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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0322500 |
| Transcript ID | LotjaGi5g1v0322500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Vacuolar-sorting receptor-like protein; TAIR: AT2G14740.1 vaculolar sorting receptor 3; Swiss-Prot: sp|P93484|VSR1_PEA Vacuolar-sorting receptor 1; TrEMBL-Plants: tr|I1LEE5|I1LEE5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0322500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:64101876..64110563) extracted from Lotus japonicus Gifu genome v1.2.
GTATGAGAGTTAGGTTCCCGCGTGTTACTCTGTGTAATTTCTCATTTTTTCACTCATTTCCTCCAAATAAAAAAAATAAA AAGTAGAATTAAGTTAAATTTTGTTTAATCAAGTTAATTTTTTTAATAAAGGGATTATTATTATCAACAAGTAAACTAAC CGTGATTAGTGCTTAATGGGTAAGATTTACTAGAAGAGTTGCATTCTGTTTGTGTCTGTGTGGTGTGGACTCATCAGAAT CAGAGTCTTCAACTTTCTCTCTCTTTCTCTTTCTTGTTTCTACGTTGTTGTTGTTGTAACACAATCCTCTTACCAACAAA ACAAACATTAAATTTCACAACTTAGATTTGTTTCTCCTCAAACAACAACAAAAAAAAAATCTCACTCTCCATTTTTTTTT TCCATCTTTATTCAAATAACAAGCTGAGTGAGAATCAAGAATCAACTTGCAATTTGGAACAATTCGGAAAACCCAGTTGC GGATCAAGATGATGAAGCTTCGGAGATTCTCGCTGGGTTTCCTTTTAGGGTTTCTGTTGTTGCTGTCGGTGACGCCGTCG TCAATGGCGAGATTTGTGGTGGAGAAGAACAGTTTGACGGTGACTTCGCCGGAGGATATCAAGGGTACCCACGATAGCGC GATTGGCAACTTTGGGATTCCGCAGTACGGTGGTAGCATGGCTGGGAACGTTGTGTACCCCAAGGATAACCATAAGGGTT GTAAGGAGTTCGATGAGTCTGGGATTTCCTTTAAATCTAAGCCTGGAGCTCTTCCCACTATTGTTTTGCTCGATCGTGGA AGTAAGATTCTTCTGTTGTCAACTGTTTACTTCACTGAGATCTTATCAGGGTTTATGCAATTTTTTTTTTTTTGAGTTTT GCTATTTGGGTAGTAGCTATAGGATGATTTTGTCTTTGTGCATGTTTGGATACATGGTAGATTTTCACCTGAATTGATTC TGGGAGAAGCTAATTGACTCTGGAAGATGTAAATGTGAATGTGAATCGAAACATGCTATTTGTTGCTTTGATTATTTTGC TTTTTCTGAGCTGAAGTTGGTTGATTTTGTCAGTTTAATTACAGCTATTGCTTGTATATGTCTGCCCGGATTTATATTAC AATTTACAAGACTCTTCTTTCCTTGTTCAAGTATTTTCCCCCCATTGTCCTCGGTTTTGTTCGGATTGGAATTTTCGATG TGTCACTTGATTGTTTTATTTGGAAAGAGTTATACAATACATGCCTGGTTTATCCTTTATCTTTTATTGGAGAAAATAAG TTGTTGTCCCATTAGCTTGTTTTAATGATGGTTTTAGATATGGTTTTTGCGGTTCGTTTGATAGTTGATTACCTGTGAAT TTAAATTTGCGATTTGCTTTTACACTTGTGTTGAGGAAGTGAGAGTTTGACTAGCATGCTATAAGTTTGACCAAGTCTTG AAATGTTCTCTCCTGGGGTGTATTCTTAGTTTCTTTTATGTGTCCCTTGCAGATTGCTTCTTTGCTTTGAAGGTCTGGAA TGCCCAGAAGGCTGGAGCTTCTGCTGTTCTTGTTGCGGATGATATTGAGGAAAAATTAATTACCATGGACACGCCTGAAG AGGATGGATCATCTGCAAAATACATAGAGAACATAACAATACCATCAGCACTCATTGAAAAAAGCTTTGGTGAAAAATTA AAGAAGTCCATAAGTGGTGGGGAGATGGTCAATGTAAACCTTGATTGGAGGGAGGCTGTCCCCCACCCTGATGATCGTGT GGAATATGAGTTGTGGACCAACAGCAATGATGAGTGTGGAGTTAAATGTGATATGTTGATGGAATTTGTGAAGGATTTCA AGGGTGCGGCTCAGATTTTAGAGAAAGGTGGATATACTCAGTTTACACCCCATTATATAACTTGGTATTGTCCCAAGGCA TTCACATTAAGCAAACAGTGCAAGTCCCAGTGCATAAATCATGGAAGATATTGCGCTCCAGATCCTGAGCAGGACTTTAG CACTGGTTATGATGGGAAAGATGTGGTTATTGAAAATTTAAGGCAGCTATGTGTTTATAAGGTGACAAGTGAAGCCAAAA AACCTTGGCTTTGGTGGGACTATGTTACTGATTTTCAAATTAGATGCCCAATGAAGGAGAAAAAGTACAACAAGAAATGT GCTGATGCTGTCATTGAATCACTAGGTAAGTGAATCGTTGTTGCTGTTTTTGTTTTTATTTGGTGATTGGAAATGACTTT TTGAATATGTTTTTTCAATGTCGGCAGGTCTTGATAATAAGAAGATTGAAAGGTGCATGGGAGATCCAGATGCTGATTCT GATAATCCTGTTTTGAAAGAAGAGCAAGATGCCCAAGTACTCCTTTATTTGTATCATTTAATTGATTGTATAAAATTGTT ATGTATCGATGTTTAACAAACTTGTTCTTATAGGTTGGGAAAGGATCCCGAGGTGATGTTACCATATTGCCTACTCTCGT AGTCAATAATCGACAATATCGAGGTCTGTGCTGAATGCTTCTCTAATACATGGTGATATGGGTTTTCAATTCTTAAAGTA TGTTTTTTTTCCAGGGAAATTAGAGAAAGGTGCTGTTATGAAAGCTATTTGTTCTGGTTTTGAAGAAACTACTGAACCAG CTGTTTGTTTGAGCAGTGGTAAGTAAATGTTTGCTTTCTTTTGGTATTTATTTTGGTTGGGGGTGGATATATTTTTTGTT GTCTTGTTAGTTTCGAACCTTTGAGTGACAAACTTTTCTTGGCAGATGTGGAGACAAATGAATGCTTGGAAAATAATGGT GGTTGTTGGAAGGATAAGGCAGCTAACATCACTGCATGCAAGGTATTTATGCTTTAGTGACAATAACTATCTAATAAGAG GGCAATTGGGATTTCAGTTTTCTCTATTCCTGTTAATACATGTAAATATTTTCTCAGGATACTTTCCGTGGGCGAGTATG TGAGTGCCCCTTGGTGGATGGTGTGCAGTTCAAAGGAGATGGTTATACAACCTGCGAAGGTTAAAATACAAGAAACTTTT CTCTTTGCATAAATTTCATCAGAACTTTATCTATTTCATAAGTATCTTCTATAGTTTAAGAGTTTCTAATTAAATTTTTG TACTTCTATTAATTGTTAAATTGATCCCTACTGGTTGATGGCTAGTAAACTCCCGTTTTGGATATTTATAGTCTTTTGCT AGTCACTATTACTGGTTTCAAGTACTTCTTTATAAAGCTTTATGAGCAGTAGGAACCTAGTTGAAAATTTAGTTAAACTT AAAGGACTGATTTCAAAAATTCTAAATTAGTGTCAGGATCCCATTAAAACCTCTTAAACTAGAGACTTATTTTCAAATTC TGTAAAAATATGGGAAACTACAGGATAACTTAACCATTTTTGCAAATGTGTATTCATAGTCATACATAGTTTCAATCAAC TGGGCTTTTCTGGGTTTTCAGCTAGTGGACCTGGGCGATGCAAGATAAAGAATGGAGGATGTTGGCATGAAGCCCGGAAT GGACATGCATTTTCTGCTTGTGTGGTTAGTAGTTACCAAGTTTTTTCATGCTCCATTCAGCAGCATGTTTTGTCTCTACT GAATCTTTAATATTTGAAATTTACTGGTTTACAAATCTATAATGGAAAATTGAGTTGTGACTTAAGTTGTCATTACTTCA CGAACAGGACGATGGAGAAGTTAAATGCCAATGTCCTGCAGGGTTTAAAGGTGACGGTGTCAAAAATTGTCAAGGTGAGA CATTTTGGCATTTGTTATTATTTTTGTTGTCCCTTGAGCGGACCTTTGTATTGTTATGTTTATCTAGAACATAGTAAGTT ATGTACGACATATACCTAAAAATTCTGGATCCTGATTCAAATATCATTGTCAAGGTAAGCTGATATTCTCATTGCTCTTC AAATATGTCCGAAATAGTATATGATCCATGGTTTAATGTACAGTATTTTTGGATTATAGTTTGCAAACCATTGTTTGAGA GTCAACTAAAAAAGAAAAACTTTCTTCCTTTCGACTTGAGCTATAGATAAAACCCAGTTTTAAGATTAACCAGCCGAAAT TTTGCCAAGCATGTTTTGAGGATGAAACTCTTTTTTGCACCCTAAATAGTATAAACTGGTTTGCAAACCTGCTATTAAGT TTTGAACTATTACTACAATAGCACCCAATACTGAAACCTGGGCCACATTTTTGCTCAAACTTCTCCCTATGATCATATGT AACAACATCCTTCTTAGAATTTGGATTAGGCATTTAGGCCTAACTCTACCCCAAAAGCTGCTTAGGAGTGAGGATCACTC TACCCTTTTTAAGAACTATTTGGAGTCAATGTGGGACTTTTCAACAATCCTTAAATTTGTATTTTCTGCAAGTTAAACTC AGTATGCAACATTAGGACAACAGAAATGACTTAAAATAGAAAGACATATTGCTGTCTCAGTAAGTGAAATGTTGGCTTGT ATGTGAATTATACTTAGACAAATCAACTTCATCTTGCCATTGATAATAATACCTTGAAATGTTTTCATCATAATGAAAAT GAATGAACTTCTAAAGTTGAACTACTCCTTCTTCATCCTTGCAGACGTTGATGAATGTAAAGAGAAGAAAGCTTGCCAGT GCCCTGAATGTAGCTGCAAGAATACTTGGGGAAGCTATGACTGCAGTTGCAGTGGGGATCTTCTGTATATTAGGGACCAT GATACCTGCATAAGTGAGTTAAATACACTTGACGTATTTTTTCTTACACAAAAATTTGAATGTGCTTGTTTTCATATTCC CATTGGGTATTCTGCAGGTAAAACTGCTAGTCAAGGAGGAAGATCTGCTTGGGCTGCTTTTTGGGTCATTATAGCTGGCT TAGTTCTATCTGCTGGTGGGGGATACCTTATATACAAATACAGAATAAGGGTAAGCTTTGTTGTATTTTCTCAGTTTGGT GATGCTATTCAATCCCATCTTCAATTCTAAATTTATTTTTCGTATGAGATCCATCAAGTGCATGTTTGGAAACCCTTCTA CGATTGATTCTGAAGACATAATCAATTTTGAGGACAAGCTTCTATGAGTAGCTTCTAGTTACTAGAATTGATTGAGACAA AAGAAGCTGATCCAAACATGCTATAAGTTCCATGTCAGCTGAGTTTTTTTGTTAGAGTTCTATGAGAACATGACATTTGT GTCAGAAATATTTGCACCGATCTGCTACATCTTACAGAAGCAAGAGACGTTTCCTTTGTAATTTACCTGGTAGTGTTTTG CTTGTGCAAAAAGTTAACTGTACATTTCTTGTTGTCTTGCAGTCATATATGGATTCAGAAATCAGAGCCATCATGGCACA GTACATGCCCTTGGACAGTCAAGCAGAAGTTGTAAATCATGTGAACGATGAAAGAGCATGAAAATGAAAATGTTGAGGCC TGGGTGACTTGCCCTGAACCTTTTTGAACTGTTCAGGATTCTGAGCTTTAAATTTAATAGACTGTATCATATGGACAATA AAAAAGTTGAGAATTAGATAGTTGCCCTGTGTTTTTATTCAGAATGTACCAAGTTTTATACTTGTGATGGCTGAATTTAG AGCAGACTAAGTTATTTCACTAGATTCTAGGATGTGTTTATGTGACTTCTTGTTCCACATTTATGATTGTAACCTATTGT GCTTTTAGTACAGGCTTTAGTTAACACTGTTCTTCCATTGATTGGTGGGGTTGTTCTTCTTGCTTCTTTCATAGCCAGGT TTTGCCATGAATTGTTTGTAGTAGTCATACTACAAAACAAAGGATGATTCCTCCTTTACATTTAAAATTATTATAATTAT AAATTCCTAGTAAGAATTGTTTTAGCGCGAAAGTTTCTCAAACACAATTTTATTCGTGTAAACTTAATCTATCAAACTTA ATTTTATCCAACAATAAAACAAACGAGTGGGCTCACAAAGGCTCCCCATTAGTATCCAATTGACATAGTAATGAGAAAAG AGAAATTGTGTTTGTACATTCGTTTCATACTTCTTTTTAATTTGTAAAATAGGGATATAAAGAGATGGGAGAAAAATATG GCATAATAGAATTGATGCAAAGAATATGATTTGAACTTCTGAGAACGTACGGTTTTAAGTGTGGCTTGTGTTAGCGTAGT CTATGACTTAACTTTAAAATTAGACTATGGATACATAGGTTTTATTTTCTTCTTTTATTTTCCCAGCCCAATGGTGGTGT CAAGGACTAAGATGATGTGTGGAGTTCTACCAGCTTGGTAATCCGCATCTTGAGTCGTTGGAGCCTGTTTGATCGGCGGG GATCGCGTTGACAGGTGAAATCAATGGCTGAAAATATATTTCTGTTGATATCTTTCTCACGGGAAGCCTCTAGGTTTGAT TGTTGAAAATAATTGTTACGATTGACTCCACGGTACTTTTTTTGTTATTTTCTTGAGTTAGTAGACATATGCGTTGGGGA TGGGAGGTCCAGGTGTCAACCCTGGAGGGTTGTAGTTTATCTTTCCAATGTAAAAAATCAACAATAAATAGTGTGTTTAA GTGTTTGTTAATTAAAGTGTGTTGCTATCATTTAAGAACTTAAGTATATTGTTAATCTTTGATTAATTTATGATTCAGGG TCAACTTTGTCCAAATTTGAAAGTGACACAAGCTTGGAAATACAGCCTAATTTTGGAATTTTTAGGGAAAGATGACAATA ACTCGAGATTACTAAAAAGGGTGAGCCAAACATGAATAATCAAGAAATCATTAATAAAGAGTCAAGAAACCAACTCAAAA TGATGGCTCATAGTTAACAAAAATACACAAGGTCGCTTGTTTAATTGACCTCATGCTTTCTTAGAAATAAATGCTGTTAA TAAATACTTATGAACAAAACAAAAAACATAACAAAATGCCAAAATCAGCTCTTTTGCCCCATCCTCTTTTCCTGAGTGCT ATATAGTTATGGTTGTTTGGTTGGAAAAAGATTGAGGTCTAGTCCAATGTTCATTCCGTTGAAAGCAATGGGAGCATACA TCCAGAGATCATCAGAGCTCAGAAGCTGTTCAATTGAAATCAAAATATGAGAAAACATGAATGAGTCTCAATATTTCAAA AAGTCTAATATGAAAATTATTTTTCACTGATCTTAAAATTAACTTGTTACCTTTATTTGGAGTTGTAAAAACTTCACATA TTGAACAGCTTCTTCAAGCATGGTGCTGATATCCACCTACAGTACAAAAGGAAGCAAGCTTGATAATTTTACCATCTTAA CCAATTGTTTTGATTTTTCACAACAGTTGGATTTGCATTAAGAAAGGTACCTTAGTTCCATTGGGGACTAGGTTTTGTAA GATTTTCAACCTTTCATTTATTTTTTCTCTTCTTCTCTGCATTACAAAAATGGAAAATTTCATGAGATCTAATTCACAGT TCACAGCACATGGAAAATATTATAAGATCATAAAATTATAGCCATGATATTTTGATGAAATACACTTGGCAGTTGGCACA ATACATACTCTTGCATAGATGCTCTGTGGGTCAGTAGCAGAACCTCTTTCAGATCTTGATTTACCCTTCAACTTAATAGT TGTAGAATCCTTCTGGTCCAAGCTTGAAGACCCTCCACCATTTAGCTCATTGGAGTCATCATCTTCTGAGCAGCAACTGC TCAAACTCTGCCCATGAAGACCAAGATTTCTATCCTCTTCAGTGTTGCTTGTAAAAGCAGATTTTGCTTTCTTCCTAGAT TTGACATTTGTCTTGTTCTTTTGAACCTATAAAATCATCAAATCGAAATTATCACATCAAGATGAGAACCACTTAAAATC AAACACATAAATTCATTCTTCAGGAAAAACATTATAAAGACAATTATTCATAAGCATCCGTACAATGCAAACACCCAACA GACACAGAGAGTGAGAAAATAAGAGGTCATGAATGTCGAGAGAGATATTGAGAAAATTTGGGTGTTTGCAAATCACTAGG ACTGGGAAGTAACATTATGTGATTTATGTAGAACCAAAAAATAAAAATGATGTGTTTTTCTACCTCCATTGCGCTCCTGG ATCTTTTTCCTGACTTTTCAAGATTGCTGGTTATATCCTCTTCTGGTGGTTCAGAAACTGGTTCTTCACATTGCTTGTGA GCCTTGTCACCAATAACCTCTTCATCAGAGTTTTCATTCCCTTGAACACTAAATGTGTTGAATTTGGCATCACCTATTGA CATGAAGCCAATGTTGGCTACCGGATCATCAAAGCAGCAATTGCCACCACTTGTAGTAGGAAACATGTTGCTACAATTAG TAATATTGGAGCTACTTCCTTGTGAAAAACCAAAAAAATTAGTCTCACTATTATTGGCATTTGCGTGAACATATGAACTG CAATTGATGCCTGTCACACTCATTATTGTTGATTCATGGCCAGACCATGATGCAGGTGGAATCTCCAAATTGTAATTTTC ATATTGGTGATCAGGGACTGAGCAGTTACTAAGCAACTGGCTCATGAAATCAGCTTCTTCAGCTGTGTAGAATCCACTGA GAGAACTCCATTCTTCAGAAGTTTGCTCCATTTTTCTTTCTTTTGTATGGATGGTTTTCTTTTTCAATGTGAGAAGAAAC TCCACTTTGTTTCAGTGCTTGAATGAGATCAATACCCTTACTCTATTT
CDS sequence (LotjaGi5g1v0322500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGAAGCTTCGGAGATTCTCGCTGGGTTTCCTTTTAGGGTTTCTGTTGTTGCTGTCGGTGACGCCGTCGTCAATGGC GAGATTTGTGGTGGAGAAGAACAGTTTGACGGTGACTTCGCCGGAGGATATCAAGGGTACCCACGATAGCGCGATTGGCA ACTTTGGGATTCCGCAGTACGGTGGTAGCATGGCTGGGAACGTTGTGTACCCCAAGGATAACCATAAGGGTTGTAAGGAG TTCGATGAGTCTGGGATTTCCTTTAAATCTAAGCCTGGAGCTCTTCCCACTATTGTTTTGCTCGATCGTGGAAATTGCTT CTTTGCTTTGAAGGTCTGGAATGCCCAGAAGGCTGGAGCTTCTGCTGTTCTTGTTGCGGATGATATTGAGGAAAAATTAA TTACCATGGACACGCCTGAAGAGGATGGATCATCTGCAAAATACATAGAGAACATAACAATACCATCAGCACTCATTGAA AAAAGCTTTGGTGAAAAATTAAAGAAGTCCATAAGTGGTGGGGAGATGGTCAATGTAAACCTTGATTGGAGGGAGGCTGT CCCCCACCCTGATGATCGTGTGGAATATGAGTTGTGGACCAACAGCAATGATGAGTGTGGAGTTAAATGTGATATGTTGA TGGAATTTGTGAAGGATTTCAAGGGTGCGGCTCAGATTTTAGAGAAAGGTGGATATACTCAGTTTACACCCCATTATATA ACTTGGTATTGTCCCAAGGCATTCACATTAAGCAAACAGTGCAAGTCCCAGTGCATAAATCATGGAAGATATTGCGCTCC AGATCCTGAGCAGGACTTTAGCACTGGTTATGATGGGAAAGATGTGGTTATTGAAAATTTAAGGCAGCTATGTGTTTATA AGGTGACAAGTGAAGCCAAAAAACCTTGGCTTTGGTGGGACTATGTTACTGATTTTCAAATTAGATGCCCAATGAAGGAG AAAAAGTACAACAAGAAATGTGCTGATGCTGTCATTGAATCACTAGGTCTTGATAATAAGAAGATTGAAAGGTGCATGGG AGATCCAGATGCTGATTCTGATAATCCTGTTTTGAAAGAAGAGCAAGATGCCCAAGTTGGGAAAGGATCCCGAGGTGATG TTACCATATTGCCTACTCTCGTAGTCAATAATCGACAATATCGAGGGAAATTAGAGAAAGGTGCTGTTATGAAAGCTATT TGTTCTGGTTTTGAAGAAACTACTGAACCAGCTGTTTGTTTGAGCAGTGATGTGGAGACAAATGAATGCTTGGAAAATAA TGGTGGTTGTTGGAAGGATAAGGCAGCTAACATCACTGCATGCAAGGATACTTTCCGTGGGCGAGTATGTGAGTGCCCCT TGGTGGATGGTGTGCAGTTCAAAGGAGATGGTTATACAACCTGCGAAGCTAGTGGACCTGGGCGATGCAAGATAAAGAAT GGAGGATGTTGGCATGAAGCCCGGAATGGACATGCATTTTCTGCTTGTGTGGACGATGGAGAAGTTAAATGCCAATGTCC TGCAGGGTTTAAAGGTGACGGTGTCAAAAATTGTCAAGACGTTGATGAATGTAAAGAGAAGAAAGCTTGCCAGTGCCCTG AATGTAGCTGCAAGAATACTTGGGGAAGCTATGACTGCAGTTGCAGTGGGGATCTTCTGTATATTAGGGACCATGATACC TGCATAAGTAAAACTGCTAGTCAAGGAGGAAGATCTGCTTGGGCTGCTTTTTGGGTCATTATAGCTGGCTTAGTTCTATC TGCTGGTGGGGGATACCTTATATACAAATACAGAATAAGGTCATATATGGATTCAGAAATCAGAGCCATCATGGCACAGT ACATGCCCTTGGACAGTCAAGCAGAAGTTGTAAATCATGTGAACGATGAAAGAGCATGA
Protein sequence (LotjaGi5g1v0322500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMKLRRFSLGFLLGFLLLLSVTPSSMARFVVEKNSLTVTSPEDIKGTHDSAIGNFGIPQYGGSMAGNVVYPKDNHKGCKE FDESGISFKSKPGALPTIVLLDRGNCFFALKVWNAQKAGASAVLVADDIEEKLITMDTPEEDGSSAKYIENITIPSALIE KSFGEKLKKSISGGEMVNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLMEFVKDFKGAAQILEKGGYTQFTPHYI TWYCPKAFTLSKQCKSQCINHGRYCAPDPEQDFSTGYDGKDVVIENLRQLCVYKVTSEAKKPWLWWDYVTDFQIRCPMKE KKYNKKCADAVIESLGLDNKKIERCMGDPDADSDNPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQYRGKLEKGAVMKAI CSGFEETTEPAVCLSSDVETNECLENNGGCWKDKAANITACKDTFRGRVCECPLVDGVQFKGDGYTTCEASGPGRCKIKN GGCWHEARNGHAFSACVDDGEVKCQCPAGFKGDGVKNCQDVDECKEKKACQCPECSCKNTWGSYDCSCSGDLLYIRDHDT CISKTASQGGRSAWAAFWVIIAGLVLSAGGGYLIYKYRIRSYMDSEIRAIMAQYMPLDSQAEVVNHVNDERA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 27 | 27 | - | – | |
| SignalP_EUK | 1 | 27 | 27 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| Phobius | 1 | 27 | 27 | - | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| Phobius | 8 | 19 | 12 | - | – | |
| Phobius | 20 | 27 | 8 | - | – | |
| Gene3D | 26 | 190 | 165 | 1.0E-56 | – | |
| Phobius | 28 | 572 | 545 | - | – | |
| PANTHER | 29 | 626 | 598 | 7.5E-256 | – | |
| PANTHER | 29 | 626 | 598 | 7.5E-256 | – | |
| SUPERFAMILY | 35 | 174 | 140 | 1.96E-9 | – | |
| CDD | 54 | 181 | 128 | 1.53047E-73 | – | |
| Pfam | 66 | 167 | 102 | 4.1E-12 | ||
| Gene3D | 474 | 554 | 81 | 8.3E-9 | – | |
| Pfam | 503 | 523 | 21 | 3.4E-7 | ||
| CDD | 520 | 548 | 29 | 7.066E-4 | – | |
| SMART | 520 | 562 | 43 | 0.0064 | ||
| ProSitePatterns | 520 | 546 | 27 | - | ||
| TMHMM | 573 | 595 | 23 | - | – | |
| Phobius | 573 | 595 | 23 | - | – | |
| Phobius | 596 | 632 | 37 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). |
Expression pattern of LotjaGi5g1v0322500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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