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IPR040801 is a Ski2, N-terminal domain.
<p>This domain is the N-terminal extended region found in the Ski2 protein. Ski2 is the helicase component of the SKI complex, a multiprotein complex that assists the RNA-degrading exosome during the mRNA decay and quality-control pathways, required for the cytoplasmic functions of the exosome, including RNA turnover, surveillance, and interference [[cite:PUB00074525], [cite:PUB00089517], [cite:PUB00151108], [cite:PUB00151109]]. Ski2, Ski3, and Ski8 assemble in a tetramer with 1:1:2 stoichiometry.</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | ATP-dependent RNA helicase family protein; TAIR: AT3G46960.2 RNA helicase, ATP-dependent, SK12/DOB1 protein; Swiss-Prot: sp|F4JAA5|SKI2_ARATH DExH-box ATP-dependent RNA helicase DExH11; TrEMBL-Plants: tr|I1N032|I1N032_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0134200 | 28 | ||
| – | ATP-dependent RNA helicase family protein; TAIR: AT3G46960.1 RNA helicase, ATP-dependent, SK12/DOB1 protein; Swiss-Prot: sp|F4JAA5|SKI2_ARATH DExH-box ATP-dependent RNA helicase DExH11; TrEMBL-Plants: tr|I1N032|I1N032_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0134200 | 28 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 50.00 |