Domain Predictions — View

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PF09750

Source: Pfam

Description

Alternative splicing regulator

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 7

Transcript	Name	Description	Predicted domains	Domain count
Lj2g3v1873570.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: CLK4-associating serine/arginine rich protein-like isoform X2 [Cicer arietinum] gi\|502160855\|ref\|XP_004511931.1\|	Domains Coil IPR019147 PF09750 PTHR13161 SM01141 mobidb-lite	6
Lj2g3v3188450.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: splicing factor, suppressor of white-apricot homolog isoform X1 [Cicer arietinum] gi\|502099216\|ref\|XP_004491419.1\|	Domains Coil IPR000061 IPR019147 PF01805 PF09750 PS50128 PTHR13161 PTHR13161:SF15 SM00648 SM01141 SSF109905 mobidb-lite	12
Lj3g3v3213170.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: splicing factor, suppressor of white-apricot homolog isoform X1 [Cicer arietinum] gi\|502099216\|ref\|XP_004491419.1\|	Domains IPR019147 PF09750	2
LotjaGi1g1v0025900.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	SWAP (Suppressor-of-white-APricot)/surp domain protein, putative; TAIR: AT5G55100.2 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein; Swiss-Prot: sp\|Q3USH5\|SFSWA_MOUSE Splicing factor, suppressor of white-apricot homolog; TrEMBL-Plants: tr\|A0A0B2S0T7\|A0A0B2S0T7_GLYSO Protein suppressor of white apricot; Found in the gene: LotjaGi1g1v0025900	Domains Coil G3DSA:1.10.10.790 IPR000061 IPR019147 IPR035967 IPR040397 PF01805 PF09750 PS50128 PTHR13161 PTHR13161:SF15 SM00648 SM01141 SSF109905 mobidb-lite	15
LotjaGi1g1v0025900.7 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein suppressor of white apricot; TAIR: AT5G55100.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein; Swiss-Prot: sp\|Q8R753\|KPRS_CALS4 Ribose-phosphate pyrophosphokinase; TrEMBL-Plants: tr\|G7K8M3\|G7K8M3_MEDTR SWAP (Suppressor-of-white-APricot)/surp domain protein, putative; Found in the gene: LotjaGi1g1v0025900	Domains IPR019147 IPR040397 PF09750 PTHR13161 PTHR13161:SF15 SM01141 mobidb-lite	7
LotjaGi2g1v0401000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	CLK4-associating serine/arginine rich; TAIR: AT4G36980.1 CLK4-associating serine/arginine-rich protein; Swiss-Prot: sp\|A0JNI5\|CLASR_BOVIN CLK4-associating serine/arginine rich protein; TrEMBL-Plants: tr\|I1J967\|I1J967_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0401000	Domains Coil IPR019147 IPR040397 PF09750 PTHR13161 PTHR13161:SF4 SM01141 mobidb-lite	8
LotjaGi2g1v0401000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	CLK4-associating serine/arginine rich; TAIR: AT4G36980.1 CLK4-associating serine/arginine-rich protein; Swiss-Prot: sp\|A0JNI5\|CLASR_BOVIN CLK4-associating serine/arginine rich protein; TrEMBL-Plants: tr\|I1J967\|I1J967_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0401000	Domains Coil IPR019147 IPR040397 PF09750 PTHR13161 PTHR13161:SF4 SM01141 mobidb-lite	8

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	14.29