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Patched family
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Niemann-Pick C1 protein [Medicago truncatula] gi|357495641|ref|XP_003618109.1| | 12 | ||
| – | PREDICTED: niemann-Pick C1 protein-like [Glycine max] gi|356509590|ref|XP_003523530.1| | 9 | ||
| – | PREDICTED: niemann-Pick C1 protein-like [Glycine max] gi|356509590|ref|XP_003523530.1| | 22 | ||
| – | PREDICTED: niemann-Pick C1 protein-like [Glycine max] gi|356553425|ref|XP_003545057.1| | 13 | ||
| – | Niemann-Pick C1 protein; TAIR: AT4G38350.1 Patched family protein; Swiss-Prot: sp|O35604|NPC1_MOUSE Niemann-Pick C1 protein; TrEMBL-Plants: tr|A0A0R0G729|A0A0R0G729_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0001400 | 21 | ||
| – | Niemann-Pick C1 protein; TAIR: AT4G38350.1 Patched family protein; Swiss-Prot: sp|O35604|NPC1_MOUSE Niemann-Pick C1 protein; TrEMBL-Plants: tr|A0A0B2RDB9|A0A0B2RDB9_GLYSO Protein DETOXIFICATION; Found in the gene: LotjaGi1g1v0001400 | 15 | ||
| – | Niemann-Pick C1 protein; TAIR: AT4G38350.1 Patched family protein; Swiss-Prot: sp|O35604|NPC1_MOUSE Niemann-Pick C1 protein; TrEMBL-Plants: tr|A0A0B2RDB9|A0A0B2RDB9_GLYSO Protein DETOXIFICATION; Found in the gene: LotjaGi1g1v0001400 | 13 | ||
| – | Niemann-Pick C1 protein; TAIR: AT4G38350.1 Patched family protein; Swiss-Prot: sp|P56941|NPC1_PIG Niemann-Pick C1 protein; TrEMBL-Plants: tr|A0A0R0G729|A0A0R0G729_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0001400 | 15 | ||
| – | Niemann-Pick C1 protein; TAIR: AT4G38350.1 Patched family protein; Swiss-Prot: sp|O35604|NPC1_MOUSE Niemann-Pick C1 protein; TrEMBL-Plants: tr|A0A0R0G729|A0A0R0G729_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0001400 | 15 | ||
| – | Niemann-Pick C1 protein; TAIR: AT4G38350.1 Patched family protein; Swiss-Prot: sp|O35604|NPC1_MOUSE Niemann-Pick C1 protein; TrEMBL-Plants: tr|A0A0R0G729|A0A0R0G729_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0001400 | 16 | ||
| – | Niemann-Pick C1 protein; TAIR: AT4G38350.1 Patched family protein; Swiss-Prot: sp|O35604|NPC1_MOUSE Niemann-Pick C1 protein; TrEMBL-Plants: tr|A0A0R0G729|A0A0R0G729_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0001400 | 16 | ||
| – | Niemann-Pick C1 protein; TAIR: AT1G42470.1 Patched family protein; Swiss-Prot: sp|P56941|NPC1_PIG Niemann-Pick C1 protein; TrEMBL-Plants: tr|A0A0B2RND6|A0A0B2RND6_GLYSO Niemann-Pick C1 protein; Found in the gene: LotjaGi1g1v0436400 | 21 | ||
| – | Niemann-Pick C1 protein; TAIR: AT1G42470.1 Patched family protein; Swiss-Prot: sp|P56941|NPC1_PIG Niemann-Pick C1 protein; TrEMBL-Plants: tr|K7KHM4|K7KHM4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0436400 | 18 | ||
| – | Niemann-Pick C1 protein; TAIR: AT1G42470.1 Patched family protein; Swiss-Prot: sp|P56941|NPC1_PIG Niemann-Pick C1 protein; TrEMBL-Plants: tr|K7KHM4|K7KHM4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0436400 | 21 | ||
| – | Niemann-Pick C1 protein; TAIR: AT1G42470.1 Patched family protein; Swiss-Prot: sp|P56941|NPC1_PIG Niemann-Pick C1 protein; TrEMBL-Plants: tr|K7KHM4|K7KHM4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0436400 | 18 | ||
| – | Niemann-Pick C1 protein; TAIR: AT1G42470.1 Patched family protein; Swiss-Prot: sp|P56941|NPC1_PIG Niemann-Pick C1 protein; TrEMBL-Plants: tr|A0A0B2RND6|A0A0B2RND6_GLYSO Niemann-Pick C1 protein; Found in the gene: LotjaGi1g1v0436400 | 16 | ||
| – | Niemann-Pick C1 protein; TAIR: AT1G42470.1 Patched family protein; Swiss-Prot: sp|P56941|NPC1_PIG Niemann-Pick C1 protein; TrEMBL-Plants: tr|K7KHM4|K7KHM4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0436400 | 18 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| TRANSMEMBRANE | Phobius | 1 | 5.88 |