Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PF02787

Source: Pfam

Description

Carbamoyl-phosphate synthetase large chain, oligomerisation domain

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 2

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0077959.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Carbamoyl-phosphate synthase large chain [Medicago truncatula] gi\|357453751\|ref\|XP_003597156.1\|	Domains G3DSA:1.10.1030.10 G3DSA:3.30.1490.20 G3DSA:3.30.470.20 G3DSA:3.40.50.1380 G3DSA:3.40.50.20 IPR005479 IPR005480 IPR005483 IPR006275 IPR011607 IPR011761 IPR013815 IPR013816 IPR016185 IPR033937 PF02142 PF02786 PF02787 PR00098 PS00866 PS00867 PS50975 PTHR11405 PTHR11405:SF47 SM00851 SM01096 SSF48108 SSF52335 SSF52440 SSF56059 TIGR01369 cd01424	32
LotjaGi3g1v0161000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Carbamoyl-phosphate synthase large chain; TAIR: AT1G29900.1 carbamoyl phosphate synthetase B; Swiss-Prot: sp\|Q42601\|CARB_ARATH Carbamoyl-phosphate synthase large chain, chloroplastic; TrEMBL-Plants: tr\|G7IU57\|G7IU57_MEDTR Carbamoyl-phosphate synthase large chain; Found in the gene: LotjaGi3g1v0161000	Domains Coil G3DSA:1.10.1030.10 G3DSA:3.30.470.20 G3DSA:3.40.50.1380 G3DSA:3.40.50.20 IPR005479 IPR005480 IPR005483 IPR006275 IPR011607 IPR011761 IPR016185 IPR033937 IPR036897 IPR036914 MF_01210_A MF_01210_B PF02142 PF02786 PF02787 PR00098 PS00866 PS00867 PS50975 PS51855 PTHR11405 PTHR11405:SF5 SM00851 SM01096 SSF48108 SSF52335 SSF52440 SSF56059 TIGR01369 cd01424 mobidb-lite	36

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	50.00