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GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | MRNA binding | Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | RNA binding protein, putative; TAIR: AT1G22330.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q9M1S3|ARP1_ARATH Probable RNA-binding protein ARP1; TrEMBL-Plants: tr|A0A0B2QWF0|A0A0B2QWF0_GLYSO RNA-binding protein 38; Found in the gene: LotjaGi1g1v0143900 | 13 | ||
| – | RNA binding protein, putative; TAIR: AT1G22330.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q9M1S3|ARP1_ARATH Probable RNA-binding protein ARP1; TrEMBL-Plants: tr|A0A0B2QWF0|A0A0B2QWF0_GLYSO RNA-binding protein 38; Found in the gene: LotjaGi1g1v0143900 | 13 | ||
| – | RNA-binding family protein, putative; TAIR: AT2G46780.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q76LC6|RBM24_DANRE RNA-binding protein 24; TrEMBL-Plants: tr|C6T8L2|C6T8L2_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0295300 | 12 | ||
| – | RNA-binding family protein, putative; TAIR: AT2G46780.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q76LC6|RBM24_DANRE RNA-binding protein 24; TrEMBL-Plants: tr|C6T8L2|C6T8L2_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0295300 | 12 | ||
| – | RNA-binding family protein, putative; TAIR: AT4G26650.2 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q8W034|RNP1_ARATH Heterogeneous nuclear ribonucleoprotein 1; TrEMBL-Plants: tr|I1K893|I1K893_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0363300 | 12 | ||
| – | RNA binding protein, putative; TAIR: AT1G76460.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q9M1S3|ARP1_ARATH Probable RNA-binding protein ARP1; TrEMBL-Plants: tr|I1K789|I1K789_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0569800 | 12 | ||
| – | RNA binding protein, putative; TAIR: AT1G76460.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q9M1S3|ARP1_ARATH Probable RNA-binding protein ARP1; TrEMBL-Plants: tr|A0A0B2QK00|A0A0B2QK00_GLYSO RNA-binding protein 24; Found in the gene: LotjaGi1g1v0569800 | 12 | ||
| – | RNA binding protein, putative; TAIR: AT1G76460.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q9M1S3|ARP1_ARATH Probable RNA-binding protein ARP1; TrEMBL-Plants: tr|A0A0B2QK00|A0A0B2QK00_GLYSO RNA-binding protein 24; Found in the gene: LotjaGi1g1v0569800 | 12 | ||
| – | RNA-binding family protein, putative; TAIR: AT2G46780.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q9M1S3|ARP1_ARATH Probable RNA-binding protein ARP1; TrEMBL-Plants: tr|V7APR5|V7APR5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0402300 | 12 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd12384 | CDD | 1 | 11.11 |