR037278 IPR038508 PF00169 PF01412 PF13637 PF16746 PR00405 PS50003 PS50088 PS50115 PS50297 PTHR23180 PTHR23180:SF406 SM00105 SM00233 SM00248 SM00721 SSF103657 SSF48403 SSF50729 SSF57863 cd07606 cd08204 cd13250 mobidb-lite	36

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	12.50