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cd12384

Source: CDD

Description

RRM_RBM24_RBM38_like

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 31

Transcript Name Description Predicted domains Domain count
Lj0g3v0343589.1
– PREDICTED: RNA-binding protein 38-like isoform X1 [Cicer arietinum] gi|502180082|ref|XP_004516562.1|
Domains
11
Lj1g3v1062540.1
– PREDICTED: RNA-binding protein 24-like [Cicer arietinum] gi|502136587|ref|XP_004502740.1|
Domains
10
Lj1g3v1062540.2
– PREDICTED: RNA-binding protein 24-like [Cicer arietinum] gi|502136587|ref|XP_004502740.1|
Domains
10
Lj1g3v3404350.1
– PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Glycine max] gi|356517913|ref|XP_003527630.1|
Domains
10
Lj1g3v4058470.1
– PREDICTED: poly(U)-binding-splicing factor PUF60-B-like isoform 1 [Glycine max] gi|356571847|ref|XP_003554083.1|
Domains
11
Lj1g3v4317470.1
– PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Cicer arietinum] gi|502109113|ref|XP_004493569.1|
Domains
10
Lj1g3v5061260.1
– PREDICTED: heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog [Glycine max] gi|356520186|ref|XP_003528745.1|
Domains
11
Lj1g3v5061260.2
– PREDICTED: heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog [Glycine max] gi|356520186|ref|XP_003528745.1|
Domains
11
Lj2g3v2986060.1
– Heterogeneous nuclear ribonucleoprotein D0 [Medicago truncatula] gi|357493687|ref|XP_003617132.1|
Domains
12
Lj3g3v0428500.1
– PREDICTED: polyadenylate-binding protein, cytoplasmic and nuclear-like [Glycine max] gi|356545259|ref|XP_003541062.1|
Domains
11
Lj3g3v2484120.1
– PREDICTED: RNA-binding protein 38-like [Cicer arietinum] gi|502170850|ref|XP_004514931.1|
Domains
10
Lj3g3v3752240.1
– PREDICTED: RNA-binding protein 38-like [Glycine max] gi|356544316|ref|XP_003540599.1|
Domains
10
Lj3g3v3752240.2
– RNA-binding family protein isoform 2, partial [Theobroma cacao] gi|508725030|gb|EOY16927.1|
Domains
10
Lj3g3v3752240.3
– RNA-binding family protein isoform 1 [Theobroma cacao] gi|508725029|gb|EOY16926.1|
Domains
10
Lj4g3v0506900.1
– PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like [Cicer arietinum] gi|502142875|ref|XP_004505137.1|
Domains
11
LotjaGi1g1v0055500.1
– RNA binding protein; TAIR: AT2G41060.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|O80678|UBA2B_ARATH UBP1-associated protein 2B; TrEMBL-Plants: tr|I1JIR8|I1JIR8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0055500
Domains
13
LotjaGi1g1v0143900.1
– RNA binding protein, putative; TAIR: AT1G22330.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q9M1S3|ARP1_ARATH Probable RNA-binding protein ARP1; TrEMBL-Plants: tr|A0A0B2QWF0|A0A0B2QWF0_GLYSO RNA-binding protein 38; Found in the gene: LotjaGi1g1v0143900
Domains
13
LotjaGi1g1v0143900.2
– RNA binding protein, putative; TAIR: AT1G22330.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q9M1S3|ARP1_ARATH Probable RNA-binding protein ARP1; TrEMBL-Plants: tr|A0A0B2QWF0|A0A0B2QWF0_GLYSO RNA-binding protein 38; Found in the gene: LotjaGi1g1v0143900
Domains
13
LotjaGi1g1v0295300.1
– RNA-binding family protein, putative; TAIR: AT2G46780.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q76LC6|RBM24_DANRE RNA-binding protein 24; TrEMBL-Plants: tr|C6T8L2|C6T8L2_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0295300
Domains
12
LotjaGi1g1v0295300.2
– RNA-binding family protein, putative; TAIR: AT2G46780.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q76LC6|RBM24_DANRE RNA-binding protein 24; TrEMBL-Plants: tr|C6T8L2|C6T8L2_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0295300
Domains
12
LotjaGi1g1v0569800.1
– RNA binding protein, putative; TAIR: AT1G76460.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q9M1S3|ARP1_ARATH Probable RNA-binding protein ARP1; TrEMBL-Plants: tr|I1K789|I1K789_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0569800
Domains
12
LotjaGi1g1v0569800.2
– RNA binding protein, putative; TAIR: AT1G76460.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q9M1S3|ARP1_ARATH Probable RNA-binding protein ARP1; TrEMBL-Plants: tr|A0A0B2QK00|A0A0B2QK00_GLYSO RNA-binding protein 24; Found in the gene: LotjaGi1g1v0569800
Domains
12
LotjaGi1g1v0569800.3
– RNA binding protein, putative; TAIR: AT1G76460.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q9M1S3|ARP1_ARATH Probable RNA-binding protein ARP1; TrEMBL-Plants: tr|A0A0B2QK00|A0A0B2QK00_GLYSO RNA-binding protein 24; Found in the gene: LotjaGi1g1v0569800
Domains
12
LotjaGi1g1v0654100.1
– RNA binding protein; TAIR: AT2G41060.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|O80678|UBA2B_ARATH UBP1-associated protein 2B; TrEMBL-Plants: tr|V7CUL8|V7CUL8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0654100
Domains
13
LotjaGi1g1v0654100.2
– RNA binding protein; TAIR: AT2G41060.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|O80678|UBA2B_ARATH UBP1-associated protein 2B; TrEMBL-Plants: tr|V7CUL8|V7CUL8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0654100
Domains
13
LotjaGi1g1v0725400.1
– RNA-binding family protein; TAIR: AT3G15010.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q9LKA4|UBA2C_ARATH UBP1-associated protein 2C; TrEMBL-Plants: tr|A0A0S3RXU6|A0A0S3RXU6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0725400
Domains
11
LotjaGi1g1v0798400.1
– RNA-binding protein; TAIR: AT3G54770.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q9M1S3|ARP1_ARATH Probable RNA-binding protein ARP1; TrEMBL-Plants: tr|A0A0L9VQ30|A0A0L9VQ30_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0798400
Domains
12
LotjaGi1g1v0798400.2
– RNA-binding protein; TAIR: AT3G54770.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q9M1S3|ARP1_ARATH Probable RNA-binding protein ARP1; TrEMBL-Plants: tr|A0A0L9VQ30|A0A0L9VQ30_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0798400
Domains
12
LotjaGi3g1v0042800.1
– RNA-binding family protein; TAIR: AT3G15010.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q9LKA4|UBA2C_ARATH UBP1-associated protein 2C; TrEMBL-Plants: tr|V7AHW3|V7AHW3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0042800
Domains
12
LotjaGi3g1v0402300.1
– RNA-binding family protein, putative; TAIR: AT2G46780.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q9M1S3|ARP1_ARATH Probable RNA-binding protein ARP1; TrEMBL-Plants: tr|V7APR5|V7APR5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0402300
Domains
12
LotjaGi4g1v0066600.1
– RNA-binding family protein; TAIR: AT3G15010.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q9LKA4|UBA2C_ARATH UBP1-associated protein 2C; TrEMBL-Plants: tr|G7JPR0|G7JPR0_MEDTR Heterogeneous nuclear ribonucleoprotein; Found in the gene: LotjaGi4g1v0066600
Domains
12

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 3.23