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PF02735

Source: Pfam

Description

Ku70/Ku80 beta-barrel domain

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of
GO:0006303
Biological process Double-strand break repair via nonhomologous end joining The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends. This term covers instances of separate pathways, called classical (or canonical) and alternative nonhomologous end joining (C-NHEJ and A-NHEJ). These in turn may further branch into sub-pathways, but evidence is still unclear.
Subterm of

Associated Lotus transcripts 5

Transcript Name Description Predicted domains Domain count
Lj3g3v2735120.1
– PREDICTED: ATP-dependent DNA helicase 2 subunit KU80-like isoform X1 [Cicer arietinum] gi|502146520|ref|XP_004506489.1|
Domains
28
Lj5g3v2302940.1
– PREDICTED: ATP-dependent DNA helicase 2 subunit KU70-like [Glycine max] gi|356576925|ref|XP_003556580.1|
Domains
28
LotjaGi3g1v0433200.1
– ATP-dependent DNA helicase 2 subunit KU80; TAIR: AT1G48050.1 Ku80 family protein; Swiss-Prot: sp|Q9FQ09|KU80_ARATH ATP-dependent DNA helicase 2 subunit KU80; TrEMBL-Plants: tr|G7JDE1|G7JDE1_MEDTR ATP-dependent DNA helicase 2 subunit KU80; Found in the gene: LotjaGi3g1v0433200
Domains
29
LotjaGi3g1v0433200.2
– ATP-dependent DNA helicase 2 subunit KU80; TAIR: AT1G48050.1 Ku80 family protein; Swiss-Prot: sp|Q9FQ09|KU80_ARATH ATP-dependent DNA helicase 2 subunit KU80; TrEMBL-Plants: tr|G7JDE1|G7JDE1_MEDTR ATP-dependent DNA helicase 2 subunit KU80; Found in the gene: LotjaGi3g1v0433200
Domains
29
LotjaGi5g1v0365500.1
– ATP-dependent DNA helicase 2 subunit Ku70; TAIR: AT1G16970.1 ATP-dependent DNA helicase 2 subunit Ku70-like protein; Swiss-Prot: sp|Q9FQ08|KU70_ARATH ATP-dependent DNA helicase 2 subunit KU70; TrEMBL-Plants: tr|K7N5J8|K7N5J8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0365500
Domains
30

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd01458 CDD 1 20.00