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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0460100 |
| Transcript ID | LotjaGi2g1v0460100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Vacuolar-sorting receptor-like protein; TAIR: AT2G14740.1 vaculolar sorting receptor 3; Swiss-Prot: sp|P93484|VSR1_PEA Vacuolar-sorting receptor 1; TrEMBL-Plants: tr|A0A151RZ12|A0A151RZ12_CAJCA Vacuolar-sorting receptor 1; Found in the gene: LotjaGi2g1v0460100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:95364308..95372096) extracted from Lotus japonicus Gifu genome v1.2.
CAAAAATGAAAAGAAAAAAGAAGGTTGGAATTTGGAGAAGGAAATGATAAAGAAATATTATAGCTTGATGTCTTCATCCG TTGACTGACTCCACGCTTACTGGCTACTGCAAGTGCAAAGAGAGTACTGAGCAGTGAGAAATGTAAACAACATTGTTACT TCCTTCCCCTACTAAACAATAATTCAGAGCTGACAATTTGATTTTGAAGGAAAAAAATGAAGCATTGGAAATGGTCAGTG AGGTTGTTTGTAATTGTAGGGTTGGTTTTGCATGTGTCAATGGCGAGATTCGTGGTGGAAAAGAACAGCTTGTCGTCGGA CAAGATTAATGGGACATACGATACTGCCATCGCCAACTTCGGGATACCTCAGTACCTTGGGCGGGAACGTCATGTATCCC GAGAGCGAGAGTAACAACCACGGCTGTAAAGACTTTGAACCTGACTCCTTCAAATCACACCCCGGTGTTCTTCCTCCTAC CATCCTTTTACTCGATCGCGGAAGTCAGATTTCATTTCATCTCTTAATTTGGAATGTCGTCACGTCAGTCTTAGGTTTTA TTTCATGCCTTCTTTGTTCCTTTGCAGATTGCTTCTTTGCTTTGAAGGTCTGGAATGCCCAGAAGGCTGGAGCTTCTGCT GTTCTTGTTGCAGATAATGTTGAGGAACCTTTAATAACTATGGACACTCCTCAAGAGTATCAGGATGGGTCATCTCAGAA ATACATAGACAACATAACAATACCATCTGCTCTCATTGAAAAACGTTTGGCTCAAAAATTAAAGGATGCCATAAGTGATG GGGACATTGTCACTGTAAACCTTGATTGGCGAGAGGCTGTCCCGCATCCTGATGATCGTGTGGAGTATGAGTTGTGGACC AACAGCAATGATCAGTGTAGACTCAAATGTCATGTGTTGATGGAATTTATGAAGGATTTCAAGGGGGCAGCGCAGATACT AGAGAAAGGCGGTTACACTCATTTTACACCCCACTATATAACTTGGTACTGTCCTAATGCCTTCACGTTCAGTAAACAGT GTAAGTCTCAATGCATAAACAATGGGAGATATTGCGCTCCGGATCCTGAGCAGGACTTCACTACAGGTTATGATGGGAAA GATGTGGTTATTCAAAATTTAAGGCAGCTATGTGTTTTCAAGGTTGCAAATGAAACCAAAAACCCTTGGCTGTGGTGGGA CTATGTAACTGATTTTCAAATCAGATGCCCAATGAAGGAGAAAAAGTACAATAAGGAATGTGCAAATGCTGTCCTAAAAT CACTGGGTGAGTGAATCATCATTACTTATCAGGTTTTATGTTTTCTTGCAGCTGTTGAGAATGACCTTGCTAATACATTT ATTCAATATTTGCAGGTCTTGATATCGCAAAGATTGAAAAATGCATGGGAGATCCAAATGCTGATACTGAAAATTCTATT TTGAAGGAAGAGCAAAATGCCCAAGTATTGTCTTTTATAATTAATTGCTTTAAGTTTATGTCATCATTTTAATTCACTGT ATCGGCATAACCACATATAAAGATGTTTAACAAAACTAGTTCTTGTAGGTTGGAAAGGGATCCCGAGGTGATGTTACCAT ATTGCCTACTCTTGTTGTAAACAATCGACAATATCGAGGTTTGTCCTGTATGCTTGTGTAATAGGCTAATAGCCATATGG ATTTCTGATTTAAATGGAGTCTTTCCAGGAAAATTGGAGAAAGGTGCTGTTCTAAAGGCTATTTGTTCTGGGTTTGAGGA AACTACTGAACCAGCTGTTTGTTTAAGCAGTGGTAAATGTTCATTTTCTTTTGGCATAACTTTCTATTGGTATAAGACAA ATACACGTTGTAGATTCCTTGGTTCTGGACCTGATTCCTCTGAGTGGCATACTTTTCTGGCAGATATGGAGACAAATGAG TGCTTGACGAACAATGGTGGTTGTTGGCAGGATAAAGCGGCTAACGTTACTGCATGCAAGGTATTTTTCTGCATGAGAAC AGCTATCTAACAATATTGCAATGCAGGTTTTGATGTTCTTATATTTGTGTATATCTGCTCAGGATACATTCCGTGGCCGA AAATGTGAGTGCCCCCTGGTTGGTGGTGTGCAGTTCAAAGGAGATGGTTATACGACTTGTGAAGGTTAAATTGTTTTAAG TTCTATCTTTCTCTCTGCATAAATTACTATGAAATGAGTTTTTTTATTTTAATTAATTACTGTTTCATGTTATACCCTTC ACTTCCATATAGTGCATAGCAGGGTATGACGAGTTATGGGACATCTGTGATTTTCCCCCATGTGCATTTCTAGGCTCATA AAACTAGTTCCTTTTGAGTTTGCAGTCAGTGGATTTGGGCGTTGCAAGATTAACAATGGAGGCTGTTGGCATGATGCCCG GAATGGACATGCATTTTCAGCTTGTTTGGTTAGTAACTGATAAGTTTTTTTATCCAACTCCACTCAACTTCTTTTGTCTC CCAGTTTGTTTTAAGGGTTGAAGCTCTGTTGTCCTGTAAACACTAATAGAAACTTAATAATTGTATAAACTGTTATGAAA ACAGGATAATGGAGGGGTTAAATGCCAGTGTCCTACAGGGTTTAGAGGTGATGGTGTCAAAAACTGTGAAGGTGAGGGGT GCTTCCATTTTTTTTTCTTTGTTACTTCTTTTACCCTGTTTTTTAGGTTTCTAAATTATATAGATCAATTTGGTAAATAC TATGCACATCATGAATGAAATCCTGGATGCTGCTTTTACTACCTTTATCAATTATGAGTGAATATGTTTAATCTTTGTTA GAGTATAATATAAAACCATTAAAGTGGCCCTTACCCAACAGCTTAAGCTTTTGGGATTAAGTGGTTGTCTGACATGGTAT CAGAGCCTCTATGACCGAAAGGTCTAGAGTTCGATCCTTGCTCCCCTCACTTTCTAATTAAAAAGTGGAATTTAATTAAG CACATGGTAGGTGGGCCTGTGCATTTATCCACGCTTCAAGCCCAAAGGGCTCTTGCGTGAGGGGGCGTGTTAGAGTATAA TATAAAACCATTAAAGTGGCCCTTACCCAACAGCTTAAGCTTTTGGGATTAAGTGGTTGTCTGACAATCTTGAATGTCAT GTATAAATATGTGTCAAATATTAATGGGATTCATGGTTTACTGTTTTATACTATGAGTTAGTAGATGATGATTTAATGAT GGAACTGGGTCATAATTTTGTCCTCCCCTTTTTTCCCAAAAAAGTAACCTACTCTCATTTTGTTTGATTGGAGAGACTTA TTGCAGTCTCAGTATCAGTGAGGGAAATGTTGGCTTTTATACTTGTATTACCTGTTGTTTAATTTCCTGCCACCATCAGC GCTGCAATGTCTTCTTAGTCCTTGAGTTTGAACAAACATTGGAAGCTTGATGATACCAAGTGAATGTTTTCCACGTAACT GGAAAAAAAACACAGAATATTGGAAATTGAACTACTTGTGTTTCATCTTTACAGACATTGATGAATGCAAAGAGAAGAAA GCTTGTCAGTGCCCCCAATGTAGCTGCAAGGATACTTGGGGCAGCTATAACTGCAGTTGTACTGGAGATCTTCTTTATAT TAAGGACTATGATACTTGCATAAGTGAGTTACTTTTTTACTTTCACCTGTATTTGAATACTCTTGTTAAAACACTTGTTT TCATGTCCCCTGCTGGATAATCTACAGGTAAATCTGGGAGTCGGGGAAGATCTTCTTTGGCTGCTTTTTGGGTCATTTTA ATTGGCTCAGTAATGATTGCTGGTGGGGCATTCCTTGTGTACAAGTATAGAATAAGGGTAAGCTCTGCTGCATTCTCTCA TTTTGATGATGTTATTGGATGCAAAATGCTAAATTTCTTTAGCATTATAGCATGCTGAGTTGCCCAACATTCCAGACCTG TATAACCGAGAGATTACTCAAATAAAGACGCAAGTGATGTTTCAGGATAATTTACTTCATTGTGTCTGATAGCATAAAAA TTTAACAGTACTTCCGTTGATGGTTTTGCAGCAATACATGGATTCCGAAATCAGAGCAATCATGGCACAATATATGCCCT TGGACAGCCAAGCAGAAGTTCCAAATCACGTCAATAATCAAAGGGCATGAAAGGAAAAACAGGTCAGTCTCTTGGGATTT CATGGCTTACTGCATGGGTGTGGCTTTTCATGTGTCCTTTTTCAGCCATTTAGAATTCTGACCATTGAATTTAGTCTGAT GTATCATATGGACAATAAAAGATTGATAGTGTGAATGATATCTTGTTTTTTTTTTCCTTTTTCTTTGGGGGGTTGTTGGA AATGTAACATTATGCTTAGAAGGGGCACACTATTGTTACTTACGGTGCTGTAGTACAAGCGAGCTAACATCTCGATGTTA TTCCATTGCTCTGTGGTATGTTCTTCCATTTCTGCCACTTACTTCGTGAGGGGTGTGTGAAATTGCGTTCAAGATGTCAA TGTTAAGCATTAGTGATGAATTATGATGCTGTCTTACATCAGATTCACAACCTTGCAGCCTCAACATTTGTGACACTAAC GATAATTAAGCATTAAATCCATCAGAGCAACCCAATAGTGTCTTCCTGGTTTATGTAACAGGCTTTATACTCTACTCCGT AATAATTACTAGTTCAAAGGAGGATTGCCCTTGTTCTTATTTTAAGATATGGTTATATTTTACTAAGTGGTAAATACATT TTTACTAAGTAAAATATATAAATGGAAATTAAAAGAGTAGACATTTAAAATCATGAGAGAGAGAGAGAGAGAGAGAGAGA GAAATAATTAAATTTAACACTGTAAAACAAACATGCTCTTATAGTTTTCCTTTTTAGCACACTCCTTCACTATTCAACAT TGTTTAGATATATATAGTTAACACTTAACACAACAAAAATCATCACAAAATGGCATCCCAATCTCTTAAACTGCTGGAGA CTTGTTTGCTGCAATGATATGCATATCCTTTGATTCTTTGATTAGGGGGAGGTTAAGTTCCAGTCCAATGTTCATTCCAT TGTAAGCAATGGGAGCGTACATCCACATATCGTCAGAGCTTAGAAGCTGTCAAATTGGTATAGGAGAAAAAATTGATCAG CCATTGTCTTTCCAAATATGTAAGAAATTAGTTGCACTGAGCTAAAATTTAGCAGAGTAAGTCATGTTGTTACTTTAATT TGAAGCTGTAAAAACTTCACGTATTGGACAGCTTCCTCAAGCATGGTGCTGATATCTACCTGCAGTTCACCAAGGAAGCA GACTTCAGAATTTTAGCATCCTAACCAGTTGTCTAACAACAGTGTGACTATTGACATTGGGTAGAGAAAATTACCTTAGT TCCATTGGGGACAAGGCTTTGTAGGATTCTTAGCCTTTCATTTATTCTTTCTCTTCTTCTCTGTACAATGCAAAAGGAAA ACCTCGTTAGAGTTAACCCCTCACATGGCTACATGAACAACAACACAATATCACAAATTACTAGAAACTAGCAACAATAA CTAAATCATATACCCTTCACAAAGGACTTACTCTTGCATAGACGCTCTGTGGATCAGTAGCAGGACCTCTACTAGATGTT GATTTGCTACTTAACTTCATAGCTGAAGAATCATTCAGACTCAAACTTGAAGATGACCCTCCGCGTTGCTCCAGAGAAGC ATTGGAGTCATCATCTGAGCAGCAAGTCTGATCCTGAGGACCAGGACTTATATCCTCTTCAGTACTTATAGAAGCAGACC TTGTATTCTTCTTAGATTTAACATTCCTATTGTTCTTTGGGACCTGTTAAATCAAATCATGAGGAGAATTTCACAACATG AAACACATGCCATAACATGTGGAAGAAAGGAGCAAGTGAAATATTTAGAATGATTTTACCTCATTTGAGCTCCTACATCT TTTTCCTGATTTTGGCCGGCTTCTGATTTTATCCTCTTCTGGTTCAGAAACTAGTATTTCACGTTTCTTGTGTGTTTGCA AATTCTTGTCAGCAAGAACCACTGTCCCTGTGTCTTGGCCTAACTCGTCATCAATGTTTTCATTTAGATGTTTGCTGTCA TTCCCTTGTACTCTATGTGGGCTGAATTTGGAATCGCCGGCTGAAAAACACATTGGCATATAGCCAAAATTTGTAACTGA ACTATTGGTGCAGTTGACACCACTTGTAGTGGGAAAGATATTATTATTATCAGCACTTGAGCTACTACTCCCTTGCAAAA AACACATATAATTAGTATTTGCAGGTTCATAGAACTGCTGTGGGACTGCACAGTTACCAAGCAACTGGTGCATAAAGTCA GCTTCCTCAGCCGTGTAAGCCCCACTAAGAGAACTCCATTCTTCAGAAATATGCACAGCAGACTCCATTTTCTTTCTTTG GACACCTATTAGTATTAGAGAGTGTTAGTTAGTTACTGTAGAAGAAGCTCCAGTTGTTTGAATGCTTGAATGGAAAAGTC TGATCAGTTCTATTTATAGTTTTATACTCTCTACCAAATGGAAATGGGAATAATGTAATATGAAAATATCTGAATCCATA ATTGCCAATAATTAGCATCTGACAAAGTCTCAATGCCTTCAAATGTGGTTCTTTATGGGACCACTGAAGCCTCAAAGAAG AGGACTGGTTTAGAAATTAGAATAGAAACATTATTCTCCCACACGGATTACCATTATAAAAAATCCACCCGCATGTGAGA GAGAAAAAATAGTACAAGTTTTGCTGAATGAGAGAGGAGATAAAGAAAGAGAATGACACCTGTTAATTCATTGTGAGACG CGGGATTGTGCGTTGAAAATGAAAATGACGTAGGCAGAATCAGAAAGACGGCCTGAGATCGTGGTGACTAATATTGTTAT TGAACCAAACACCATTATCTGTAACTGGATTTTTGTCTCCTGCCAACCATATTCTCTTCAAACTTCAACCCAGGTTTCAA TAGTAGAGCTTTAGAATGTTTGGAATTCCTTCTCCATACTTAATTCTAAAGCTTAAATCAATTTTGCGGATAAGCTTCTC TGATCAGTTTTTCTGTGCTAGACTTGATTATGAGAAAAAATAAGTTGATCCAAACATATAATTTGATACTATTACATTAT GGATGGATATGATACATTGTTCTTTTGCCTAGCTAGTTCATCAGTTTCCGAGATTAGCATAGCACATTCTGTTGTCGCTA GTTGACATGGTAAAAAATCAGGCAATTCATGACAAACTTGATCCGTGTGTGGCCTAAAGTCTAAAGATATGCACTGGGCA CTACTTGATAAACAAATTTAATCTCGTTACTATTATGATATATATGTGGCTTATGGGTAGTGAGTACTGACTAGTGATTT ATTATCTTCTGTAAGGTGTCAATTGGAGCACAAATTACATAATAGTTTATGTTATTTTGAATAAGCAAATTACAATTAGG GAATATATAAATTGGGAGTATTATACAAGCCATGCGAAGCATAAAGTTAAGTACAAAATTTTCCTAATTATTCAATTACG TTTGGTTTACAGTTATTTTGAATATGGCTATTAATAGATTCTGTGTTATCTAATAGTATAAATACTTTTAAGGGGCTACT TGTCATGAACCAACTACCTTTAAACATTGGAGATATTTTATTTATAAAATGGTGTTGATATATATGTCTTTTATGATCAA GTGGTTTATACTCTTGTTACTCAATTTATTTACCATAAGAAGTAAATTTTAGCATAAGATAGGTGATTTTGTACAATGTT ATTTTTTATAACTACTAGTAACATCTTAT
CDS sequence (LotjaGi2g1v0460100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGTCAATGGCGAGATTCGTGGTGGAAAAGAACAGCTTGTCGTCGGACAAGATTAATGGGACATACGATACTGCCATC GCCAACTTCGGGATACCTCAGTACCTTGGGCGGGAACGTCATGTATCCCGAGAGCGAGAGTAACAACCACGGCTGTAAAG ACTTTGAACCTGACTCCTTCAAATCACACCCCGGTGTTCTTCCTCCTACCATCCTTTTACTCGATCGCGGAAATTGCTTC TTTGCTTTGAAGGTCTGGAATGCCCAGAAGGCTGGAGCTTCTGCTGTTCTTGTTGCAGATAATGTTGAGGAACCTTTAAT AACTATGGACACTCCTCAAGAGTATCAGGATGGGTCATCTCAGAAATACATAGACAACATAACAATACCATCTGCTCTCA TTGAAAAACGTTTGGCTCAAAAATTAAAGGATGCCATAAGTGATGGGGACATTGTCACTGTAAACCTTGATTGGCGAGAG GCTGTCCCGCATCCTGATGATCGTGTGGAGTATGAGTTGTGGACCAACAGCAATGATCAGTGTAGACTCAAATGTCATGT GTTGATGGAATTTATGAAGGATTTCAAGGGGGCAGCGCAGATACTAGAGAAAGGCGGTTACACTCATTTTACACCCCACT ATATAACTTGGTACTGTCCTAATGCCTTCACGTTCAGTAAACAGTGTAAGTCTCAATGCATAAACAATGGGAGATATTGC GCTCCGGATCCTGAGCAGGACTTCACTACAGGTTATGATGGGAAAGATGTGGTTATTCAAAATTTAAGGCAGCTATGTGT TTTCAAGGTTGCAAATGAAACCAAAAACCCTTGGCTGTGGTGGGACTATGTAACTGATTTTCAAATCAGATGCCCAATGA AGGAGAAAAAGTACAATAAGGAATGTGCAAATGCTGTCCTAAAATCACTGGGTCTTGATATCGCAAAGATTGAAAAATGC ATGGGAGATCCAAATGCTGATACTGAAAATTCTATTTTGAAGGAAGAGCAAAATGCCCAAGTTGGAAAGGGATCCCGAGG TGATGTTACCATATTGCCTACTCTTGTTGTAAACAATCGACAATATCGAGGAAAATTGGAGAAAGGTGCTGTTCTAAAGG CTATTTGTTCTGGGTTTGAGGAAACTACTGAACCAGCTGTTTGTTTAAGCAGTGATATGGAGACAAATGAGTGCTTGACG AACAATGGTGGTTGTTGGCAGGATAAAGCGGCTAACGTTACTGCATGCAAGGATACATTCCGTGGCCGAAAATGTGAGTG CCCCCTGGTTGGTGGTGTGCAGTTCAAAGGAGATGGTTATACGACTTGTGAAGTCAGTGGATTTGGGCGTTGCAAGATTA ACAATGGAGGCTGTTGGCATGATGCCCGGAATGGACATGCATTTTCAGCTTGTTTGGATAATGGAGGGGTTAAATGCCAG TGTCCTACAGGGTTTAGAGGTGATGGTGTCAAAAACTGTGAAGACATTGATGAATGCAAAGAGAAGAAAGCTTGTCAGTG CCCCCAATGTAGCTGCAAGGATACTTGGGGCAGCTATAACTGCAGTTGTACTGGAGATCTTCTTTATATTAAGGACTATG ATACTTGCATAAGTAAATCTGGGAGTCGGGGAAGATCTTCTTTGGCTGCTTTTTGGGTCATTTTAATTGGCTCAGTAATG ATTGCTGGTGGGGCATTCCTTGTGTACAAGTATAGAATAAGGCAATACATGGATTCCGAAATCAGAGCAATCATGGCACA ATATATGCCCTTGGACAGCCAAGCAGAAGTTCCAAATCACGTCAATAATCAAAGGGCATGA
Protein sequence (LotjaGi2g1v0460100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MCQWRDSWWKRTACRRTRLMGHTILPSPTSGYLSTLGGNVMYPESESNNHGCKDFEPDSFKSHPGVLPPTILLLDRGNCF FALKVWNAQKAGASAVLVADNVEEPLITMDTPQEYQDGSSQKYIDNITIPSALIEKRLAQKLKDAISDGDIVTVNLDWRE AVPHPDDRVEYELWTNSNDQCRLKCHVLMEFMKDFKGAAQILEKGGYTHFTPHYITWYCPNAFTFSKQCKSQCINNGRYC APDPEQDFTTGYDGKDVVIQNLRQLCVFKVANETKNPWLWWDYVTDFQIRCPMKEKKYNKECANAVLKSLGLDIAKIEKC MGDPNADTENSILKEEQNAQVGKGSRGDVTILPTLVVNNRQYRGKLEKGAVLKAICSGFEETTEPAVCLSSDMETNECLT NNGGCWQDKAANVTACKDTFRGRKCECPLVGGVQFKGDGYTTCEVSGFGRCKINNGGCWHDARNGHAFSACLDNGGVKCQ CPTGFRGDGVKNCEDIDECKEKKACQCPQCSCKDTWGSYNCSCTGDLLYIKDYDTCISKSGSRGRSSLAAFWVILIGSVM IAGGAFLVYKYRIRQYMDSEIRAIMAQYMPLDSQAEVPNHVNNQRA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 548 | 548 | - | – | |
| Gene3D | 27 | 165 | 139 | 2.6E-36 | – | |
| PANTHER | 34 | 601 | 568 | 1.8E-219 | – | |
| PANTHER | 34 | 601 | 568 | 1.8E-219 | – | |
| Pfam | 52 | 142 | 91 | 2.3E-10 | ||
| SUPERFAMILY | 70 | 149 | 80 | 2.22E-8 | – | |
| Gene3D | 256 | 380 | 125 | 4.1E-5 | ||
| Gene3D | 449 | 529 | 81 | 1.5E-9 | – | |
| Pfam | 478 | 498 | 21 | 1.2E-6 | ||
| ProSitePatterns | 479 | 493 | 15 | - | ||
| SMART | 495 | 537 | 43 | 0.0039 | ||
| CDD | 495 | 523 | 29 | 5.50976E-4 | – | |
| ProSitePatterns | 495 | 521 | 27 | - | ||
| TMHMM | 547 | 569 | 23 | - | – | |
| Phobius | 549 | 569 | 21 | - | – | |
| Phobius | 570 | 606 | 37 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). |
Expression pattern of LotjaGi2g1v0460100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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