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PF01287

Source: Pfam

Description

Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003723
Molecular function RNA binding Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
Subterm of
GO:0003746
Molecular function Translation elongation factor activity Functions in chain elongation during polypeptide synthesis at the ribosome.
Subterm of
GO:0043022
Molecular function Ribosome binding Interacting selectively and non-covalently with any part of a ribosome.
Subterm of
GO:0045901
Biological process Positive regulation of translational elongation Any process that activates or increases the frequency, rate or extent of translational elongation.
Subterm of
Positively regulates
GO:0045905
Biological process Positive regulation of translational termination Any process that activates or increases the frequency, rate or extent of translational termination.
Subterm of
Positively regulates

Associated Lotus transcripts 9

Transcript Name Description Predicted domains Domain count
Lj1g3v0536740.1
– Eukaryotic translation initiation factor 5A3 [Glycine max] gi|351721220|ref|NP_001237458.1|
Domains
19
Lj4g3v1683090.1
– PREDICTED: eukaryotic translation initiation factor 5A-4-like [Cicer arietinum] gi|502126980|ref|XP_004499516.1|
Domains
19
Lj4g3v1983490.1
– PREDICTED: eukaryotic translation initiation factor 5A-2-like [Cicer arietinum] gi|502149980|ref|XP_004507734.1|
Domains
19
LotjaGi1g1v0193500.1
– Eukaryotic translation initiation factor 5A; TAIR: AT1G69410.1 eukaryotic elongation factor 5A-3; Swiss-Prot: sp|P24922|IF5A2_NICPL Eukaryotic translation initiation factor 5A-2; TrEMBL-Plants: tr|I3SDR1|I3SDR1_LOTJA Eukaryotic translation initiation factor 5A; Found in the gene: LotjaGi1g1v0193500
Domains
19
LotjaGi2g1v0299200.1
– Eukaryotic translation initiation factor 5A; TAIR: AT1G13950.1 eukaryotic elongation factor 5A-1; Swiss-Prot: sp|Q945F4|IF5A2_MEDSA Eukaryotic translation initiation factor 5A-2; TrEMBL-Plants: tr|I3T1J7|I3T1J7_LOTJA Eukaryotic translation initiation factor 5A; Found in the gene: LotjaGi2g1v0299200
Domains
19
LotjaGi4g1v0252100.3
– Eukaryotic translation initiation factor 5A; TAIR: AT1G13950.1 eukaryotic elongation factor 5A-1; Swiss-Prot: sp|Q9AXQ4|IF5A3_SOLLC Eukaryotic translation initiation factor 5A-3; TrEMBL-Plants: tr|I3SPM6|I3SPM6_LOTJA Eukaryotic translation initiation factor 5A; Found in the gene: LotjaGi4g1v0252100
Domains
18
LotjaGi4g1v0252100.4
– Eukaryotic translation initiation factor 5A; TAIR: AT1G13950.1 eukaryotic elongation factor 5A-1; Swiss-Prot: sp|P56336|IF5A4_SOLTU Eukaryotic translation initiation factor 5A-4; TrEMBL-Plants: tr|I3SPM6|I3SPM6_LOTJA Eukaryotic translation initiation factor 5A; Found in the gene: LotjaGi4g1v0252100
Domains
19
LotjaGi4g1v0287700.1
– Eukaryotic translation initiation factor 5A; TAIR: AT2G24230.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|C0LGK9|Y2242_ARATH Probable LRR receptor-like serine/threonine-protein kinase At2g24230; TrEMBL-Plants: tr|A0A0R0FIA7|A0A0R0FIA7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0287700
Domains
32
LotjaGi4g1v0287700.3
– Eukaryotic translation initiation factor 5A; TAIR: AT1G13950.1 eukaryotic elongation factor 5A-1; Swiss-Prot: sp|Q945F4|IF5A2_MEDSA Eukaryotic translation initiation factor 5A-2; TrEMBL-Plants: tr|I1JGP5|I1JGP5_SOYBN Eukaryotic translation initiation factor 5A; Found in the gene: LotjaGi4g1v0287700
Domains
19

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 11.11