Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
IPR040107 is a U4/U6.U5 small nuclear ribonucleoprotein component Snu23.
<p>Pre-mRNA splicing is an important step in eukaryotic gene expression. Yeasts and humans share a common set of core spliceosomal proteins that are evolutionarily conserved such as B complex proteins Snu23 (known as ZMAT2 in humans), Prp38 and MFAP1 [[cite:PUB00062925], [cite:PUB00090272]]. This entry represents Snu23. Its structure has been revealed [[cite:PUB00090272], [cite:PUB00090527]].</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | MRNA splicing, via spliceosome | The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced. | ||
| Cellular component | Spliceosomal complex | Any of a series of ribonucleoprotein complexes that contain snRNA(s) and small nuclear ribonucleoproteins (snRNPs), and are formed sequentially during the spliceosomal splicing of one or more substrate RNAs, and which also contain the RNA substrate(s) from the initial target RNAs of splicing, the splicing intermediate RNA(s), to the final RNA products. During cis-splicing, the initial target RNA is a single, contiguous RNA transcript, whether mRNA, snoRNA, etc., and the released products are a spliced RNA and an excised intron, generally as a lariat structure. During trans-splicing, there are two initial substrate RNAs, the spliced leader RNA and a pre-mRNA. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Zinc finger matrin-type 2; TAIR: AT3G05760.1 C2H2 and C2HC zinc fingers superfamily protein; Swiss-Prot: sp|Q96NC0|ZMAT2_HUMAN Zinc finger matrin-type protein 2; TrEMBL-Plants: tr|I3SLF9|I3SLF9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0747900 | 11 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 100.00 |