Domain Predictions — View

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PF12662

Source: Pfam

Description

Complement Clr-like EGF-like

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 3

Transcript	Name	Description	Predicted domains	Domain count
Lj5g3v2099540.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: vacuolar-sorting receptor 1-like isoform 1 [Glycine max] gi\|356536097\|ref\|XP_003536576.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:2.10.25.10 G3DSA:3.40.30.10 G3DSA:3.50.30.30 IPR001881 IPR003137 IPR012336 IPR018097 IPR026823 NON_CYTOPLASMIC_DOMAIN PF02225 PF12662 PS01187 PTHR22765 PTHR22765:SF54 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00179 SSF52025 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK TMhelix TRANSMEMBRANE cd00054 cd02125	27
LotjaGi2g1v0460100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Vacuolar-sorting receptor-like protein; TAIR: AT2G14740.1 vaculolar sorting receptor 3; Swiss-Prot: sp\|P93484\|VSR1_PEA Vacuolar-sorting receptor 1; TrEMBL-Plants: tr\|A0A151RZ12\|A0A151RZ12_CAJCA Vacuolar-sorting receptor 1; Found in the gene: LotjaGi2g1v0460100	Domains CYTOPLASMIC_DOMAIN G3DSA:2.10.25.10 G3DSA:3.40.30.10 G3DSA:3.50.30.30 IPR001881 IPR003137 IPR013032 IPR018097 IPR026823 IPR036249 NON_CYTOPLASMIC_DOMAIN PF02225 PF12662 PS01186 PS01187 PTHR22765 PTHR22765:SF54 SM00179 SSF52025 TMhelix TRANSMEMBRANE cd00054	22
LotjaGi5g1v0322500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Vacuolar-sorting receptor-like protein; TAIR: AT2G14740.1 vaculolar sorting receptor 3; Swiss-Prot: sp\|P93484\|VSR1_PEA Vacuolar-sorting receptor 1; TrEMBL-Plants: tr\|I1LEE5\|I1LEE5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0322500	Domains CYTOPLASMIC_DOMAIN G3DSA:2.10.25.10 G3DSA:3.50.30.30 IPR001881 IPR003137 IPR018097 IPR026823 NON_CYTOPLASMIC_DOMAIN PF02225 PF12662 PS01187 PTHR22765 PTHR22765:SF54 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00179 SSF52025 SignalP-TM SignalP-noTM TMhelix TRANSMEMBRANE cd00054 cd02125	25

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd02125	CDD	1	33.33