Domain Predictions — View

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PF13771

Source: Pfam

Description

PHD-like zinc-binding domain

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 8

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0294399.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Cicer arietinum] gi\|502110153\|ref\|XP_004493812.1\|	Domains G3DSA:3.30.40.10 G3DSA:3.40.50.10190 IPR001357 IPR001841 IPR013083 IPR017907 IPR031099 PF00533 PF13771 PF13920 PF16589 PS00518 PS50089 PS50172 PTHR13763 SM00184 SM00292 SSF52113 SSF57850 cd00027 cd00162 mobidb-lite	22
Lj1g3v4515780.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Cicer arietinum] gi\|502110153\|ref\|XP_004493812.1\|	Domains IPR031099 PF13771 PTHR13763 mobidb-lite	4
Lj3g3v0428950.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana] gi\|15232498\|ref\|NP_188130.1\|	Domains Coil G3DSA:1.10.8.60 G3DSA:3.40.50.300 IPR003593 IPR003959 IPR003960 IPR027417 PF00004 PF13771 PS00674 PTHR23069 PTHR23069:SF3 SM00382 SSF52540 cd00009 mobidb-lite	16
Lj3g3v0428950.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana] gi\|15232498\|ref\|NP_188130.1\|	Domains G3DSA:1.10.8.60 G3DSA:3.40.50.300 IPR003593 IPR003959 IPR003960 IPR027417 PF00004 PF13771 PS00674 PTHR23069 PTHR23069:SF3 SM00382 SSF52540 cd00009 mobidb-lite	15
Lj6g3v1946520.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Glycine max] gi\|356557797\|ref\|XP_003547197.1\|	Domains G3DSA:3.40.50.10190 IPR001357 IPR001965 IPR031099 PF00533 PF13771 PS50172 PTHR13763 PTHR13763:SF1 SM00249 SM00292 SSF52113 cd00027 mobidb-lite	14
LotjaGi1g1v0705900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Breast cancer associated RING 1; TAIR: AT1G04020.1 breast cancer associated RING 1; Swiss-Prot: sp\|F4I443\|BARD1_ARATH BRCA1-associated RING domain protein 1; TrEMBL-Plants: tr\|A0A0B2PNV8\|A0A0B2PNV8_GLYSO Protein BREAST CANCER SUSCEPTIBILITY 1 like; Found in the gene: LotjaGi1g1v0705900	Domains G3DSA:3.30.40.10 G3DSA:3.40.50.10190 IPR001357 IPR001841 IPR013083 IPR017907 IPR031099 IPR034732 IPR036420 PF00533 PF13771 PF13920 PF16589 PS00518 PS50089 PS50172 PS51805 PTHR13763 PTHR13763:SF9 SM00184 SM00292 SSF52113 SSF57850 cd16449 cd17720 cd17734 mobidb-lite	27
LotjaGi3g1v0044400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent zinc metalloprotease FtsH; TAIR: AT3G15120.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp\|P40340\|TBP7_YEAST Tat-binding homolog 7; TrEMBL-Plants: tr\|A0A0B2R803\|A0A0B2R803_GLYSO Tat-binding like 7; Found in the gene: LotjaGi3g1v0044400	Domains Coil G3DSA:1.10.8.60 G3DSA:3.30.40.10 G3DSA:3.40.50.300 IPR003593 IPR003959 IPR003960 IPR013083 IPR027417 IPR034732 IPR041569 PF00004 PF13771 PF17862 PS00674 PS51805 PTHR23069 PTHR23069:SF7 SM00382 SSF52540 cd00009 mobidb-lite	22
LotjaGi6g1v0312100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Breast cancer associated RING 1; TAIR: AT4G21070.1 breast cancer susceptibility1; Swiss-Prot: sp\|Q8RXD4\|BRCA1_ARATH Protein BREAST CANCER SUSCEPTIBILITY 1 homolog; TrEMBL-Plants: tr\|V7BPN4\|V7BPN4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0312100_LC	Domains Coil G3DSA:3.30.40.10 G3DSA:3.40.50.10190 IPR001357 IPR001841 IPR001965 IPR011364 IPR013083 IPR017907 IPR031099 IPR034732 IPR036420 PF00533 PF13771 PF13923 PS00518 PS50089 PS50172 PS51805 PTHR13763 PTHR13763:SF0 SM00184 SM00249 SM00292 SSF52113 SSF57850 cd15571 cd17720 cd17734 mobidb-lite	30

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	12.50