Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

MF_00118_A

Source: Hamap

Description

Elongation factor Tu [tuf].

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0003746 View details of GO:0003746 AmiGO InterPro QuickGO	Molecular function	Translation elongation factor activity	Functions in chain elongation during polypeptide synthesis at the ribosome.	Subterm of GO:0008135
GO:0005525 View details of GO:0005525 AmiGO InterPro QuickGO	Molecular function	GTP binding	Interacting selectively and non-covalently with GTP, guanosine triphosphate.	Subterm of GO:0032550 GO:0032561 GO:0035639
GO:0006414 View details of GO:0006414 AmiGO InterPro QuickGO	Biological process	Translational elongation	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis.	Subterm of GO:0034645 Part of GO:0006412

Associated Lotus transcripts 14

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v3690420.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: elongation factor 1-alpha-like isoform 1 [Glycine max] gi\|356558807\|ref\|XP_003547694.1\|	Domains G3DSA:2.40.30.10 G3DSA:3.40.50.300 IPR000795 IPR004160 IPR004161 IPR004539 IPR009000 IPR009001 IPR027417 IPR031157 MF_00118_A PF00009 PF03143 PF03144 PR00315 PS00301 PS51722 PTHR23115 PTHR23115:SF157 SSF50447 SSF50465 SSF52540 TIGR00483 cd01883 cd03693 cd03705	26
Lj2g3v0237250.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: elongation factor 1-alpha-like [Cicer arietinum] gi\|502091438\|ref\|XP_004489551.1\|	Domains G3DSA:2.40.30.10 G3DSA:3.40.50.300 IPR000795 IPR004160 IPR004161 IPR004539 IPR009000 IPR009001 IPR027417 IPR031157 MF_00118_A PF00009 PF03143 PF03144 PR00315 PS00301 PS51722 PTHR23115 PTHR23115:SF157 SSF50447 SSF50465 SSF52540 TIGR00483 cd01883 cd03693 cd03705	26
Lj5g3v1699430.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: elongation factor 1-alpha-like isoform 1 [Glycine max] gi\|356558807\|ref\|XP_003547694.1\|	Domains G3DSA:2.40.30.10 G3DSA:3.40.50.300 IPR000795 IPR004160 IPR004161 IPR004539 IPR009000 IPR009001 IPR027417 IPR031157 MF_00118_A PF00009 PF03143 PF03144 PR00315 PS00301 PS51722 PTHR23115 PTHR23115:SF157 SSF50447 SSF50465 SSF52540 TIGR00483 cd01883 cd03693 cd03705	26
LotjaGi1g1v0614400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor 1-alpha; TAIR: AT1G07920.1 GTP binding Elongation factor Tu family protein; Swiss-Prot: sp\|O24534\|EF1A_VICFA Elongation factor 1-alpha; TrEMBL-Plants: tr\|A0A0R0FM97\|A0A0R0FM97_SOYBN Elongation factor 1-alpha; Found in the gene: LotjaGi1g1v0614400	Domains G3DSA:2.40.30.10 G3DSA:3.40.50.300 IPR000795 IPR004160 IPR004161 IPR004539 IPR009000 IPR009001 IPR027417 IPR031157 MF_00118_A PF00009 PF03143 PF03144 PR00315 PS00301 PS51722 PTHR23115 PTHR23115:SF257 SSF50447 SSF50465 SSF52540 TIGR00483 cd01883 cd03693 cd03705	26
LotjaGi1g1v0614400.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor 1-alpha; TAIR: AT1G07920.1 GTP binding Elongation factor Tu family protein; Swiss-Prot: sp\|O24534\|EF1A_VICFA Elongation factor 1-alpha; TrEMBL-Plants: tr\|A0A0R0FM97\|A0A0R0FM97_SOYBN Elongation factor 1-alpha; Found in the gene: LotjaGi1g1v0614400	Domains G3DSA:2.40.30.10 G3DSA:3.40.50.300 IPR000795 IPR004160 IPR004161 IPR004539 IPR009000 IPR009001 IPR027417 IPR031157 MF_00118_A PF00009 PF03143 PF03144 PR00315 PS00301 PS51722 PTHR23115 PTHR23115:SF257 SSF50447 SSF50465 SSF52540 TIGR00483 cd01883 cd03693 cd03705	26
LotjaGi1g1v0614400.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor 1-alpha; TAIR: AT1G07920.1 GTP binding Elongation factor Tu family protein; Swiss-Prot: sp\|O24534\|EF1A_VICFA Elongation factor 1-alpha; TrEMBL-Plants: tr\|A0A0R0FM97\|A0A0R0FM97_SOYBN Elongation factor 1-alpha; Found in the gene: LotjaGi1g1v0614400	Domains G3DSA:2.40.30.10 G3DSA:3.40.50.300 IPR000795 IPR004160 IPR004161 IPR004539 IPR009000 IPR009001 IPR027417 IPR031157 MF_00118_A PF00009 PF03143 PF03144 PR00315 PS00301 PS51722 PTHR23115 PTHR23115:SF257 SSF50447 SSF50465 SSF52540 TIGR00483 cd01883 cd03693 cd03705	26
LotjaGi2g1v0077000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor 1-alpha; TAIR: AT1G07920.1 GTP binding Elongation factor Tu family protein; Swiss-Prot: sp\|O49169\|EF1A_MANES Elongation factor 1-alpha; TrEMBL-Plants: tr\|B9SPV9\|B9SPV9_RICCO Elongation factor 1-alpha; Found in the gene: LotjaGi2g1v0077000	Domains G3DSA:2.40.30.10 G3DSA:3.40.50.300 IPR000795 IPR004160 IPR004161 IPR004539 IPR009000 IPR009001 IPR027417 IPR031157 MF_00118_A PF00009 PF03143 PF03144 PR00315 PS00301 PS51722 PTHR23115 PTHR23115:SF253 PTHR23115:SF257 SSF50447 SSF50465 SSF52540 TIGR00483 cd01883 cd03693 cd03705	27
LotjaGi2g1v0077000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor 1-alpha; TAIR: AT1G07920.1 GTP binding Elongation factor Tu family protein; Swiss-Prot: sp\|O49169\|EF1A_MANES Elongation factor 1-alpha; TrEMBL-Plants: tr\|B9SPV9\|B9SPV9_RICCO Elongation factor 1-alpha; Found in the gene: LotjaGi2g1v0077000	Domains G3DSA:2.40.30.10 G3DSA:3.40.50.300 IPR000795 IPR004160 IPR004161 IPR004539 IPR009000 IPR009001 IPR027417 IPR031157 MF_00118_A PF00009 PF03143 PF03144 PR00315 PS00301 PS51722 PTHR23115 PTHR23115:SF253 PTHR23115:SF257 SSF50447 SSF50465 SSF52540 TIGR00483 cd01883 cd03693 cd03705	27
LotjaGi2g1v0077000.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor 1-alpha; TAIR: AT1G07920.1 GTP binding Elongation factor Tu family protein; Swiss-Prot: sp\|O49169\|EF1A_MANES Elongation factor 1-alpha; TrEMBL-Plants: tr\|B9SPV9\|B9SPV9_RICCO Elongation factor 1-alpha; Found in the gene: LotjaGi2g1v0077000	Domains G3DSA:2.40.30.10 G3DSA:3.40.50.300 IPR000795 IPR004160 IPR004161 IPR004539 IPR009000 IPR009001 IPR027417 IPR031157 MF_00118_A PF00009 PF03143 PF03144 PR00315 PS00301 PS51722 PTHR23115 PTHR23115:SF253 SSF50447 SSF50465 SSF52540 TIGR00483 cd01883 cd03693 cd03705	26
LotjaGi2g1v0101200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor 1-alpha; TAIR: AT1G07920.1 GTP binding Elongation factor Tu family protein; Swiss-Prot: sp\|O64937\|EF1A_ORYSJ Elongation factor 1-alpha; TrEMBL-Plants: tr\|A0A1J7HKW6\|A0A1J7HKW6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0101200	Domains G3DSA:2.40.30.10 G3DSA:3.40.50.300 IPR000795 IPR004160 IPR004161 IPR004539 IPR009000 IPR009001 IPR027417 IPR031157 MF_00118_A PF00009 PF03143 PF03144 PR00315 PS00301 PS51722 PTHR23115 PTHR23115:SF257 SSF50447 SSF50465 SSF52540 TIGR00483 cd01883 cd03693 cd03705	26
LotjaGi2g1v0101200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor 1-alpha; TAIR: AT1G07920.1 GTP binding Elongation factor Tu family protein; Swiss-Prot: sp\|O64937\|EF1A_ORYSJ Elongation factor 1-alpha; TrEMBL-Plants: tr\|A0A1J7HKW6\|A0A1J7HKW6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0101200	Domains G3DSA:2.40.30.10 G3DSA:3.40.50.300 IPR000795 IPR004160 IPR004161 IPR004539 IPR009000 IPR009001 IPR027417 IPR031157 MF_00118_A PF00009 PF03143 PF03144 PR00315 PS00301 PS51722 PTHR23115 PTHR23115:SF257 SSF50447 SSF50465 SSF52540 TIGR00483 cd01883 cd03693 cd03705	26
LotjaGi5g1v0263900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor 1-alpha; TAIR: AT1G07920.1 GTP binding Elongation factor Tu family protein; Swiss-Prot: sp\|P43643\|EF1A_TOBAC Elongation factor 1-alpha; TrEMBL-Plants: tr\|A0A0L9VMG2\|A0A0L9VMG2_PHAAN Elongation factor 1-alpha; Found in the gene: LotjaGi5g1v0263900	Domains G3DSA:2.40.30.10 G3DSA:3.40.50.300 IPR000795 IPR004160 IPR004161 IPR004539 IPR009000 IPR009001 IPR027417 IPR031157 MF_00118_A PF00009 PF03143 PF03144 PR00315 PS00301 PS51722 PTHR23115 PTHR23115:SF253 SSF50447 SSF50465 SSF52540 TIGR00483 cd01883 cd03693 cd03705	26
LotjaGi5g1v0277100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor 1-alpha; TAIR: AT1G07920.1 GTP binding Elongation factor Tu family protein; Swiss-Prot: sp\|O64937\|EF1A_ORYSJ Elongation factor 1-alpha; TrEMBL-Plants: tr\|A0A1J7I5T3\|A0A1J7I5T3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0277100	Domains G3DSA:2.40.30.10 G3DSA:3.40.50.300 IPR000795 IPR004160 IPR004161 IPR004539 IPR009000 IPR009001 IPR027417 IPR031157 MF_00118_A PF00009 PF03143 PF03144 PR00315 PS00301 PS51722 PTHR23115 PTHR23115:SF253 SSF50447 SSF50465 SSF52540 TIGR00483 cd01883 cd03693 cd03705	26
LotjaGi5g1v0277100.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor 1-alpha; TAIR: AT1G07920.1 GTP binding Elongation factor Tu family protein; Swiss-Prot: sp\|O64937\|EF1A_ORYSJ Elongation factor 1-alpha; TrEMBL-Plants: tr\|A0A1J7I5T3\|A0A1J7I5T3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0277100	Domains G3DSA:2.40.30.10 G3DSA:3.40.50.300 IPR000795 IPR004160 IPR004161 IPR004539 IPR009000 IPR009001 IPR027417 IPR031157 MF_00118_A PF00009 PF03143 PF03144 PR00315 PS00301 PS51722 PTHR23115 PTHR23115:SF253 SSF50447 SSF50465 SSF52540 TIGR00483 cd01883 cd03693 cd03705	26

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd03705	CDD	1	7.14