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IPR040397 is a Suppressor of white apricot.
<p>Suppressor of white apricot, also known as SWAP, is an alternative splicing regulator. SWAP was originally identified in Drosophila as a suppressor of the transposon-induced white-apricot mutation. It regulates splicing of several genes, including Swap itself [[cite:PUB00090913]]. Human SWAP has been shown to regulate alternative mRNA splicing of CD45 exon 4 and fibronectin IIICS [[cite:PUB00090912]].</p> <p>This entry also includes CLK4-associating serine/arginine rich protein (CLASRP, also known as SWAP2). The function of SWAP2 is not clear.</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | SWAP (Suppressor-of-white-APricot)/surp domain protein, putative; TAIR: AT5G55100.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein; Swiss-Prot: sp|Q3USH5|SFSWA_MOUSE Splicing factor, suppressor of white-apricot homolog; TrEMBL-Plants: tr|I1M6P0|I1M6P0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0025900 | 17 | ||
| – | SWAP (Suppressor-of-white-APricot)/surp domain protein, putative; TAIR: AT5G55100.2 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein; Swiss-Prot: sp|Q3USH5|SFSWA_MOUSE Splicing factor, suppressor of white-apricot homolog; TrEMBL-Plants: tr|I1M6P0|I1M6P0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0025900 | 12 | ||
| – | SWAP (Suppressor-of-white-APricot)/surp domain protein, putative; TAIR: AT5G55100.2 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein; Swiss-Prot: sp|Q3USH5|SFSWA_MOUSE Splicing factor, suppressor of white-apricot homolog; TrEMBL-Plants: tr|A0A0B2S0T7|A0A0B2S0T7_GLYSO Protein suppressor of white apricot; Found in the gene: LotjaGi1g1v0025900 | 15 | ||
| – | SWAP (Suppressor-of-white-APricot)/surp domain protein, putative; TAIR: AT5G55100.2 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein; Swiss-Prot: sp|Q3USH5|SFSWA_MOUSE Splicing factor, suppressor of white-apricot homolog; TrEMBL-Plants: tr|I1M6P0|I1M6P0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0025900 | 12 | ||
| – | SWAP (Suppressor-of-white-APricot)/surp domain protein, putative; TAIR: AT5G55100.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein; Swiss-Prot: sp|Q3USH5|SFSWA_MOUSE Splicing factor, suppressor of white-apricot homolog; TrEMBL-Plants: tr|I1M6P0|I1M6P0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0025900 | 17 | ||
| – | SWAP (Suppressor-of-white-APricot)/surp domain protein, putative; TAIR: AT5G55100.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein; Swiss-Prot: sp|Q3USH5|SFSWA_MOUSE Splicing factor, suppressor of white-apricot homolog; TrEMBL-Plants: tr|K7KBH2|K7KBH2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0025900 | 12 | ||
| – | Protein suppressor of white apricot; TAIR: AT5G55100.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein; Swiss-Prot: sp|Q8R753|KPRS_CALS4 Ribose-phosphate pyrophosphokinase; TrEMBL-Plants: tr|G7K8M3|G7K8M3_MEDTR SWAP (Suppressor-of-white-APricot)/surp domain protein, putative; Found in the gene: LotjaGi1g1v0025900 | 7 | ||
| – | SWAP (Suppressor-of-white-APricot)/surp domain protein, putative; TAIR: AT5G55100.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein; Swiss-Prot: sp|Q3USH5|SFSWA_MOUSE Splicing factor, suppressor of white-apricot homolog; TrEMBL-Plants: tr|I1M6P0|I1M6P0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0025900 | 12 | ||
| – | CLK4-associating serine/arginine rich; TAIR: AT4G36980.1 CLK4-associating serine/arginine-rich protein; Swiss-Prot: sp|A0JNI5|CLASR_BOVIN CLK4-associating serine/arginine rich protein; TrEMBL-Plants: tr|I1J967|I1J967_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0401000 | 8 | ||
| – | CLK4-associating serine/arginine rich; TAIR: AT4G36980.1 CLK4-associating serine/arginine-rich protein; Swiss-Prot: sp|A0JNI5|CLASR_BOVIN CLK4-associating serine/arginine rich protein; TrEMBL-Plants: tr|I1J967|I1J967_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0401000 | 8 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 10.00 |