Domain Predictions — View

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SSF52335

Source: SUPERFAMILY

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 8

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0077959.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Carbamoyl-phosphate synthase large chain [Medicago truncatula] gi\|357453751\|ref\|XP_003597156.1\|	Domains G3DSA:1.10.1030.10 G3DSA:3.30.1490.20 G3DSA:3.30.470.20 G3DSA:3.40.50.1380 G3DSA:3.40.50.20 IPR005479 IPR005480 IPR005483 IPR006275 IPR011607 IPR011761 IPR013815 IPR013816 IPR016185 IPR033937 PF02142 PF02786 PF02787 PR00098 PS00866 PS00867 PS50975 PTHR11405 PTHR11405:SF47 SM00851 SM01096 SSF48108 SSF52335 SSF52440 SSF56059 TIGR01369 cd01424	32
Lj0g3v0249449.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: bifunctional purine biosynthesis protein PurH-like [Glycine max] gi\|356508292\|ref\|XP_003522892.1\|	Domains G3DSA:3.40.140.20 G3DSA:3.40.50.1380 IPR002695 IPR011607 IPR016193 IPR024051 MF_00139 NON_CYTOPLASMIC_DOMAIN PF01808 PF02142 PIRSF000414 PTHR11692 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00798 SM00851 SSF52335 SSF53927 TIGR00355 cd01421	22
Lj0g3v0249449.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: bifunctional purine biosynthesis protein PurH-like [Glycine max] gi\|356508292\|ref\|XP_003522892.1\|	Domains G3DSA:3.40.140.20 G3DSA:3.40.50.1380 IPR002695 IPR011607 IPR016193 IPR024051 MF_00139 NON_CYTOPLASMIC_DOMAIN PF01808 PF02142 PIRSF000414 PTHR11692 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00798 SM00851 SSF52335 SSF53927 TIGR00355 cd01421	22
LotjaGi3g1v0107300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Bifunctional purine biosynthesis protein PurH; TAIR: AT2G35040.1 AICARFT/IMPCHase bienzyme family protein; Swiss-Prot: sp\|Q0AW31\|PUR9_SYNWW Bifunctional purine biosynthesis protein PurH; TrEMBL-Plants: tr\|A0A151RCA3\|A0A151RCA3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0107300	Domains G3DSA:3.40.140.20 G3DSA:3.40.50.1380 IPR002695 IPR011607 IPR016193 IPR024051 IPR036914 MF_00139 NON_CYTOPLASMIC_DOMAIN PF01808 PF02142 PIRSF000414 PS51855 PTHR11692 PTHR11692:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00798 SM00851 SSF52335 SSF53927 TIGR00355 cd01421	25
LotjaGi3g1v0107300.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Bifunctional purine biosynthesis protein PurH; TAIR: AT2G35040.1 AICARFT/IMPCHase bienzyme family protein; Swiss-Prot: sp\|Q0AW31\|PUR9_SYNWW Bifunctional purine biosynthesis protein PurH; TrEMBL-Plants: tr\|A0A151RCA3\|A0A151RCA3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0107300	Domains G3DSA:3.40.140.20 G3DSA:3.40.50.1380 IPR002695 IPR011607 IPR016193 IPR024051 IPR036914 MF_00139 NON_CYTOPLASMIC_DOMAIN PF01808 PF02142 PIRSF000414 PS51855 PTHR11692 PTHR11692:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00798 SM00851 SSF52335 SSF53927 TIGR00355 cd01421	25
LotjaGi3g1v0107300.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Bifunctional purine biosynthesis protein PurH; TAIR: AT2G35040.1 AICARFT/IMPCHase bienzyme family protein; Swiss-Prot: sp\|Q0AW31\|PUR9_SYNWW Bifunctional purine biosynthesis protein PurH; TrEMBL-Plants: tr\|A0A151RCA3\|A0A151RCA3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0107300	Domains G3DSA:3.40.140.20 G3DSA:3.40.50.1380 IPR002695 IPR011607 IPR016193 IPR024051 IPR036914 MF_00139 PF01808 PF02142 PIRSF000414 PS51855 PTHR11692 PTHR11692:SF1 SM00798 SM00851 SSF52335 SSF53927 TIGR00355 cd01421	20
LotjaGi3g1v0107300.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Bifunctional purine biosynthesis protein PurH; TAIR: AT2G35040.1 AICARFT/IMPCHase bienzyme family protein; Swiss-Prot: sp\|Q0AW31\|PUR9_SYNWW Bifunctional purine biosynthesis protein PurH; TrEMBL-Plants: tr\|A0A151RCA3\|A0A151RCA3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0107300	Domains G3DSA:3.40.140.20 G3DSA:3.40.50.1380 IPR002695 IPR011607 IPR016193 IPR024051 IPR036914 PF01808 PIRSF000414 PS51855 PTHR11692 PTHR11692:SF1 SM00798 SM00851 SSF52335 SSF53927 cd01421	17
LotjaGi3g1v0161000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Carbamoyl-phosphate synthase large chain; TAIR: AT1G29900.1 carbamoyl phosphate synthetase B; Swiss-Prot: sp\|Q42601\|CARB_ARATH Carbamoyl-phosphate synthase large chain, chloroplastic; TrEMBL-Plants: tr\|G7IU57\|G7IU57_MEDTR Carbamoyl-phosphate synthase large chain; Found in the gene: LotjaGi3g1v0161000	Domains Coil G3DSA:1.10.1030.10 G3DSA:3.30.470.20 G3DSA:3.40.50.1380 G3DSA:3.40.50.20 IPR005479 IPR005480 IPR005483 IPR006275 IPR011607 IPR011761 IPR016185 IPR033937 IPR036897 IPR036914 MF_01210_A MF_01210_B PF02142 PF02786 PF02787 PR00098 PS00866 PS00867 PS50975 PS51855 PTHR11405 PTHR11405:SF5 SM00851 SM01096 SSF48108 SSF52335 SSF52440 SSF56059 TIGR01369 cd01424 mobidb-lite	36

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	12.50