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PF04438

Source: Pfam

Description

HIT zinc finger

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 12

Transcript Name Description Predicted domains Domain count
Lj0g3v0071459.1
– PREDICTED: box C/D snoRNA protein 1-like isoform X1 [Cicer arietinum] gi|502085927|ref|XP_004488052.1|
Domains
6
Lj0g3v0318179.1
– PREDICTED: zinc finger HIT domain-containing protein 3-like [Glycine max] gi|356548121|ref|XP_003542452.1|
Domains
6
Lj0g3v0346189.1
– PREDICTED: zinc finger HIT domain-containing protein 1 homolog [Glycine max] gi|356565970|ref|XP_003551208.1|
Domains
13
Lj1g3v4849460.1
– PREDICTED: suppressor protein SRP40-like [Cicer arietinum] gi|502112743|ref|XP_004494429.1|
Domains
10
LotjaGi1g1v0105000.1
– HIT zinc finger protein; TAIR: AT5G63830.1 HIT-type Zinc finger family protein; Swiss-Prot: sp|Q2TBW5|ZNHI2_BOVIN Zinc finger HIT domain-containing protein 2; TrEMBL-Plants: tr|A0A151S736|A0A151S736_CAJCA Zinc finger HIT domain-containing protein 2; Found in the gene: LotjaGi1g1v0105000
Domains
10
LotjaGi1g1v0759100.1
– HIT zinc finger,PAPA-1-like conserved region, putative; TAIR: AT2G47350.1 HIT zinc finger and PAPA-1-like domain-containing protein; Swiss-Prot: sp|Q99PT3|IN80B_MOUSE INO80 complex subunit B; TrEMBL-Plants: tr|K7KGE4|K7KGE4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0759100
Domains
10
LotjaGi2g1v0159200.1
– Zinc finger, HIT-type; TAIR: AT1G04945.1 HIT-type Zinc finger family protein; Swiss-Prot: sp|Q9NWK9|BCD1_HUMAN Box C/D snoRNA protein 1; TrEMBL-Plants: tr|A0A151T456|A0A151T456_CAJCA Box C/D snoRNA protein 1; Found in the gene: LotjaGi2g1v0159200
Domains
7
LotjaGi3g1v0058700.5
– HIT zinc finger protein; TAIR: AT5G63830.1 HIT-type Zinc finger family protein; Swiss-Prot: sp|Q2TBW5|ZNHI2_BOVIN Zinc finger HIT domain-containing protein 2; TrEMBL-Plants: tr|A0A151S736|A0A151S736_CAJCA Zinc finger HIT domain-containing protein 2; Found in the gene: LotjaGi3g1v0058700
Domains
10
LotjaGi3g1v0280800.1
– ATP dependent RNA helicase; TAIR: AT3G02065.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q3EBD3|RH41_ARATH DEAD-box ATP-dependent RNA helicase 41; TrEMBL-Plants: tr|A0A151SQV8|A0A151SQV8_CAJCA DEAD-box ATP-dependent RNA helicase 41; Found in the gene: LotjaGi3g1v0280800
Domains
22
LotjaGi3g1v0438300.1
– HIT zinc finger protein; TAIR: AT4G28820.2 HIT-type Zinc finger family protein; Swiss-Prot: sp|Q15649|ZNHI3_HUMAN Zinc finger HIT domain-containing protein 3; TrEMBL-Plants: tr|C6T4W0|C6T4W0_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0438300
Domains
8
LotjaGi5g1v0149600.1
– HIT zinc finger protein; TAIR: AT4G28820.2 HIT-type Zinc finger family protein; Swiss-Prot: sp|Q15649|ZNHI3_HUMAN Zinc finger HIT domain-containing protein 3; TrEMBL-Plants: tr|K7LZG3|K7LZG3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0149600
Domains
8
LotjaGi6g1v0108400.1
– Zinc finger HIT domain-containing protein 1 like; TAIR: AT5G37055.1 HIT-type Zinc finger family protein; Swiss-Prot: sp|Q9FHW2|SWC6_ARATH SWR1 complex subunit 6; TrEMBL-Plants: tr|V7BLH2|V7BLH2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0108400
Domains
14

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 8.33