Domain Predictions — View

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cd15571

Source: CDD

Description

ePHD

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 6

Transcript	Name	Description	Predicted domains	Domain count
Lj6g3v1604030.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: protein AF-17-like isoform X2 [Cicer arietinum] gi\|502166098\|ref\|XP_004513789.1\|	Domains G3DSA:3.30.40.10 IPR001965 IPR011011 IPR013083 IPR019786 IPR019787 PF00628 PF13832 PS01359 PS50016 PTHR13793 SM00249 SSF57903 cd15492 cd15571 mobidb-lite	16
Lj6g3v1604030.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: protein AF-17-like isoform X1 [Cicer arietinum] gi\|502166095\|ref\|XP_004513788.1\|	Domains G3DSA:3.30.40.10 IPR001965 IPR011011 IPR013083 IPR019786 IPR019787 PF00628 PF13832 PS01359 PS50016 PTHR13793 SM00249 SSF57903 cd15492 cd15571 mobidb-lite	16
LotjaGi1g1v0249800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phd finger protein, putative; TAIR: AT1G77800.1 PHD finger family protein; Swiss-Prot: sp\|Q7YZH1\|RNO_DROME PHD finger protein rhinoceros; TrEMBL-Plants: tr\|A0A0R0KNZ6\|A0A0R0KNZ6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0249800	Domains Coil G3DSA:3.30.40.10 IPR001965 IPR002219 IPR011011 IPR013083 IPR019786 IPR019787 IPR034732 NON_CYTOPLASMIC_DOMAIN PF13831 PF13832 PS01359 PS50016 PS50081 PS51805 PTHR13793 PTHR13793:SF96 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00249 SSF57903 SignalP-noTM cd15571 mobidb-lite	27
LotjaGi3g1v0038900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Histone-lysine N-methyltransferase; TAIR: AT3G14740.2 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp\|O54826\|AF10_MOUSE Protein AF-10; TrEMBL-Plants: tr\|A0A1J7H9J1\|A0A1J7H9J1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0038900	Domains G3DSA:3.30.40.10 IPR001965 IPR011011 IPR013083 IPR019786 IPR019787 IPR034732 PF00628 PF13832 PS01359 PS50016 PS51805 PTHR13793 PTHR13793:SF107 SM00249 SSF57903 cd15492 cd15571 mobidb-lite	19
LotjaGi3g1v0038900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Histone-lysine N-methyltransferase; TAIR: AT3G14740.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp\|P55197\|AF10_HUMAN Protein AF-10; TrEMBL-Plants: tr\|A0A1J7H9J1\|A0A1J7H9J1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0038900	Domains G3DSA:3.30.40.10 IPR001965 IPR011011 IPR013083 IPR019786 IPR019787 IPR034732 PF00628 PF13832 PS01359 PS50016 PS51805 PTHR13793 PTHR13793:SF107 SM00249 SSF57903 cd15492 cd15571 mobidb-lite	19
LotjaGi6g1v0312100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Breast cancer associated RING 1; TAIR: AT4G21070.1 breast cancer susceptibility1; Swiss-Prot: sp\|Q8RXD4\|BRCA1_ARATH Protein BREAST CANCER SUSCEPTIBILITY 1 homolog; TrEMBL-Plants: tr\|V7BPN4\|V7BPN4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0312100_LC	Domains Coil G3DSA:3.30.40.10 G3DSA:3.40.50.10190 IPR001357 IPR001841 IPR001965 IPR011364 IPR013083 IPR017907 IPR031099 IPR034732 IPR036420 PF00533 PF13771 PF13923 PS00518 PS50089 PS50172 PS51805 PTHR13763 PTHR13763:SF0 SM00184 SM00249 SM00292 SSF52113 SSF57850 cd15571 cd17720 cd17734 mobidb-lite	30

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	16.67