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PF04857

Source: Pfam

Description

CAF1 family ribonuclease

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 27

Transcript Name Description Predicted domains Domain count
Lj0g3v0285229.1
– PREDICTED: probable CCR4-associated factor 1 homolog 9-like isoform X1 [Cicer arietinum] gi|502122303|ref|XP_004497679.1|
Domains
7
Lj0g3v0302439.1
– PREDICTED: poly(A)-specific ribonuclease PARN-like [Glycine max] gi|356524370|ref|XP_003530802.1|
Domains
9
Lj1g3v1820890.1
– PREDICTED: probable CCR4-associated factor 1 homolog 7-like [Glycine max] gi|356515030|ref|XP_003526204.1|
Domains
6
Lj1g3v3597190.1
– PREDICTED: poly(A)-specific ribonuclease PARN-like isoform X1 [Cicer arietinum] gi|502103237|ref|XP_004492234.1|
Domains
8
Lj1g3v3597190.2
– PREDICTED: poly(A)-specific ribonuclease PARN-like isoform X2 [Cicer arietinum] gi|502103240|ref|XP_004492235.1|
Domains
8
Lj1g3v4728920.1
– PREDICTED: probable CCR4-associated factor 1 homolog 11-like [Glycine max] gi|356572602|ref|XP_003554457.1|
Domains
8
Lj3g3v1237660.1
– PREDICTED: probable CCR4-associated factor 1 homolog 11-like [Glycine max] gi|356543624|ref|XP_003540260.1|
Domains
7
Lj3g3v2168450.1
– PREDICTED: probable CCR4-associated factor 1 homolog 7-like [Glycine max] gi|356526256|ref|XP_003531734.1|
Domains
7
Lj3g3v2960730.1
–
Domains
7
Lj3g3v2960730.2
–
Domains
7
Lj3g3v2960740.1
– PREDICTED: probable CCR4-associated factor 1 homolog 9-like [Glycine max] gi|356542778|ref|XP_003539842.1|
Domains
8
Lj3g3v2995610.1
– PREDICTED: probable CCR4-associated factor 1 homolog 9-like [Vitis vinifera] gi|225464848|ref|XP_002271636.1|
Domains
7
Lj5g3v0402690.1
–
Domains
7
LotjaGi1g1v0378700.1
– Polynucleotidyl transferase, ribonuclease H-like superfamily protein; TAIR: AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9SKZ2|CAF1G_ARATH Probable CCR4-associated factor 1 homolog 7; TrEMBL-Plants: tr|I3SY01|I3SY01_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0378700
Domains
10
LotjaGi1g1v0378700.2
– Polynucleotidyl transferase, ribonuclease H-like superfamily protein; TAIR: AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9SKZ2|CAF1G_ARATH Probable CCR4-associated factor 1 homolog 7; TrEMBL-Plants: tr|I3SY01|I3SY01_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0378700
Domains
10
LotjaGi1g1v0378700.3
– Polynucleotidyl transferase, ribonuclease H-like superfamily protein; TAIR: AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9SKZ2|CAF1G_ARATH Probable CCR4-associated factor 1 homolog 7; TrEMBL-Plants: tr|I3SY01|I3SY01_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0378700
Domains
10
LotjaGi1g1v0595700.1
– Poly(A)-specific ribonuclease PARN-like; TAIR: AT3G25430.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q8W4C3|PARNL_ARATH Poly(A)-specific ribonuclease PARN-like; TrEMBL-Plants: tr|A0A151SIG1|A0A151SIG1_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0595700
Domains
11
LotjaGi1g1v0595700.2
– Poly(A)-specific ribonuclease PARN-like; TAIR: AT3G25430.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q8W4C3|PARNL_ARATH Poly(A)-specific ribonuclease PARN-like; TrEMBL-Plants: tr|A0A151SIG1|A0A151SIG1_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0595700
Domains
11
LotjaGi1g1v0735100.1
– CCR4-NOT transcription complex family protein; TAIR: AT5G22250.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9FMS6|CAF1K_ARATH Probable CCR4-associated factor 1 homolog 11; TrEMBL-Plants: tr|I1NAS4|I1NAS4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0735100
Domains
10
LotjaGi3g1v0181000.1
– Polynucleotidyl transferase, ribonuclease H-like superfamily protein; TAIR: AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9LXM2|CAF1I_ARATH Probable CCR4-associated factor 1 homolog 9; TrEMBL-Plants: tr|I1LTY5|I1LTY5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0181000
Domains
8
LotjaGi3g1v0350800.1
– CCR4-NOT transcription complex family protein; TAIR: AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9SKZ2|CAF1G_ARATH Probable CCR4-associated factor 1 homolog 7; TrEMBL-Plants: tr|I3SSR5|I3SSR5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0350800
Domains
9
LotjaGi3g1v0350800.2
– Polynucleotidyl transferase, ribonuclease H-like superfamily protein; TAIR: AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9SKZ2|CAF1G_ARATH Probable CCR4-associated factor 1 homolog 7; TrEMBL-Plants: tr|I3SSR5|I3SSR5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0350800
Domains
9
LotjaGi3g1v0350800.3
– Polynucleotidyl transferase, ribonuclease H-like superfamily protein; TAIR: AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9SKZ2|CAF1G_ARATH Probable CCR4-associated factor 1 homolog 7; TrEMBL-Plants: tr|I3SSR5|I3SSR5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0350800
Domains
9
LotjaGi3g1v0350800.4
– Polynucleotidyl transferase, ribonuclease H-like superfamily protein; TAIR: AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9SKZ2|CAF1G_ARATH Probable CCR4-associated factor 1 homolog 7; TrEMBL-Plants: tr|I3SSR5|I3SSR5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0350800
Domains
9
LotjaGi3g1v0473600.1
– CCR4-NOT transcription complex family protein; TAIR: AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9LXM2|CAF1I_ARATH Probable CCR4-associated factor 1 homolog 9; TrEMBL-Plants: tr|I1LRJ8|I1LRJ8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0473600
Domains
9
LotjaGi5g1v0101300.1
– Polynucleotidyl transferase, ribonuclease H-like superfamily protein; TAIR: AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9LXM2|CAF1I_ARATH Probable CCR4-associated factor 1 homolog 9; TrEMBL-Plants: tr|A0A0L9U8M9|A0A0L9U8M9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0101300
Domains
9
LotjaGi6g1v0142100.1
– Poly(A)-specific ribonuclease PARN; TAIR: AT1G55870.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9LG26|PARN_ARATH Poly(A)-specific ribonuclease PARN; TrEMBL-Plants: tr|A0A151S4M2|A0A151S4M2_CAJCA Poly(A)-specific ribonuclease PARN; Found in the gene: LotjaGi6g1v0142100
Domains
10

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
SignalP-TM SignalP_GRAM_NEGATIVE 1 3.70