Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PTHR11405

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 11

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0077959.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Carbamoyl-phosphate synthase large chain [Medicago truncatula] gi\|357453751\|ref\|XP_003597156.1\|	Domains G3DSA:1.10.1030.10 G3DSA:3.30.1490.20 G3DSA:3.30.470.20 G3DSA:3.40.50.1380 G3DSA:3.40.50.20 IPR005479 IPR005480 IPR005483 IPR006275 IPR011607 IPR011761 IPR013815 IPR013816 IPR016185 IPR033937 PF02142 PF02786 PF02787 PR00098 PS00866 PS00867 PS50975 PTHR11405 PTHR11405:SF47 SM00851 SM01096 SSF48108 SSF52335 SSF52440 SSF56059 TIGR01369 cd01424	32
Lj1g3v1276960.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Carbamoyl-phosphate synthase small chain [Medicago truncatula] gi\|357477161\|ref\|XP_003608866.1\|	Domains G3DSA:3.40.50.880 IPR017926 IPR029062 PF00117 PR00096 PR00097 PR00099 PS51273 PTHR11405 SSF52317 SignalP-noTM_EUK cd01744	12
Lj1g3v1276960.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Carbamoyl-phosphate synthase small chain [Medicago truncatula] gi\|357477159\|ref\|XP_003608865.1\|	Domains G3DSA:3.40.50.880 G3DSA:3.50.30.20 IPR002474 IPR006274 IPR017926 IPR029062 PF00117 PF00988 PR00096 PR00097 PR00099 PS51273 PTHR11405 PTHR11405:SF37 SM01097 SSF52021 SSF52317 TIGR01368 cd01744	19
Lj1g3v2126090.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: ornithine carbamoyltransferase, chloroplastic-like [Glycine max] gi\|356510161\|ref\|XP_003523808.1\|	Domains G3DSA:3.40.50.1370 IPR002292 IPR006130 IPR006131 IPR006132 IPR024904 MF_01109 PF00185 PF02729 PR00100 PR00102 PTHR11405 SSF53671 TIGR00658	14
Lj2g3v3188480.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: aspartate carbamoyltransferase 1, chloroplastic-like [Glycine max] gi\|356501558\|ref\|XP_003519591.1\|	Domains G3DSA:3.40.50.1370 IPR002082 IPR006130 IPR006131 IPR006132 MF_00001 NON_CYTOPLASMIC_DOMAIN PF00185 PF02729 PR00100 PR00101 PS00097 PTHR11405 PTHR11405:SF16 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53671 SignalP-TM_GRAM_POSITIVE TIGR00670	21
Lj5g3v0108330.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ornithine carbamoyltransferase [Canavalia lineata] gi\|6578122\|gb\|AAF17704.1\|AF033561_1	Domains G3DSA:3.40.50.1370 IPR006130 IPR006131 PF00185 PR00100 PTHR11405 PTHR11405:SF1 SSF53671	8
LotjaGi1g1v0025700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Aspartate carbamoyltransferase; TAIR: AT3G20330.1 PYRIMIDINE B; Swiss-Prot: sp\|Q43086\|PYRB1_PEA Aspartate carbamoyltransferase 1, chloroplastic; TrEMBL-Plants: tr\|I1JJC4\|I1JJC4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0025700	Domains G3DSA:3.40.50.1370 IPR002082 IPR006130 IPR006131 IPR006132 IPR036901 MF_00001 NON_CYTOPLASMIC_DOMAIN PF00185 PF02729 PR00100 PR00101 PS00097 PTHR11405 PTHR11405:SF52 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53671 SignalP-TM TIGR00670	22
LotjaGi1g1v0025700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Aspartate carbamoyltransferase; TAIR: AT3G20330.1 PYRIMIDINE B; Swiss-Prot: sp\|Q43086\|PYRB1_PEA Aspartate carbamoyltransferase 1, chloroplastic; TrEMBL-Plants: tr\|I1JJC4\|I1JJC4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0025700	Domains G3DSA:3.40.50.1370 IPR002082 IPR006130 IPR006131 IPR006132 IPR036901 MF_00001 PF00185 PF02729 PR00100 PR00101 PS00097 PTHR11405 PTHR11405:SF52 SSF53671 TIGR00670	16
LotjaGi1g1v0025700.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Aspartate carbamoyltransferase; TAIR: AT3G20330.1 PYRIMIDINE B; Swiss-Prot: sp\|Q43086\|PYRB1_PEA Aspartate carbamoyltransferase 1, chloroplastic; TrEMBL-Plants: tr\|I1JJC4\|I1JJC4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0025700	Domains G3DSA:3.40.50.1370 IPR002082 IPR006130 IPR006131 IPR006132 IPR036901 MF_00001 NON_CYTOPLASMIC_DOMAIN PF00185 PF02729 PR00100 PR00101 PS00097 PTHR11405 PTHR11405:SF52 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53671 SignalP-TM TIGR00670	22
LotjaGi1g1v0315900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Carbamoyl-phosphate synthase small chain; TAIR: AT3G27740.1 carbamoyl phosphate synthetase A; Swiss-Prot: sp\|Q9LVW7\|CARA_ARATH Carbamoyl-phosphate synthase small chain, chloroplastic; TrEMBL-Plants: tr\|I3SBA2\|I3SBA2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0315900	Domains G3DSA:3.40.50.880 G3DSA:3.50.30.20 IPR002474 IPR006274 IPR017926 IPR029062 IPR035686 IPR036480 MF_01209 PF00117 PF00988 PR00096 PR00097 PR00099 PS51273 PTHR11405 PTHR11405:SF4 SM01097 SSF52021 SSF52317 TIGR01368 cd01744	22
LotjaGi3g1v0161000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Carbamoyl-phosphate synthase large chain; TAIR: AT1G29900.1 carbamoyl phosphate synthetase B; Swiss-Prot: sp\|Q42601\|CARB_ARATH Carbamoyl-phosphate synthase large chain, chloroplastic; TrEMBL-Plants: tr\|G7IU57\|G7IU57_MEDTR Carbamoyl-phosphate synthase large chain; Found in the gene: LotjaGi3g1v0161000	Domains Coil G3DSA:1.10.1030.10 G3DSA:3.30.470.20 G3DSA:3.40.50.1380 G3DSA:3.40.50.20 IPR005479 IPR005480 IPR005483 IPR006275 IPR011607 IPR011761 IPR016185 IPR033937 IPR036897 IPR036914 MF_01210_A MF_01210_B PF02142 PF02786 PF02787 PR00098 PS00866 PS00867 PS50975 PS51855 PTHR11405 PTHR11405:SF5 SM00851 SM01096 SSF48108 SSF52335 SSF52440 SSF56059 TIGR01369 cd01424 mobidb-lite	36

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	9.09